RNA–Protein interactions for RNA: ENST00000565639.6

PKD1-230, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 1,976 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-230ENST00000565639 PRPSAP1Q14558 356 aa19.7■□□□□ 0.74
PKD1-230ENST00000565639 LRRC8BQ6P9F7 803 aa19.7■□□□□ 0.74
PKD1-230ENST00000565639 FAM217AQ8IXS0 508 aa19.7■□□□□ 0.74
PKD1-230ENST00000565639 GORASP1Q9BQQ3 440 aa19.7■□□□□ 0.74
PKD1-230ENST00000565639 LMAN2LQ9H0V9 348 aa19.7■□□□□ 0.74
PKD1-230ENST00000565639 VPS37BQ9H9H4 285 aa19.7■□□□□ 0.74
PKD1-230ENST00000565639 GOLGA6AQ9NYA3 693 aa19.7■□□□□ 0.74
PKD1-230ENST00000565639 VPS18Q9P253 973 aa19.7■□□□□ 0.74
PKD1-230ENST00000565639 CCDC85CA6NKD9 419 aa19.7■□□□□ 0.74
PKD1-230ENST00000565639 POLR3GO15318 223 aaPredicted RBP19.7■□□□□ 0.74
PKD1-230ENST00000565639 PSMD3O43242 534 aa19.7■□□□□ 0.74
PKD1-230ENST00000565639 AVILO75366 819 aa19.7■□□□□ 0.74
PKD1-230ENST00000565639 SPAG6O75602 509 aa19.7■□□□□ 0.74
PKD1-230ENST00000565639 PEX11BO96011 259 aa19.7■□□□□ 0.74
PKD1-230ENST00000565639 RENBPP51606 427 aa19.7■□□□□ 0.74
PKD1-230ENST00000565639 RPS24P62847 133 aaKnown RBP19.7■□□□□ 0.74
PKD1-230ENST00000565639 IL10RBQ08334 325 aa19.7■□□□□ 0.74
PKD1-230ENST00000565639 KCTD11Q693B1 232 aa19.7■□□□□ 0.74
PKD1-230ENST00000565639 HTR3DQ70Z44 454 aa19.7■□□□□ 0.74
PKD1-230ENST00000565639 SETD3Q86TU7 594 aaPredicted RBP19.7■□□□□ 0.74
PKD1-230ENST00000565639 PALM2Q8IXS6 379 aa19.7■□□□□ 0.74
PKD1-230ENST00000565639 SHKBP1Q8TBC3 707 aa19.7■□□□□ 0.74
PKD1-230ENST00000565639 PBX4Q9BYU1 374 aa19.7■□□□□ 0.74
PKD1-230ENST00000565639 SP110Q9HB58 689 aa19.7■□□□□ 0.74
PKD1-230ENST00000565639 HCFC1R1Q9NWW0 138 aa19.7■□□□□ 0.74
PKD1-230ENST00000565639 DNMT3BQ9UBC3 853 aaKnown RBP19.7■□□□□ 0.74
PKD1-230ENST00000565639 MYO7AQ13402 2215 aa19.7■□□□□ 0.74
PKD1-230ENST00000565639 GFRA2O00451 464 aa19.69■□□□□ 0.74
PKD1-230ENST00000565639 PBX2P40425 430 aa19.69■□□□□ 0.74
PKD1-230ENST00000565639 CCR2P41597 374 aa19.69■□□□□ 0.74
PKD1-230ENST00000565639 GPX6P59796 221 aa19.69■□□□□ 0.74
PKD1-230ENST00000565639 TNK2Q07912 1038 aa19.69■□□□□ 0.74
PKD1-230ENST00000565639 RAB30Q15771 203 aa19.69■□□□□ 0.74
PKD1-230ENST00000565639 USP33Q8TEY7 942 aa19.69■□□□□ 0.74
PKD1-230ENST00000565639 FCRL5Q96RD9 977 aa19.69■□□□□ 0.74
PKD1-230ENST00000565639 GDF15Q99988 308 aa19.69■□□□□ 0.74
PKD1-230ENST00000565639 SLC46A2Q9BY10 475 aa19.69■□□□□ 0.74
PKD1-230ENST00000565639 CENPHQ9H3R5 247 aa19.69■□□□□ 0.74
PKD1-230ENST00000565639 PPCSQ9HAB8 311 aa19.69■□□□□ 0.74
PKD1-230ENST00000565639 GLOD4Q9HC38 313 aa19.69■□□□□ 0.74
PKD1-230ENST00000565639 RBM22Q9NW64 420 aaKnown RBP eCLIP19.69■□□□□ 0.742e-6■□□□□ 10.6
PKD1-230ENST00000565639 CHMP2BQ9UQN3 213 aa19.69■□□□□ 0.74
PKD1-230ENST00000565639 CHD5Q8TDI0 1954 aa19.69■□□□□ 0.74
PKD1-230ENST00000565639 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.68■□□□□ 0.74
PKD1-230ENST00000565639 F5H423 210 aaPredicted RBP19.68■□□□□ 0.74
PKD1-230ENST00000565639 RHOP08100 348 aa19.68■□□□□ 0.74
PKD1-230ENST00000565639 GJA1P17302 382 aa19.68■□□□□ 0.74
PKD1-230ENST00000565639 GNA12Q03113 381 aa19.68■□□□□ 0.74
PKD1-230ENST00000565639 ZNF177Q13360 481 aaPredicted RBP19.68■□□□□ 0.74
PKD1-230ENST00000565639 IGDCC3Q8IVU1 814 aa19.68■□□□□ 0.74
PKD1-230ENST00000565639 AGGF1Q8N302 714 aaeCLIP19.68■□□□□ 0.74
PKD1-230ENST00000565639 NSMCE1Q8WV22 266 aa19.68■□□□□ 0.74
PKD1-230ENST00000565639 ARHGEF2Q92974 986 aaKnown RBP19.68■□□□□ 0.74
PKD1-230ENST00000565639 SIGLEC10Q96LC7 697 aa19.68■□□□□ 0.74
PKD1-230ENST00000565639 PRKD2Q9BZL6 878 aa19.68■□□□□ 0.74
PKD1-230ENST00000565639 MSRAQ9UJ68 235 aa19.68■□□□□ 0.74
PKD1-230ENST00000565639 ZMYM5Q9UJ78 669 aa19.68■□□□□ 0.74
PKD1-230ENST00000565639 ARHGAP26Q9UNA1 814 aa19.68■□□□□ 0.74
PKD1-230ENST00000565639 TBC1D30Q9Y2I9 924 aa19.68■□□□□ 0.74
PKD1-230ENST00000565639 AAR2Q9Y312 384 aaKnown RBP19.68■□□□□ 0.74
PKD1-230ENST00000565639 HCFC2Q9Y5Z7 792 aa19.68■□□□□ 0.74
PKD1-230ENST00000565639 ILVBLA1L0T0 632 aa19.68■□□□□ 0.74
PKD1-230ENST00000565639 J3KR12 359 aa19.68■□□□□ 0.74
PKD1-230ENST00000565639 NRG2O14511 850 aaPredicted RBP19.68■□□□□ 0.74
PKD1-230ENST00000565639 ANXA9O76027 345 aa19.68■□□□□ 0.74
PKD1-230ENST00000565639 NEBLO76041 1014 aa19.68■□□□□ 0.74
PKD1-230ENST00000565639 GRIA1P42261 906 aa19.68■□□□□ 0.74
PKD1-230ENST00000565639 MTM1Q13496 603 aa19.68■□□□□ 0.74
PKD1-230ENST00000565639 ARHGAP15Q53QZ3 475 aa19.68■□□□□ 0.74
PKD1-230ENST00000565639 STXBP5Q5T5C0 1151 aa19.68■□□□□ 0.74
PKD1-230ENST00000565639 C3orf62Q6ZUJ4 267 aa19.68■□□□□ 0.74
PKD1-230ENST00000565639 TEX26Q8N6G2 289 aa19.68■□□□□ 0.74
PKD1-230ENST00000565639 HJURPQ8NCD3 748 aaPredicted RBP19.68■□□□□ 0.74
PKD1-230ENST00000565639 EPS8L3Q8TE67 593 aaKnown RBP19.68■□□□□ 0.74
PKD1-230ENST00000565639 ZNF419Q96HQ0 510 aaPredicted RBP19.68■□□□□ 0.74
PKD1-230ENST00000565639 MLPHQ9BV36 600 aaPredicted RBP19.68■□□□□ 0.74
PKD1-230ENST00000565639 LRRC40Q9H9A6 602 aa19.68■□□□□ 0.74
PKD1-230ENST00000565639 SH3BP1Q9Y3L3 701 aa19.68■□□□□ 0.74
PKD1-230ENST00000565639 CEP290O15078 2479 aa19.67■□□□□ 0.74
PKD1-230ENST00000565639 TLDC2A0PJX2 215 aa19.67■□□□□ 0.74
PKD1-230ENST00000565639 TRDMT1O14717 391 aaKnown RBP19.67■□□□□ 0.74
PKD1-230ENST00000565639 PER2O15055 1255 aa19.67■□□□□ 0.74
PKD1-230ENST00000565639 PRAMEF11O60813 436 aa19.67■□□□□ 0.74
PKD1-230ENST00000565639 MOSPD3O75425 235 aa19.67■□□□□ 0.74
PKD1-230ENST00000565639 GSTA2P09210 222 aa19.67■□□□□ 0.74
PKD1-230ENST00000565639 MMP13P45452 471 aa19.67■□□□□ 0.74
PKD1-230ENST00000565639 SGSHP51688 502 aa19.67■□□□□ 0.74
PKD1-230ENST00000565639 LONRF1Q17RB8 773 aa19.67■□□□□ 0.74
PKD1-230ENST00000565639 GPR158Q5T848 1215 aa19.67■□□□□ 0.74
PKD1-230ENST00000565639 MARC1Q5VT66 337 aa19.67■□□□□ 0.74
PKD1-230ENST00000565639 KCTD16Q68DU8 428 aa19.67■□□□□ 0.74
PKD1-230ENST00000565639 ZNF354CQ86Y25 554 aa19.67■□□□□ 0.74
PKD1-230ENST00000565639 CPXM2Q8N436 756 aa19.67■□□□□ 0.74
PKD1-230ENST00000565639 ZNF599Q96NL3 588 aa19.67■□□□□ 0.74
PKD1-230ENST00000565639 STMN4Q9H169 189 aaPredicted RBP19.67■□□□□ 0.74
PKD1-230ENST00000565639 TASP1Q9H6P5 420 aa19.67■□□□□ 0.74
PKD1-230ENST00000565639 CFAP97Q9P2B7 532 aa19.67■□□□□ 0.74
PKD1-230ENST00000565639 FETUBQ9UGM5 382 aa19.67■□□□□ 0.74
PKD1-230ENST00000565639 TYW5A2RUC4 315 aaKnown RBP19.66■□□□□ 0.74
PKD1-230ENST00000565639 RGS16O15492 202 aaPredicted RBP19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms