RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 D6RAR5 112 aa14.29□□□□□ -0.12
NKX3-1-202ENST00000523261 TMX2-CTNND1H3BSU7 103 aa14.29□□□□□ -0.12
NKX3-1-202ENST00000523261 AGFG2O95081 481 aa14.29□□□□□ -0.12
NKX3-1-202ENST00000523261 MOCS3O95396 460 aa14.29□□□□□ -0.12
NKX3-1-202ENST00000523261 RPN1P04843 607 aaKnown RBP14.29□□□□□ -0.12
NKX3-1-202ENST00000523261 JMJD7P0C870 316 aa14.29□□□□□ -0.12
NKX3-1-202ENST00000523261 RPIAP49247 311 aa14.29□□□□□ -0.12
NKX3-1-202ENST00000523261 ZACNQ401N2 412 aa14.29□□□□□ -0.12
NKX3-1-202ENST00000523261 PIP5KL1Q5T9C9 394 aa14.29□□□□□ -0.12
NKX3-1-202ENST00000523261 ZNF787Q6DD87 383 aa14.29□□□□□ -0.12
NKX3-1-202ENST00000523261 NEK5Q6P3R8 708 aa14.29□□□□□ -0.12
NKX3-1-202ENST00000523261 PTAR1Q7Z6K3 402 aaPredicted RBP14.29□□□□□ -0.12
NKX3-1-202ENST00000523261 PARGQ86W56 976 aa14.29□□□□□ -0.12
NKX3-1-202ENST00000523261 FAM174AQ8TBP5 190 aa14.29□□□□□ -0.12
NKX3-1-202ENST00000523261 OR8D1Q8WZ84 308 aa14.29□□□□□ -0.12
NKX3-1-202ENST00000523261 BMFQ96LC9 184 aa14.29□□□□□ -0.12
NKX3-1-202ENST00000523261 ZNF71Q9NQZ8 489 aaPredicted RBP14.29□□□□□ -0.12
NKX3-1-202ENST00000523261 FOXJ2Q9P0K8 574 aa14.29□□□□□ -0.12
NKX3-1-202ENST00000523261 PCDHB11Q9Y5F2 797 aa14.29□□□□□ -0.12
NKX3-1-202ENST00000523261 SETD2Q9BYW2 2564 aaPredicted RBP14.29□□□□□ -0.12
NKX3-1-202ENST00000523261 MED13Q9UHV7 2174 aa14.29□□□□□ -0.12
NKX3-1-202ENST00000523261 A0A1W2PQ27 194 aa14.28□□□□□ -0.12
NKX3-1-202ENST00000523261 A0A1W2PQ64 194 aa14.28□□□□□ -0.12
NKX3-1-202ENST00000523261 A0A1W2PQC6 194 aa14.28□□□□□ -0.12
NKX3-1-202ENST00000523261 MTSS1O43312 755 aa14.28□□□□□ -0.12
NKX3-1-202ENST00000523261 ITIH1P19827 911 aa14.28□□□□□ -0.12
NKX3-1-202ENST00000523261 ELAVL4P26378 380 aaKnown RBP14.28□□□□□ -0.12
NKX3-1-202ENST00000523261 TNFRSF8P28908 595 aa14.28□□□□□ -0.12
NKX3-1-202ENST00000523261 CCKBRP32239 447 aa14.28□□□□□ -0.12
NKX3-1-202ENST00000523261 SLC11A2P49281 568 aa14.28□□□□□ -0.12
NKX3-1-202ENST00000523261 SNRPFP62306 86 aaKnown RBP14.28□□□□□ -0.12
NKX3-1-202ENST00000523261 BSPRYQ5W0U4 402 aa14.28□□□□□ -0.12
NKX3-1-202ENST00000523261 OTOGQ6ZRI0 2925 aa14.28□□□□□ -0.12
NKX3-1-202ENST00000523261 TICAM1Q8IUC6 712 aa14.28□□□□□ -0.12
NKX3-1-202ENST00000523261 C12orf56Q8IXR9 622 aa14.28□□□□□ -0.12
NKX3-1-202ENST00000523261 C9orf43Q8TAL5 461 aaPredicted RBP14.28□□□□□ -0.12
NKX3-1-202ENST00000523261 LMX1AQ8TE12 382 aa14.28□□□□□ -0.12
NKX3-1-202ENST00000523261 GLMNQ92990 594 aa14.28□□□□□ -0.12
NKX3-1-202ENST00000523261 PPP1R13BQ96KQ4 1090 aa14.28□□□□□ -0.12
NKX3-1-202ENST00000523261 PHF12Q96QT6 1004 aa14.28□□□□□ -0.12
NKX3-1-202ENST00000523261 CYP3A43Q9HB55 503 aa14.28□□□□□ -0.12
NKX3-1-202ENST00000523261 ZFR2Q9UPR6 939 aaKnown RBP14.28□□□□□ -0.12
NKX3-1-202ENST00000523261 LOXL2Q9Y4K0 774 aa14.28□□□□□ -0.12
NKX3-1-202ENST00000523261 HS3ST3A1Q9Y663 406 aa14.28□□□□□ -0.12
NKX3-1-202ENST00000523261 TYW5A2RUC4 315 aaKnown RBP14.27□□□□□ -0.13
NKX3-1-202ENST00000523261 POM121BA6NF01 834 aa14.27□□□□□ -0.13
NKX3-1-202ENST00000523261 YJEFN3A6XGL0 299 aa14.27□□□□□ -0.13
NKX3-1-202ENST00000523261 E7ENQ6 273 aa14.27□□□□□ -0.13
NKX3-1-202ENST00000523261 C1QTNF3-AMACRE9PGA6 284 aa14.27□□□□□ -0.13
NKX3-1-202ENST00000523261 EXOC3O60645 756 aa14.27□□□□□ -0.13
NKX3-1-202ENST00000523261 LUC7L3O95232 432 aaKnown RBP14.27□□□□□ -0.13
NKX3-1-202ENST00000523261 JUNDP17535 347 aa14.27□□□□□ -0.13
NKX3-1-202ENST00000523261 CD58P19256 250 aa14.27□□□□□ -0.13
NKX3-1-202ENST00000523261 NNMTP40261 264 aa14.27□□□□□ -0.13
NKX3-1-202ENST00000523261 ETV5P41161 510 aa14.27□□□□□ -0.13
NKX3-1-202ENST00000523261 NUGGCQ68CJ6 796 aa14.27□□□□□ -0.13
NKX3-1-202ENST00000523261 MSANTD2Q6P1R3 559 aa14.27□□□□□ -0.13
NKX3-1-202ENST00000523261 KYAT3Q6YP21 454 aaKnown RBP14.27□□□□□ -0.13
NKX3-1-202ENST00000523261 UNC45BQ8IWX7 931 aa14.27□□□□□ -0.13
NKX3-1-202ENST00000523261 NELFCDQ8IXH7 590 aa14.27□□□□□ -0.13
NKX3-1-202ENST00000523261 CFAP52Q8N1V2 620 aa14.27□□□□□ -0.13
NKX3-1-202ENST00000523261 SSC4DQ8WTU2 575 aa14.27□□□□□ -0.13
NKX3-1-202ENST00000523261 AZIN2Q96A70 460 aa14.27□□□□□ -0.13
NKX3-1-202ENST00000523261 GFM1Q96RP9 751 aaKnown RBP14.27□□□□□ -0.13
NKX3-1-202ENST00000523261 RABGEF1Q9UJ41 708 aa14.27□□□□□ -0.13
NKX3-1-202ENST00000523261 PADI4Q9UM07 663 aa14.27□□□□□ -0.13
NKX3-1-202ENST00000523261 TRPM6Q9BX84 2022 aa14.26□□□□□ -0.13
NKX3-1-202ENST00000523261 A0A087X0B3 334 aa14.26□□□□□ -0.13
NKX3-1-202ENST00000523261 C9orf172C9J069 976 aa14.26□□□□□ -0.13
NKX3-1-202ENST00000523261 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.26□□□□□ -0.13
NKX3-1-202ENST00000523261 TULP2O00295 520 aa14.26□□□□□ -0.13
NKX3-1-202ENST00000523261 MCF2LO15068 1137 aa14.26□□□□□ -0.13
NKX3-1-202ENST00000523261 ALOX15BO15296 676 aa14.26□□□□□ -0.13
NKX3-1-202ENST00000523261 GCATO75600 419 aa14.26□□□□□ -0.13
NKX3-1-202ENST00000523261 HLA-DRAP01903 254 aa14.26□□□□□ -0.13
NKX3-1-202ENST00000523261 RNF224P0DH78 156 aa14.26□□□□□ -0.13
NKX3-1-202ENST00000523261 STAT6P42226 847 aa14.26□□□□□ -0.13
NKX3-1-202ENST00000523261 UQCRFS1P47985 274 aa14.26□□□□□ -0.13
NKX3-1-202ENST00000523261 NUMBP49757 651 aa14.26□□□□□ -0.13
NKX3-1-202ENST00000523261 OXCT1P55809 520 aa14.26□□□□□ -0.13
NKX3-1-202ENST00000523261 DLG4P78352 724 aa14.26□□□□□ -0.13
NKX3-1-202ENST00000523261 TMEM259Q4ZIN3 620 aa14.26□□□□□ -0.13
NKX3-1-202ENST00000523261 MS4A13Q5J8X5 152 aa14.26□□□□□ -0.13
NKX3-1-202ENST00000523261 TPRG1LQ5T0D9 272 aa14.26□□□□□ -0.13
NKX3-1-202ENST00000523261 SEL1L3Q68CR1 1132 aa14.26□□□□□ -0.13
NKX3-1-202ENST00000523261 CCDC73Q6ZRK6 1079 aa14.26□□□□□ -0.13
NKX3-1-202ENST00000523261 SV2AQ7L0J3 742 aa14.26□□□□□ -0.13
NKX3-1-202ENST00000523261 CCDC117Q8IWD4 279 aaPredicted RBP14.26□□□□□ -0.13
NKX3-1-202ENST00000523261 USP7Q93009 1102 aa14.26□□□□□ -0.13
NKX3-1-202ENST00000523261 NUCKS1Q9H1E3 243 aaKnown RBP14.26□□□□□ -0.13
NKX3-1-202ENST00000523261 APOBEC3GQ9HC16 384 aaKnown RBP14.26□□□□□ -0.13
NKX3-1-202ENST00000523261 ABCC13Q9NSE7 274 aa14.26□□□□□ -0.13
NKX3-1-202ENST00000523261 FBXO2Q9UK22 296 aaPredicted RBP14.26□□□□□ -0.13
NKX3-1-202ENST00000523261 SDK2Q58EX2 2172 aa14.25□□□□□ -0.13
NKX3-1-202ENST00000523261 A0A1W2PQM1 296 aa14.25□□□□□ -0.13
NKX3-1-202ENST00000523261 A1L4Q6 167 aa14.25□□□□□ -0.13
NKX3-1-202ENST00000523261 VPS37CA5D8V6 355 aaPredicted RBP14.25□□□□□ -0.13
NKX3-1-202ENST00000523261 LMO7DNF2Z398 122 aa14.25□□□□□ -0.13
NKX3-1-202ENST00000523261 H3BQV1 296 aa14.25□□□□□ -0.13
NKX3-1-202ENST00000523261 TXLNAP40222 546 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms