RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 PAX7P23759 505 aa16.62■□□□□ 0.25
PTCH1-201ENST00000331920 CNTFP26441 200 aa16.62■□□□□ 0.25
PTCH1-201ENST00000331920 MAN2A2P49641 1150 aa16.62■□□□□ 0.25
PTCH1-201ENST00000331920 ITIH5Q86UX2 942 aa16.62■□□□□ 0.25
PTCH1-201ENST00000331920 OR10G6Q8NH81 332 aa16.62■□□□□ 0.25
PTCH1-201ENST00000331920 MAGEC3Q8TD91 643 aa16.62■□□□□ 0.25
PTCH1-201ENST00000331920 PTCD2Q8WV60 388 aaKnown RBP16.62■□□□□ 0.25
PTCH1-201ENST00000331920 FCRL4Q96PJ5 515 aa16.62■□□□□ 0.25
PTCH1-201ENST00000331920 TBX20Q9UMR3 447 aa16.62■□□□□ 0.25
PTCH1-201ENST00000331920 TIMM13Q9Y5L4 95 aaPredicted RBP16.62■□□□□ 0.25
PTCH1-201ENST00000331920 PREPLQ4J6C6 727 aaPredicted RBP16.61■□□□□ 0.25
PTCH1-201ENST00000331920 METTL21CQ5VZV1 264 aa16.61■□□□□ 0.25
PTCH1-201ENST00000331920 FBXL19Q6PCT2 694 aa16.61■□□□□ 0.25
PTCH1-201ENST00000331920 ADAM32Q8TC27 787 aa16.61■□□□□ 0.25
PTCH1-201ENST00000331920 TAS2R13Q9NYV9 303 aa16.61■□□□□ 0.25
PTCH1-201ENST00000331920 PALLDQ8WX93 1383 aa16.61■□□□□ 0.25
PTCH1-201ENST00000331920 PTPN4P29074 926 aa16.61■□□□□ 0.25
PTCH1-201ENST00000331920 GALNT3Q14435 633 aa16.61■□□□□ 0.25
PTCH1-201ENST00000331920 A0A087WZ62 844 aa16.61■□□□□ 0.25
PTCH1-201ENST00000331920 HBP1O60381 514 aa16.61■□□□□ 0.25
PTCH1-201ENST00000331920 CD151P48509 253 aa16.61■□□□□ 0.25
PTCH1-201ENST00000331920 BOLA3Q53S33 107 aa16.61■□□□□ 0.25
PTCH1-201ENST00000331920 PIK3R6Q5UE93 754 aa16.61■□□□□ 0.25
PTCH1-201ENST00000331920 ZNF366Q8N895 744 aa16.61■□□□□ 0.25
PTCH1-201ENST00000331920 SLC4A11Q8NBS3 891 aa16.61■□□□□ 0.25
PTCH1-201ENST00000331920 GPRC5AQ8NFJ5 357 aa16.61■□□□□ 0.25
PTCH1-201ENST00000331920 SGCDQ92629 289 aa16.61■□□□□ 0.25
PTCH1-201ENST00000331920 GNPTGQ9UJJ9 305 aa16.61■□□□□ 0.25
PTCH1-201ENST00000331920 A0A0A6YYK5 440 aaPredicted RBP16.61■□□□□ 0.25
PTCH1-201ENST00000331920 MGAT1P26572 445 aa16.61■□□□□ 0.25
PTCH1-201ENST00000331920 FXR1P51114 621 aaKnown RBP eCLIP16.61■□□□□ 0.25
PTCH1-201ENST00000331920 TBC1D25Q3MII6 688 aa16.61■□□□□ 0.25
PTCH1-201ENST00000331920 IQSEC1Q6DN90 963 aa16.61■□□□□ 0.25
PTCH1-201ENST00000331920 METTL16Q86W50 562 aaKnown RBP16.61■□□□□ 0.25
PTCH1-201ENST00000331920 NAT14Q8WUY8 206 aa16.61■□□□□ 0.25
PTCH1-201ENST00000331920 Q96MT0 163 aa16.61■□□□□ 0.25
PTCH1-201ENST00000331920 ERBB4Q15303 1308 aa16.61■□□□□ 0.25
PTCH1-201ENST00000331920 DCDC2CA8MYV0 355 aa16.61■□□□□ 0.25
PTCH1-201ENST00000331920 THP07101 528 aa16.61■□□□□ 0.25
PTCH1-201ENST00000331920 MAPK7Q13164 816 aa16.61■□□□□ 0.25
PTCH1-201ENST00000331920 USP41Q3LFD5 358 aa16.61■□□□□ 0.25
PTCH1-201ENST00000331920 BHLHB9Q6PI77 547 aa16.61■□□□□ 0.25
PTCH1-201ENST00000331920 RNF31Q96EP0 1072 aa16.61■□□□□ 0.25
PTCH1-201ENST00000331920 OAS3Q9Y6K5 1087 aaKnown RBP16.61■□□□□ 0.25
PTCH1-201ENST00000331920 LOC110117498-PIK3R3F6TDL0 507 aa16.61■□□□□ 0.25
PTCH1-201ENST00000331920 RBAK-RBAKDNI3L0D1 243 aa16.61■□□□□ 0.25
PTCH1-201ENST00000331920 ZNF7P17097 686 aaPredicted RBP16.61■□□□□ 0.25
PTCH1-201ENST00000331920 KCNA5P22460 613 aa16.61■□□□□ 0.25
PTCH1-201ENST00000331920 PDK2Q15119 407 aa16.61■□□□□ 0.25
PTCH1-201ENST00000331920 MARC1Q5VT66 337 aa16.61■□□□□ 0.25
PTCH1-201ENST00000331920 MARCH7Q9H992 704 aa16.61■□□□□ 0.25
PTCH1-201ENST00000331920 ABCB9Q9NP78 766 aa16.61■□□□□ 0.25
PTCH1-201ENST00000331920 WHRNQ9P202 907 aa16.61■□□□□ 0.25
PTCH1-201ENST00000331920 ARHGEF33A8MVX0 844 aa16.6■□□□□ 0.25
PTCH1-201ENST00000331920 CCR1P32246 355 aa16.6■□□□□ 0.25
PTCH1-201ENST00000331920 SEPT12Q8IYM1 358 aa16.6■□□□□ 0.25
PTCH1-201ENST00000331920 RASGEF1AQ8N9B8 481 aa16.6■□□□□ 0.25
PTCH1-201ENST00000331920 B3GALT6Q96L58 329 aa16.6■□□□□ 0.25
PTCH1-201ENST00000331920 L1RE1Q9UN81 338 aa16.6■□□□□ 0.25
PTCH1-201ENST00000331920 FAM86B1E9PN63 330 aa16.6■□□□□ 0.25
PTCH1-201ENST00000331920 CHRNA5P30532 468 aa16.6■□□□□ 0.25
PTCH1-201ENST00000331920 BCAT1P54687 386 aa16.6■□□□□ 0.25
PTCH1-201ENST00000331920 PFKFB4Q16877 469 aa16.6■□□□□ 0.25
PTCH1-201ENST00000331920 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.6■□□□□ 0.25
PTCH1-201ENST00000331920 CROCCP3Q8IVE0 287 aa16.6■□□□□ 0.25
PTCH1-201ENST00000331920 C7orf25Q9BPX7 421 aa16.6■□□□□ 0.25
PTCH1-201ENST00000331920 TTLL2Q9BWV7 592 aa16.6■□□□□ 0.25
PTCH1-201ENST00000331920 PXMP2Q9NR77 195 aa16.6■□□□□ 0.25
PTCH1-201ENST00000331920 MRASO14807 208 aa16.6■□□□□ 0.25
PTCH1-201ENST00000331920 FAUP35544 74 aaKnown RBP16.6■□□□□ 0.25
PTCH1-201ENST00000331920 SP140Q13342 867 aa16.6■□□□□ 0.25
PTCH1-201ENST00000331920 CRY1Q16526 586 aa16.6■□□□□ 0.25
PTCH1-201ENST00000331920 GRTP1Q5TC63 336 aa16.6■□□□□ 0.25
PTCH1-201ENST00000331920 B3GNT6Q6ZMB0 384 aa16.6■□□□□ 0.25
PTCH1-201ENST00000331920 SLC47A2Q86VL8 602 aa16.6■□□□□ 0.25
PTCH1-201ENST00000331920 ZZZ3Q8IYH5 903 aa16.6■□□□□ 0.25
PTCH1-201ENST00000331920 MLXQ9UH92 298 aa16.6■□□□□ 0.25
PTCH1-201ENST00000331920 CBFA2T3O75081 653 aa16.6■□□□□ 0.25
PTCH1-201ENST00000331920 CELF2O95319 508 aaKnown RBP16.6■□□□□ 0.25
PTCH1-201ENST00000331920 AP2S1P53680 142 aaPredicted RBP16.6■□□□□ 0.25
PTCH1-201ENST00000331920 MBTD1Q05BQ5 628 aa16.6■□□□□ 0.25
PTCH1-201ENST00000331920 RIPK1Q13546 671 aa16.6■□□□□ 0.25
PTCH1-201ENST00000331920 GFOD2Q3B7J2 385 aa16.6■□□□□ 0.25
PTCH1-201ENST00000331920 PEX5LQ8IYB4 626 aa16.6■□□□□ 0.25
PTCH1-201ENST00000331920 NOA1Q8NC60 698 aaKnown RBP16.6■□□□□ 0.25
PTCH1-201ENST00000331920 RP9Q8TA86 221 aaKnown RBP16.6■□□□□ 0.25
PTCH1-201ENST00000331920 EVA1BQ9NVM1 165 aa16.6■□□□□ 0.25
PTCH1-201ENST00000331920 FFAR3O14843 346 aa16.6■□□□□ 0.25
PTCH1-201ENST00000331920 OGTO15294 1046 aa16.6■□□□□ 0.25
PTCH1-201ENST00000331920 GPR42O15529 346 aa16.6■□□□□ 0.25
PTCH1-201ENST00000331920 POLR2EP19388 210 aaKnown RBP16.6■□□□□ 0.25
PTCH1-201ENST00000331920 GRIA3P42263 894 aa16.6■□□□□ 0.25
PTCH1-201ENST00000331920 UGT2B15P54855 530 aa16.6■□□□□ 0.25
PTCH1-201ENST00000331920 SPATA20Q8TB22 786 aa16.6■□□□□ 0.25
PTCH1-201ENST00000331920 HTRA1Q92743 480 aa16.6■□□□□ 0.25
PTCH1-201ENST00000331920 CDH9Q9ULB4 789 aa16.6■□□□□ 0.25
PTCH1-201ENST00000331920 RHOBTB3O94955 611 aa16.6■□□□□ 0.25
PTCH1-201ENST00000331920 KLRC1P26715 233 aa16.6■□□□□ 0.25
PTCH1-201ENST00000331920 FAM187BQ17R55 369 aa16.6■□□□□ 0.25
PTCH1-201ENST00000331920 ZNF470Q6ECI4 717 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms