RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 COL27A1Q8IZC6 1860 aaPredicted RBP11.87□□□□□ -0.51
PRPF40B-212ENST00000551111 M0QYT0 321 aa11.87□□□□□ -0.51
PRPF40B-212ENST00000551111 PLRG1O43660 514 aaKnown RBP11.87□□□□□ -0.51
PRPF40B-212ENST00000551111 SDC3O75056 442 aa11.87□□□□□ -0.51
PRPF40B-212ENST00000551111 ABCB4P21439 1286 aa11.87□□□□□ -0.51
PRPF40B-212ENST00000551111 GLDCP23378 1020 aa11.87□□□□□ -0.51
PRPF40B-212ENST00000551111 RRM1P23921 792 aa11.87□□□□□ -0.51
PRPF40B-212ENST00000551111 EPHA8P29322 1005 aaPredicted RBP11.87□□□□□ -0.51
PRPF40B-212ENST00000551111 ACADVLP49748 655 aa11.87□□□□□ -0.51
PRPF40B-212ENST00000551111 SLC6A3Q01959 620 aa11.87□□□□□ -0.51
PRPF40B-212ENST00000551111 SLC12A1Q13621 1099 aa11.87□□□□□ -0.51
PRPF40B-212ENST00000551111 EXOC3L4Q17RC7 722 aa11.87□□□□□ -0.51
PRPF40B-212ENST00000551111 RAB6CQ53S08 254 aa11.87□□□□□ -0.51
PRPF40B-212ENST00000551111 HSP90AA4PQ58FG1 418 aa11.87□□□□□ -0.51
PRPF40B-212ENST00000551111 TRNP1Q6NT89 227 aa11.87□□□□□ -0.51
PRPF40B-212ENST00000551111 GBP6Q6ZN66 633 aa11.87□□□□□ -0.51
PRPF40B-212ENST00000551111 C11orf57Q6ZUT1 292 aaPredicted RBP11.87□□□□□ -0.51
PRPF40B-212ENST00000551111 ENOSF1Q7L5Y1 443 aa11.87□□□□□ -0.51
PRPF40B-212ENST00000551111 GALNT15Q8N3T1 639 aa11.87□□□□□ -0.51
PRPF40B-212ENST00000551111 SH2D3CQ8N5H7 860 aa11.87□□□□□ -0.51
PRPF40B-212ENST00000551111 CHST14Q8NCH0 376 aa11.87□□□□□ -0.51
PRPF40B-212ENST00000551111 TSC1Q92574 1164 aa11.87□□□□□ -0.51
PRPF40B-212ENST00000551111 ARRDC3Q96B67 414 aa11.87□□□□□ -0.51
PRPF40B-212ENST00000551111 SPAG5Q96R06 1193 aa11.87□□□□□ -0.51
PRPF40B-212ENST00000551111 RAB6CQ9H0N0 254 aa11.87□□□□□ -0.51
PRPF40B-212ENST00000551111 FZD3Q9NPG1 666 aa11.87□□□□□ -0.51
PRPF40B-212ENST00000551111 GDF3Q9NR23 364 aa11.87□□□□□ -0.51
PRPF40B-212ENST00000551111 KIAA1468Q9P260 1216 aa11.87□□□□□ -0.51
PRPF40B-212ENST00000551111 DKK4Q9UBT3 224 aa11.87□□□□□ -0.51
PRPF40B-212ENST00000551111 SLC12A6Q9UHW9 1150 aa11.87□□□□□ -0.51
PRPF40B-212ENST00000551111 RWDD2AQ9UIY3 292 aa11.87□□□□□ -0.51
PRPF40B-212ENST00000551111 DNAJC12Q9UKB3 198 aa11.87□□□□□ -0.51
PRPF40B-212ENST00000551111 A0A0D9SEW6 157 aa11.86□□□□□ -0.51
PRPF40B-212ENST00000551111 MCF2LO15068 1137 aa11.86□□□□□ -0.51
PRPF40B-212ENST00000551111 TLX3O43711 291 aaPredicted RBP11.86□□□□□ -0.51
PRPF40B-212ENST00000551111 DFNA5O60443 496 aa11.86□□□□□ -0.51
PRPF40B-212ENST00000551111 HSF2BPO75031 334 aa11.86□□□□□ -0.51
PRPF40B-212ENST00000551111 DAB1O75553 588 aa11.86□□□□□ -0.51
PRPF40B-212ENST00000551111 GLI1P08151 1106 aa11.86□□□□□ -0.51
PRPF40B-212ENST00000551111 SRCP12931 536 aa11.86□□□□□ -0.51
PRPF40B-212ENST00000551111 PRLRP16471 622 aa11.86□□□□□ -0.51
PRPF40B-212ENST00000551111 ITPKBP27987 946 aa11.86□□□□□ -0.51
PRPF40B-212ENST00000551111 RNASE9P60153 205 aaKnown RBP11.86□□□□□ -0.51
PRPF40B-212ENST00000551111 TARDBPQ13148 414 aaKnown RBP eCLIP11.86□□□□□ -0.51
PRPF40B-212ENST00000551111 BECN1Q14457 450 aa11.86□□□□□ -0.51
PRPF40B-212ENST00000551111 C5orf22Q49AR2 442 aa11.86□□□□□ -0.51
PRPF40B-212ENST00000551111 EFHC1Q5JVL4 640 aa11.86□□□□□ -0.51
PRPF40B-212ENST00000551111 RABGAP1LQ5R372 815 aa11.86□□□□□ -0.51
PRPF40B-212ENST00000551111 PIP5KL1Q5T9C9 394 aa11.86□□□□□ -0.51
PRPF40B-212ENST00000551111 SFMBT2Q5VUG0 894 aa11.86□□□□□ -0.51
PRPF40B-212ENST00000551111 NAPEPLDQ6IQ20 393 aa11.86□□□□□ -0.51
PRPF40B-212ENST00000551111 LINGO4Q6UY18 593 aa11.86□□□□□ -0.51
PRPF40B-212ENST00000551111 SLC26A9Q7LBE3 791 aa11.86□□□□□ -0.51
PRPF40B-212ENST00000551111 MFSD2AQ8NA29 543 aa11.86□□□□□ -0.51
PRPF40B-212ENST00000551111 OR8D1Q8WZ84 308 aa11.86□□□□□ -0.51
PRPF40B-212ENST00000551111 DCBLD2Q96PD2 775 aa11.86□□□□□ -0.51
PRPF40B-212ENST00000551111 NOX5Q96PH1 765 aa11.86□□□□□ -0.51
PRPF40B-212ENST00000551111 NPY6RQ99463 290 aa11.86□□□□□ -0.51
PRPF40B-212ENST00000551111 TRIM62Q9BVG3 475 aa11.86□□□□□ -0.51
PRPF40B-212ENST00000551111 ASNSD1Q9NWL6 643 aa11.86□□□□□ -0.51
PRPF40B-212ENST00000551111 MPP6Q9NZW5 540 aa11.86□□□□□ -0.51
PRPF40B-212ENST00000551111 VPS51Q9UID3 782 aa11.86□□□□□ -0.51
PRPF40B-212ENST00000551111 VPS28Q9UK41 221 aa11.86□□□□□ -0.51
PRPF40B-212ENST00000551111 TBC1D30Q9Y2I9 924 aa11.86□□□□□ -0.51
PRPF40B-212ENST00000551111 ACTL7AQ9Y615 435 aa11.86□□□□□ -0.51
PRPF40B-212ENST00000551111 GCN1Q92616 2671 aaKnown RBP11.86□□□□□ -0.51
PRPF40B-212ENST00000551111 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.85□□□□□ -0.51
PRPF40B-212ENST00000551111 TRIM38O00635 465 aa11.85□□□□□ -0.51
PRPF40B-212ENST00000551111 SLC31A1O15431 190 aa11.85□□□□□ -0.51
PRPF40B-212ENST00000551111 ZNF821O75541 412 aaPredicted RBP11.85□□□□□ -0.51
PRPF40B-212ENST00000551111 ENDOD1O94919 500 aa11.85□□□□□ -0.51
PRPF40B-212ENST00000551111 SLC2A3P11169 496 aa11.85□□□□□ -0.51
PRPF40B-212ENST00000551111 MYF5P13349 255 aa11.85□□□□□ -0.51
PRPF40B-212ENST00000551111 NOS2P35228 1153 aa11.85□□□□□ -0.51
PRPF40B-212ENST00000551111 NNMTP40261 264 aa11.85□□□□□ -0.51
PRPF40B-212ENST00000551111 RXRGP48443 463 aa11.85□□□□□ -0.51
PRPF40B-212ENST00000551111 CXCR3P49682 368 aa11.85□□□□□ -0.51
PRPF40B-212ENST00000551111 VASPP50552 380 aaPredicted RBP11.85□□□□□ -0.51
PRPF40B-212ENST00000551111 SULT2A1Q06520 285 aa11.85□□□□□ -0.51
PRPF40B-212ENST00000551111 KCNMA1Q12791 1236 aa11.85□□□□□ -0.51
PRPF40B-212ENST00000551111 SFSWAPQ12872 951 aaKnown RBP11.85□□□□□ -0.51
PRPF40B-212ENST00000551111 ZNF177Q13360 481 aaPredicted RBP11.85□□□□□ -0.51
PRPF40B-212ENST00000551111 MIIPQ5JXC2 388 aa11.85□□□□□ -0.51
PRPF40B-212ENST00000551111 HES3Q5TGS1 186 aa11.85□□□□□ -0.51
PRPF40B-212ENST00000551111 TTC39BQ5VTQ0 682 aaPredicted RBP11.85□□□□□ -0.51
PRPF40B-212ENST00000551111 FBXL19Q6PCT2 694 aa11.85□□□□□ -0.51
PRPF40B-212ENST00000551111 TFAP2DQ7Z6R9 452 aa11.85□□□□□ -0.51
PRPF40B-212ENST00000551111 PRPF39Q86UA1 669 aaKnown RBP11.85□□□□□ -0.51
PRPF40B-212ENST00000551111 SLC25A45Q8N413 288 aa11.85□□□□□ -0.51
PRPF40B-212ENST00000551111 PDCD7Q8N8D1 485 aaKnown RBP11.85□□□□□ -0.51
PRPF40B-212ENST00000551111 OR7D4Q8NG98 312 aa11.85□□□□□ -0.51
PRPF40B-212ENST00000551111 OR2A12Q8NGT7 310 aa11.85□□□□□ -0.51
PRPF40B-212ENST00000551111 NT5C3BQ969T7 300 aa11.85□□□□□ -0.51
PRPF40B-212ENST00000551111 TBCBQ99426 244 aa11.85□□□□□ -0.51
PRPF40B-212ENST00000551111 MAGEB5Q9BZ81 275 aa11.85□□□□□ -0.51
PRPF40B-212ENST00000551111 TKTL2Q9H0I9 626 aa11.85□□□□□ -0.51
PRPF40B-212ENST00000551111 UCKL1Q9NWZ5 548 aa11.85□□□□□ -0.51
PRPF40B-212ENST00000551111 ARHGEF38Q9NXL2 777 aa11.85□□□□□ -0.51
PRPF40B-212ENST00000551111 SLC25A13Q9UJS0 675 aa11.85□□□□□ -0.51
PRPF40B-212ENST00000551111 ZFR2Q9UPR6 939 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms