RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 PTP4A2Q12974 167 aa4.8□□□□□ -1.64
CCDC54-201ENST00000261058 GPR68Q15743 365 aa4.8□□□□□ -1.64
CCDC54-201ENST00000261058 TTC39AQ5SRH9 613 aa4.8□□□□□ -1.64
CCDC54-201ENST00000261058 ACAD10Q6JQN1 1059 aa4.8□□□□□ -1.64
CCDC54-201ENST00000261058 INO80CQ6PI98 192 aaPredicted RBP4.8□□□□□ -1.64
CCDC54-201ENST00000261058 CYB5R4Q7L1T6 521 aa4.8□□□□□ -1.64
CCDC54-201ENST00000261058 KDELC2Q7Z4H8 507 aa4.8□□□□□ -1.64
CCDC54-201ENST00000261058 ADGRG6Q86SQ4 1221 aa4.8□□□□□ -1.64
CCDC54-201ENST00000261058 MON1AQ86VX9 555 aa4.8□□□□□ -1.64
CCDC54-201ENST00000261058 DDB2Q92466 427 aa4.8□□□□□ -1.64
CCDC54-201ENST00000261058 MSI2Q96DH6 328 aaKnown RBP4.8□□□□□ -1.64
CCDC54-201ENST00000261058 APOPT1Q96IL0 206 aa4.8□□□□□ -1.64
CCDC54-201ENST00000261058 TEFMQ96QE5 360 aaKnown RBP4.8□□□□□ -1.64
CCDC54-201ENST00000261058 CRAMP1Q96RY5 1269 aa4.8□□□□□ -1.64
CCDC54-201ENST00000261058 WDR83Q9BRX9 315 aaKnown RBP4.8□□□□□ -1.64
CCDC54-201ENST00000261058 TUBB6Q9BUF5 446 aa4.8□□□□□ -1.64
CCDC54-201ENST00000261058 SLC26A6Q9BXS9 759 aa4.8□□□□□ -1.64
CCDC54-201ENST00000261058 INTS2Q9H0H0 1204 aaKnown RBP4.8□□□□□ -1.64
CCDC54-201ENST00000261058 TMEM45AQ9NWC5 275 aa4.8□□□□□ -1.64
CCDC54-201ENST00000261058 ZDHHC7Q9NXF8 308 aa4.8□□□□□ -1.64
CCDC54-201ENST00000261058 PPP1R14DQ9NXH3 145 aa4.8□□□□□ -1.64
CCDC54-201ENST00000261058 ALKBH4Q9NXW9 302 aa4.8□□□□□ -1.64
CCDC54-201ENST00000261058 GRHL1Q9NZI5 618 aa4.8□□□□□ -1.64
CCDC54-201ENST00000261058 SLC8A2Q9UPR5 921 aa4.8□□□□□ -1.64
CCDC54-201ENST00000261058 A0A0A0MQY5 61 aa4.8□□□□□ -1.64
CCDC54-201ENST00000261058 C17orf113A0A1B0GUU1 675 aa4.8□□□□□ -1.64
CCDC54-201ENST00000261058 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.8□□□□□ -1.64
CCDC54-201ENST00000261058 PER2O15055 1255 aa4.8□□□□□ -1.64
CCDC54-201ENST00000261058 CD4P01730 458 aa4.8□□□□□ -1.64
CCDC54-201ENST00000261058 PRR35P0CG20 571 aa4.8□□□□□ -1.64
CCDC54-201ENST00000261058 HOXD9P28356 352 aaPredicted RBP4.8□□□□□ -1.64
CCDC54-201ENST00000261058 PTPN9P43378 593 aa4.8□□□□□ -1.64
CCDC54-201ENST00000261058 ID2Q02363 134 aa4.8□□□□□ -1.64
CCDC54-201ENST00000261058 SIM2Q14190 667 aaPredicted RBP4.8□□□□□ -1.64
CCDC54-201ENST00000261058 NFIL3Q16649 462 aa4.8□□□□□ -1.64
CCDC54-201ENST00000261058 PIK3CD-AS1Q5SR53 167 aa4.8□□□□□ -1.64
CCDC54-201ENST00000261058 UBAP2Q5T6F2 1119 aaKnown RBP4.8□□□□□ -1.64
CCDC54-201ENST00000261058 C10orf25Q5T742 122 aa4.8□□□□□ -1.64
CCDC54-201ENST00000261058 H1FNTQ75WM6 255 aaPredicted RBP4.8□□□□□ -1.64
CCDC54-201ENST00000261058 PIP4P1Q86T03 277 aa4.8□□□□□ -1.64
CCDC54-201ENST00000261058 ADGRF4Q8IZF3 695 aa4.8□□□□□ -1.64
CCDC54-201ENST00000261058 NME8Q8N427 588 aa4.8□□□□□ -1.64
CCDC54-201ENST00000261058 TCP11L2Q8N4U5 519 aa4.8□□□□□ -1.64
CCDC54-201ENST00000261058 TNIP2Q8NFZ5 429 aa4.8□□□□□ -1.64
CCDC54-201ENST00000261058 PIGOQ8TEQ8 1089 aa4.8□□□□□ -1.64
CCDC54-201ENST00000261058 FAR1Q8WVX9 515 aa4.8□□□□□ -1.64
CCDC54-201ENST00000261058 RUFY2Q8WXA3 655 aa4.8□□□□□ -1.64
CCDC54-201ENST00000261058 CNOT9Q92600 299 aaKnown RBP4.8□□□□□ -1.64
CCDC54-201ENST00000261058 ZUFSPQ96AP4 578 aa4.8□□□□□ -1.64
CCDC54-201ENST00000261058 EYA3Q99504 573 aa4.8□□□□□ -1.64
CCDC54-201ENST00000261058 SCNM1Q9BWG6 230 aa4.8□□□□□ -1.64
CCDC54-201ENST00000261058 HIPK3Q9H422 1215 aa4.8□□□□□ -1.64
CCDC54-201ENST00000261058 ATP8A2Q9NTI2 1148 aa4.8□□□□□ -1.64
CCDC54-201ENST00000261058 UTS2RQ9UKP6 389 aa4.8□□□□□ -1.64
CCDC54-201ENST00000261058 LAS1LQ9Y4W2 734 aaKnown RBP4.8□□□□□ -1.64
CCDC54-201ENST00000261058 A0A1W2PQM1 296 aa4.79□□□□□ -1.64
CCDC54-201ENST00000261058 RHODO00212 210 aa4.79□□□□□ -1.64
CCDC54-201ENST00000261058 UGDHO60701 494 aa4.79□□□□□ -1.64
CCDC54-201ENST00000261058 ATG13O75143 517 aa4.79□□□□□ -1.64
CCDC54-201ENST00000261058 TMEM63AO94886 807 aa4.79□□□□□ -1.64
CCDC54-201ENST00000261058 SERPINC1P01008 464 aa4.79□□□□□ -1.64
CCDC54-201ENST00000261058 URODP06132 367 aa4.79□□□□□ -1.64
CCDC54-201ENST00000261058 KELP23276 732 aa4.79□□□□□ -1.64
CCDC54-201ENST00000261058 CPA2P48052 419 aa4.79□□□□□ -1.64
CCDC54-201ENST00000261058 RXRGP48443 463 aa4.79□□□□□ -1.64
CCDC54-201ENST00000261058 CYP2J2P51589 502 aa4.79□□□□□ -1.64
CCDC54-201ENST00000261058 C21orf58P58505 322 aa4.79□□□□□ -1.64
CCDC54-201ENST00000261058 NAA25Q14CX7 972 aa4.79□□□□□ -1.64
CCDC54-201ENST00000261058 FBXO43Q4G163 708 aa4.79□□□□□ -1.64
CCDC54-201ENST00000261058 MORN5Q5VZ52 161 aa4.79□□□□□ -1.64
CCDC54-201ENST00000261058 AAGABQ6PD74 315 aa4.79□□□□□ -1.64
CCDC54-201ENST00000261058 TRIM74Q86UV6 250 aa4.79□□□□□ -1.64
CCDC54-201ENST00000261058 TRIM73Q86UV7 250 aa4.79□□□□□ -1.64
CCDC54-201ENST00000261058 ACTR5Q9H9F9 607 aaPredicted RBP4.79□□□□□ -1.64
CCDC54-201ENST00000261058 THSD1Q9NS62 852 aa4.79□□□□□ -1.64
CCDC54-201ENST00000261058 RNF146Q9NTX7 359 aa4.79□□□□□ -1.64
CCDC54-201ENST00000261058 TMEM184CQ9NVA4 438 aa4.79□□□□□ -1.64
CCDC54-201ENST00000261058 NLKQ9UBE8 527 aa4.79□□□□□ -1.64
CCDC54-201ENST00000261058 BTBD3Q9Y2F9 522 aa4.79□□□□□ -1.64
CCDC54-201ENST00000261058 ZMYM2Q9UBW7 1377 aa4.78□□□□□ -1.64
CCDC54-201ENST00000261058 ZNF804BA4D1E1 1349 aa4.78□□□□□ -1.64
CCDC54-201ENST00000261058 KDM3AQ9Y4C1 1321 aa4.78□□□□□ -1.64
CCDC54-201ENST00000261058 DPPA5A6NC42 116 aa4.78□□□□□ -1.64
CCDC54-201ENST00000261058 ZNF814B7Z6K7 855 aa4.78□□□□□ -1.64
CCDC54-201ENST00000261058 STRNO43815 780 aa4.78□□□□□ -1.64
CCDC54-201ENST00000261058 MBD4O95243 580 aa4.78□□□□□ -1.64
CCDC54-201ENST00000261058 ADAP00813 363 aa4.78□□□□□ -1.64
CCDC54-201ENST00000261058 PTMSP20962 102 aa4.78□□□□□ -1.64
CCDC54-201ENST00000261058 KRT9P35527 623 aa4.78□□□□□ -1.64
CCDC54-201ENST00000261058 GGT5P36269 586 aa4.78□□□□□ -1.64
CCDC54-201ENST00000261058 BLKP51451 505 aa4.78□□□□□ -1.64
CCDC54-201ENST00000261058 CASP6P55212 293 aa4.78□□□□□ -1.64
CCDC54-201ENST00000261058 RPP30P78346 268 aaKnown RBP4.78□□□□□ -1.64
CCDC54-201ENST00000261058 ZNF91Q05481 1191 aa4.78□□□□□ -1.64
CCDC54-201ENST00000261058 SRSF4Q08170 494 aaKnown RBP4.78□□□□□ -1.64
CCDC54-201ENST00000261058 TRIP6Q15654 476 aaKnown RBP4.78□□□□□ -1.64
CCDC54-201ENST00000261058 MAPRE1Q15691 268 aaKnown RBP4.78□□□□□ -1.64
CCDC54-201ENST00000261058 SLC4A8Q2Y0W8 1093 aa4.78□□□□□ -1.64
CCDC54-201ENST00000261058 Q4G0T1 1027 aa4.78□□□□□ -1.64
CCDC54-201ENST00000261058 SYTL3Q4VX76 610 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms