RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 WASHC5Q12768 1159 aa11.81□□□□□ -0.52
USP35-207ENST00000530546 MPP3Q13368 585 aa11.81□□□□□ -0.52
USP35-207ENST00000530546 ITGA7Q13683 1181 aa11.81□□□□□ -0.52
USP35-207ENST00000530546 CYLC2Q14093 348 aaPredicted RBP11.81□□□□□ -0.52
USP35-207ENST00000530546 DPYSQ14117 519 aa11.81□□□□□ -0.52
USP35-207ENST00000530546 MROH9Q5TGP6 573 aa11.81□□□□□ -0.52
USP35-207ENST00000530546 TTC39BQ5VTQ0 682 aaPredicted RBP11.81□□□□□ -0.52
USP35-207ENST00000530546 C4orf22Q6V702 233 aa11.81□□□□□ -0.52
USP35-207ENST00000530546 B3GNT6Q6ZMB0 384 aa11.81□□□□□ -0.52
USP35-207ENST00000530546 ADGRG6Q86SQ4 1221 aa11.81□□□□□ -0.52
USP35-207ENST00000530546 SIK2Q9H0K1 926 aa11.81□□□□□ -0.52
USP35-207ENST00000530546 WDCPQ9H6R7 721 aa11.81□□□□□ -0.52
USP35-207ENST00000530546 SSU72Q9NP77 194 aaKnown RBP11.81□□□□□ -0.52
USP35-207ENST00000530546 NUDT5Q9UKK9 219 aa11.81□□□□□ -0.52
USP35-207ENST00000530546 TMEM88BA6NKF7 163 aa11.8□□□□□ -0.52
USP35-207ENST00000530546 C1QAP02745 245 aa11.8□□□□□ -0.52
USP35-207ENST00000530546 HNRNPCP07910 306 aaKnown RBP eCLIP11.8□□□□□ -0.52
USP35-207ENST00000530546 SRGAP2BP0DMP2 458 aa11.8□□□□□ -0.52
USP35-207ENST00000530546 ESRRAP11474 423 aaPredicted RBP11.8□□□□□ -0.52
USP35-207ENST00000530546 PGM1P36871 562 aa11.8□□□□□ -0.52
USP35-207ENST00000530546 TM4SF4P48230 202 aa11.8□□□□□ -0.52
USP35-207ENST00000530546 INTS6LQ5JSJ4 861 aaKnown RBP11.8□□□□□ -0.52
USP35-207ENST00000530546 OVOS1Q6IE37 1185 aa11.8□□□□□ -0.52
USP35-207ENST00000530546 BNIPLQ7Z465 357 aa11.8□□□□□ -0.52
USP35-207ENST00000530546 PSTKQ8IV42 348 aaKnown RBP11.8□□□□□ -0.52
USP35-207ENST00000530546 GSDMBQ8TAX9 411 aa11.8□□□□□ -0.52
USP35-207ENST00000530546 RSPH1Q8WYR4 309 aa11.8□□□□□ -0.52
USP35-207ENST00000530546 CELF6Q96J87 481 aaKnown RBP11.8□□□□□ -0.52
USP35-207ENST00000530546 FERMT1Q9BQL6 677 aa11.8□□□□□ -0.52
USP35-207ENST00000530546 COLEC11Q9BWP8 271 aa11.8□□□□□ -0.52
USP35-207ENST00000530546 XAB2Q9HCS7 855 aaKnown RBP11.8□□□□□ -0.52
USP35-207ENST00000530546 PNPLA8Q9NP80 782 aa11.8□□□□□ -0.52
USP35-207ENST00000530546 FBXW11Q9UKB1 542 aa11.8□□□□□ -0.52
USP35-207ENST00000530546 MTO1Q9Y2Z2 717 aaKnown RBP11.8□□□□□ -0.52
USP35-207ENST00000530546 COPEO14579 308 aa11.8□□□□□ -0.52
USP35-207ENST00000530546 DCLK1O15075 740 aa11.8□□□□□ -0.52
USP35-207ENST00000530546 AP1G1O43747 822 aa11.8□□□□□ -0.52
USP35-207ENST00000530546 AOC2O75106 756 aa11.8□□□□□ -0.52
USP35-207ENST00000530546 CIB2O75838 187 aa11.8□□□□□ -0.52
USP35-207ENST00000530546 KRT37O76014 449 aa11.8□□□□□ -0.52
USP35-207ENST00000530546 SNRPAP09012 282 aaKnown RBP11.8□□□□□ -0.52
USP35-207ENST00000530546 FDFT1P37268 417 aa11.8□□□□□ -0.52
USP35-207ENST00000530546 ASPHQ12797 758 aa11.8□□□□□ -0.52
USP35-207ENST00000530546 MED21Q13503 144 aa11.8□□□□□ -0.52
USP35-207ENST00000530546 PRKD1Q15139 912 aaPredicted RBP11.8□□□□□ -0.52
USP35-207ENST00000530546 ARL13BQ3SXY8 428 aa11.8□□□□□ -0.52
USP35-207ENST00000530546 RAB41Q5JT25 222 aa11.8□□□□□ -0.52
USP35-207ENST00000530546 CDHR3Q6ZTQ4 885 aa11.8□□□□□ -0.52
USP35-207ENST00000530546 TAC4Q86UU9 113 aa11.8□□□□□ -0.52
USP35-207ENST00000530546 NPWQ8N729 165 aa11.8□□□□□ -0.52
USP35-207ENST00000530546 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.8□□□□□ -0.52
USP35-207ENST00000530546 DIS3LQ8TF46 1054 aaKnown RBP11.8□□□□□ -0.52
USP35-207ENST00000530546 SKA1Q96BD8 255 aa11.8□□□□□ -0.52
USP35-207ENST00000530546 ALKBH8Q96BT7 664 aaKnown RBP11.8□□□□□ -0.52
USP35-207ENST00000530546 APOPT1Q96IL0 206 aa11.8□□□□□ -0.52
USP35-207ENST00000530546 TRIM55Q9BYV6 548 aa11.8□□□□□ -0.52
USP35-207ENST00000530546 TBCCD1Q9NVR7 557 aa11.8□□□□□ -0.52
USP35-207ENST00000530546 DCTN4Q9UJW0 460 aa11.8□□□□□ -0.52
USP35-207ENST00000530546 ITGB1BP2Q9UKP3 347 aa11.8□□□□□ -0.52
USP35-207ENST00000530546 TRPM7Q96QT4 1865 aa11.8□□□□□ -0.52
USP35-207ENST00000530546 ZNF623O75123 536 aa11.79□□□□□ -0.52
USP35-207ENST00000530546 CPA3P15088 417 aa11.79□□□□□ -0.52
USP35-207ENST00000530546 ADARP55265 1226 aaKnown RBP11.79□□□□□ -0.52
USP35-207ENST00000530546 TUSC3Q13454 348 aa11.79□□□□□ -0.52
USP35-207ENST00000530546 DSC3Q14574 896 aa11.79□□□□□ -0.52
USP35-207ENST00000530546 PLEKHG4Q58EX7 1191 aa11.79□□□□□ -0.52
USP35-207ENST00000530546 RWDD4Q6NW29 188 aaKnown RBP11.79□□□□□ -0.52
USP35-207ENST00000530546 CD300LGQ6UXG3 332 aa11.79□□□□□ -0.52
USP35-207ENST00000530546 BHLHA9Q7RTU4 235 aa11.79□□□□□ -0.52
USP35-207ENST00000530546 SCN4BQ8IWT1 228 aa11.79□□□□□ -0.52
USP35-207ENST00000530546 TRPV6Q9H1D0 765 aa11.79□□□□□ -0.52
USP35-207ENST00000530546 HEY2Q9UBP5 337 aa11.79□□□□□ -0.52
USP35-207ENST00000530546 PCDHA11Q9Y5I1 949 aa11.79□□□□□ -0.52
USP35-207ENST00000530546 NUMBLQ9Y6R0 609 aa11.79□□□□□ -0.52
USP35-207ENST00000530546 TRDMT1O14717 391 aaKnown RBP11.79□□□□□ -0.52
USP35-207ENST00000530546 TM9SF1O15321 606 aa11.79□□□□□ -0.52
USP35-207ENST00000530546 FKBP6O75344 327 aa11.79□□□□□ -0.52
USP35-207ENST00000530546 TOMM70O94826 608 aa11.79□□□□□ -0.52
USP35-207ENST00000530546 BGNP21810 368 aa11.79□□□□□ -0.52
USP35-207ENST00000530546 PRKCHP24723 683 aa11.79□□□□□ -0.52
USP35-207ENST00000530546 MAGEA3P43357 314 aa11.79□□□□□ -0.52
USP35-207ENST00000530546 PAFAH1B3Q15102 231 aaKnown RBP11.79□□□□□ -0.52
USP35-207ENST00000530546 TMCO4Q5TGY1 634 aa11.79□□□□□ -0.52
USP35-207ENST00000530546 PDSS2Q86YH6 399 aa11.79□□□□□ -0.52
USP35-207ENST00000530546 TMPRSS6Q8IU80 811 aa11.79□□□□□ -0.52
USP35-207ENST00000530546 KLHDC9Q8NEP7 349 aa11.79□□□□□ -0.52
USP35-207ENST00000530546 OR6Y1Q8NGX8 325 aa11.79□□□□□ -0.52
USP35-207ENST00000530546 NMD3Q96D46 503 aaKnown RBP11.79□□□□□ -0.52
USP35-207ENST00000530546 LRRC39Q96DD0 335 aa11.79□□□□□ -0.52
USP35-207ENST00000530546 APOL2Q9BQE5 337 aa11.79□□□□□ -0.52
USP35-207ENST00000530546 ACBD6Q9BR61 282 aa11.79□□□□□ -0.52
USP35-207ENST00000530546 MANSC1Q9H8J5 431 aa11.79□□□□□ -0.52
USP35-207ENST00000530546 OR12D3Q9UGF7 316 aa11.79□□□□□ -0.52
USP35-207ENST00000530546 HTTP42858 3142 aa11.79□□□□□ -0.52
USP35-207ENST00000530546 SDR42E2A6NKP2 422 aa11.79□□□□□ -0.52
USP35-207ENST00000530546 BIRC5O15392 142 aa11.79□□□□□ -0.52
USP35-207ENST00000530546 B4GALT3O60512 393 aa11.79□□□□□ -0.52
USP35-207ENST00000530546 E2F6O75461 281 aa11.79□□□□□ -0.52
USP35-207ENST00000530546 TOP3BO95985 862 aaKnown RBP11.79□□□□□ -0.52
USP35-207ENST00000530546 F7P08709 466 aaPredicted RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms