RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 KIF1CO43896 1103 aaKnown RBP2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 MARCH6O60337 910 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 NPHS1O60500 1241 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 DPM1O60762 260 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 TSPY3P0CV98 308 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 TSPY8P0CW00 308 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 GLI4P10075 376 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 NAT2P11245 290 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 ACADMP11310 421 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 HGFP14210 728 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 CREB1P16220 341 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 GUCY2CP25092 1073 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 OAS2P29728 719 aaKnown RBP2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 CDC25CP30307 473 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 MCM4P33991 863 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 THBS2P35442 1172 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 EIF4A3P38919 411 aaKnown RBP2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 EIF2DP41214 584 aaKnown RBP2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 WASP42768 502 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 ALDH1A3P47895 512 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 SCNN1GP51170 649 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 VAMP7P51809 220 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 PMS1P54277 932 aaKnown RBP2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 BCAT1P54687 386 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 FOXM1Q08050 763 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 ABHD18Q0P651 414 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 SPIDRQ14159 915 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 MTF1Q14872 753 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 NUMA1Q14980 2115 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 SMN1Q16637 294 aaKnown RBP2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 TWISTNBQ3B726 338 aaPredicted RBP2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 ZNF568Q3ZCX4 644 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 SLC45A4Q5BKX6 768 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 JAKMIP3Q5VZ66 844 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 CTR9Q6PD62 1173 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 ZPBP2Q6X784 338 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 ZNF517Q6ZMY9 492 aaPredicted RBP2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 HS2ST1Q7LGA3 356 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 TRMT1LQ7Z2T5 733 aaKnown RBP2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 DNAJB7Q7Z6W7 309 aaPredicted RBP2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 HPS6Q86YV9 775 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 CHPFQ8IZ52 775 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 CACNA2D3Q8IZS8 1091 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 SAMD3Q8N6K7 520 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 LRRC17Q8N6Y2 441 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 AMER3Q8N944 861 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 HASPINQ8TF76 798 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 RABGGTAQ92696 567 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 USP13Q92995 863 aaPredicted RBP2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 PNPLA2Q96AD5 504 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 TMEM159Q96B96 161 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 BIRC7Q96CA5 298 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 GPATCH3Q96I76 525 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 CDHR1Q96JP9 859 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 ZNF512BQ96KM6 892 aaPredicted RBP2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 APOLD1Q96LR9 279 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 CLIC6Q96NY7 704 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 TM9SF2Q99805 663 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 ZNF559Q9BR84 538 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 USP44Q9H0E7 712 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 WDR26Q9H7D7 661 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 L2HGDHQ9H9P8 463 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 GPN2Q9H9Y4 310 aaPredicted RBP2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 BARX1Q9HBU1 254 aaPredicted RBP2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 EPB41L5Q9HCM4 733 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 BRMS1Q9HCU9 246 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 COPRSQ9NQ92 184 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 ARHGEF4Q9NR80 690 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 MIOSQ9NXC5 875 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 STMN3Q9NZ72 180 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 NCKIPSDQ9NZQ3 722 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 FOXJ2Q9P0K8 574 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 LUZP4Q9P127 313 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 AFF4Q9UHB7 1163 aaKnown RBP2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 STX8Q9UNK0 236 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 CCL26Q9Y258 94 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 ZNF451Q9Y4E5 1061 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 TESMINQ9Y4I5 508 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 PCDHB6Q9Y5E3 794 aa2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 TIMM13Q9Y5L4 95 aaPredicted RBP2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 COPG1Q9Y678 874 aaKnown RBP2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 ZNF106Q9H2Y7 1883 aaKnown RBP2.34□□□□□ -2.03
TRAV1-1-201ENST00000542354 HERC2O95714 4834 aa2.34□□□□□ -2.04
TRAV1-1-201ENST00000542354 MYH4Q9Y623 1939 aa2.34□□□□□ -2.04
TRAV1-1-201ENST00000542354 EVPLQ92817 2033 aa2.34□□□□□ -2.04
TRAV1-1-201ENST00000542354 UNC13CQ8NB66 2214 aa2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 RBMY1BA6NDE4 496 aaKnown RBP2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 RBMY1EA6NEQ0 496 aaKnown RBP2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 NEMP2A6NFY4 417 aa2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 MINDY4BA8MYZ0 360 aa2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 FOXO6A8MYZ6 492 aa2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 KCNJ18B7U540 433 aa2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 H7C4K7 107 aa2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 C19orf84I3L1E1 186 aa2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 TLR4O00206 839 aa2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 PRKAB2O43741 272 aa2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 DUX1O43812 170 aa2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 CSDE1O75534 798 aaKnown RBP2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 FSBPO95073 299 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms