RNA–Protein interactions for RNA: ENST00000522227.5

CTNNA1-234, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-234ENST00000522227 KLRB1Q12918 225 aa11.38□□□□□ -0.59
CTNNA1-234ENST00000522227 ARID5BQ14865 1188 aa11.38□□□□□ -0.59
CTNNA1-234ENST00000522227 ZNF394Q53GI3 561 aa11.38□□□□□ -0.59
CTNNA1-234ENST00000522227 LACTB2Q53H82 288 aaPredicted RBP11.38□□□□□ -0.59
CTNNA1-234ENST00000522227 PPP1R26Q5T8A7 1209 aaPredicted RBP11.38□□□□□ -0.59
CTNNA1-234ENST00000522227 FAM46CQ5VWP2 391 aa11.38□□□□□ -0.59
CTNNA1-234ENST00000522227 SEL1L3Q68CR1 1132 aa11.38□□□□□ -0.59
CTNNA1-234ENST00000522227 SV2BQ7L1I2 683 aa11.38□□□□□ -0.59
CTNNA1-234ENST00000522227 MAMDC2Q7Z304 686 aaPredicted RBP11.38□□□□□ -0.59
CTNNA1-234ENST00000522227 HEATR4Q86WZ0 1026 aa11.38□□□□□ -0.59
CTNNA1-234ENST00000522227 DTX1Q86Y01 620 aa11.38□□□□□ -0.59
CTNNA1-234ENST00000522227 TICAM1Q8IUC6 712 aa11.38□□□□□ -0.59
CTNNA1-234ENST00000522227 Q8N9G6 341 aaPredicted RBP11.38□□□□□ -0.59
CTNNA1-234ENST00000522227 TEX19Q8NA77 164 aa11.38□□□□□ -0.59
CTNNA1-234ENST00000522227 IFT43Q96FT9 208 aa11.38□□□□□ -0.59
CTNNA1-234ENST00000522227 PRICKLE1Q96MT3 831 aaPredicted RBP11.38□□□□□ -0.59
CTNNA1-234ENST00000522227 SPAG5Q96R06 1193 aa11.38□□□□□ -0.59
CTNNA1-234ENST00000522227 LLPHQ9BRT6 129 aaKnown RBP11.38□□□□□ -0.59
CTNNA1-234ENST00000522227 DUSP16Q9BY84 665 aa11.38□□□□□ -0.59
CTNNA1-234ENST00000522227 ULBP1Q9BZM6 244 aa11.38□□□□□ -0.59
CTNNA1-234ENST00000522227 TP53TG5Q9Y2B4 290 aa11.38□□□□□ -0.59
CTNNA1-234ENST00000522227 HBS1LQ9Y450 684 aaKnown RBP11.38□□□□□ -0.59
CTNNA1-234ENST00000522227 CSNK1G3Q9Y6M4 447 aa11.38□□□□□ -0.59
CTNNA1-234ENST00000522227 C1QTNF3-AMACRE9PGA6 284 aa11.37□□□□□ -0.59
CTNNA1-234ENST00000522227 NKX2-8O15522 239 aa11.37□□□□□ -0.59
CTNNA1-234ENST00000522227 GCATO75600 419 aa11.37□□□□□ -0.59
CTNNA1-234ENST00000522227 ANXA6P08133 673 aa11.37□□□□□ -0.59
CTNNA1-234ENST00000522227 P4HA1P13674 534 aa11.37□□□□□ -0.59
CTNNA1-234ENST00000522227 LIFP15018 202 aa11.37□□□□□ -0.59
CTNNA1-234ENST00000522227 NME1P15531 152 aaKnown RBP11.37□□□□□ -0.59
CTNNA1-234ENST00000522227 GJB2P29033 226 aa11.37□□□□□ -0.59
CTNNA1-234ENST00000522227 TKTL1P51854 596 aa11.37□□□□□ -0.59
CTNNA1-234ENST00000522227 C1QBPQ07021 282 aaKnown RBP11.37□□□□□ -0.59
CTNNA1-234ENST00000522227 PDE1CQ14123 709 aaPredicted RBP11.37□□□□□ -0.59
CTNNA1-234ENST00000522227 FAM133BQ5BKY9 247 aaKnown RBP11.37□□□□□ -0.59
CTNNA1-234ENST00000522227 PRRT3Q5FWE3 981 aa11.37□□□□□ -0.59
CTNNA1-234ENST00000522227 TPRG1LQ5T0D9 272 aa11.37□□□□□ -0.59
CTNNA1-234ENST00000522227 NUGGCQ68CJ6 796 aa11.37□□□□□ -0.59
CTNNA1-234ENST00000522227 ESRP1Q6NXG1 681 aaKnown RBP11.37□□□□□ -0.59
CTNNA1-234ENST00000522227 TMPRSS9Q7Z410 1059 aa11.37□□□□□ -0.59
CTNNA1-234ENST00000522227 ABI3BPQ7Z7G0 1075 aa11.37□□□□□ -0.59
CTNNA1-234ENST00000522227 PARGQ86W56 976 aa11.37□□□□□ -0.59
CTNNA1-234ENST00000522227 UNC93AQ86WB7 457 aa11.37□□□□□ -0.59
CTNNA1-234ENST00000522227 HORMAD1Q86X24 394 aa11.37□□□□□ -0.59
CTNNA1-234ENST00000522227 FAM114A1Q8IWE2 563 aa11.37□□□□□ -0.59
CTNNA1-234ENST00000522227 NELFCDQ8IXH7 590 aa11.37□□□□□ -0.59
CTNNA1-234ENST00000522227 IL22RA1Q8N6P7 574 aa11.37□□□□□ -0.59
CTNNA1-234ENST00000522227 EFCAB3Q8N7B9 438 aa11.37□□□□□ -0.59
CTNNA1-234ENST00000522227 KDM1BQ8NB78 822 aa11.37□□□□□ -0.59
CTNNA1-234ENST00000522227 HJURPQ8NCD3 748 aaPredicted RBP11.37□□□□□ -0.59
CTNNA1-234ENST00000522227 PLEKHO2Q8TD55 490 aa11.37□□□□□ -0.59
CTNNA1-234ENST00000522227 BMFQ96LC9 184 aa11.37□□□□□ -0.59
CTNNA1-234ENST00000522227 TMEM74Q96NL1 305 aa11.37□□□□□ -0.59
CTNNA1-234ENST00000522227 BOCQ9BWV1 1114 aa11.37□□□□□ -0.59
CTNNA1-234ENST00000522227 VRTNQ9H8Y1 702 aa11.37□□□□□ -0.59
CTNNA1-234ENST00000522227 OLA1Q9NTK5 396 aaKnown RBP11.37□□□□□ -0.59
CTNNA1-234ENST00000522227 STOML2Q9UJZ1 356 aa11.37□□□□□ -0.59
CTNNA1-234ENST00000522227 ZFR2Q9UPR6 939 aaKnown RBP11.37□□□□□ -0.59
CTNNA1-234ENST00000522227 SCN8AQ9UQD0 1980 aa11.36□□□□□ -0.59
CTNNA1-234ENST00000522227 SPTY2D1-AS1A0A0U1RR47 76 aa11.36□□□□□ -0.59
CTNNA1-234ENST00000522227 A0A1W2PQ27 194 aa11.36□□□□□ -0.59
CTNNA1-234ENST00000522227 A0A1W2PQ64 194 aa11.36□□□□□ -0.59
CTNNA1-234ENST00000522227 A0A1W2PQC6 194 aa11.36□□□□□ -0.59
CTNNA1-234ENST00000522227 A0A1W2PQM1 296 aa11.36□□□□□ -0.59
CTNNA1-234ENST00000522227 TYW5A2RUC4 315 aaKnown RBP11.36□□□□□ -0.59
CTNNA1-234ENST00000522227 TMX2-CTNND1H3BSU7 103 aa11.36□□□□□ -0.59
CTNNA1-234ENST00000522227 K7EM74 188 aa11.36□□□□□ -0.59
CTNNA1-234ENST00000522227 DUX1O43812 170 aa11.36□□□□□ -0.59
CTNNA1-234ENST00000522227 ACSL4O60488 711 aa11.36□□□□□ -0.59
CTNNA1-234ENST00000522227 CD2BP2O95400 341 aaKnown RBP11.36□□□□□ -0.59
CTNNA1-234ENST00000522227 HOXD13P35453 343 aa11.36□□□□□ -0.59
CTNNA1-234ENST00000522227 LONP1P36776 959 aaKnown RBP11.36□□□□□ -0.59
CTNNA1-234ENST00000522227 SLC11A2P49281 568 aa11.36□□□□□ -0.59
CTNNA1-234ENST00000522227 ATP1A2P50993 1020 aa11.36□□□□□ -0.59
CTNNA1-234ENST00000522227 DEFB109BQ30KR1 87 aa11.36□□□□□ -0.59
CTNNA1-234ENST00000522227 MPP7Q5T2T1 576 aa11.36□□□□□ -0.59
CTNNA1-234ENST00000522227 PHF19Q5T6S3 580 aa11.36□□□□□ -0.59
CTNNA1-234ENST00000522227 C1QL3Q5VWW1 255 aa11.36□□□□□ -0.59
CTNNA1-234ENST00000522227 RRAGBQ5VZM2 374 aa11.36□□□□□ -0.59
CTNNA1-234ENST00000522227 NADSYN1Q6IA69 706 aa11.36□□□□□ -0.59
CTNNA1-234ENST00000522227 Q6ZVU0 165 aa11.36□□□□□ -0.59
CTNNA1-234ENST00000522227 SV2AQ7L0J3 742 aa11.36□□□□□ -0.59
CTNNA1-234ENST00000522227 PIGZQ86VD9 579 aa11.36□□□□□ -0.59
CTNNA1-234ENST00000522227 ZC3H18Q86VM9 953 aaKnown RBP11.36□□□□□ -0.59
CTNNA1-234ENST00000522227 XXYLT1Q8NBI6 393 aa11.36□□□□□ -0.59
CTNNA1-234ENST00000522227 PDCD6IPQ8WUM4 868 aaKnown RBP11.36□□□□□ -0.59
CTNNA1-234ENST00000522227 FAM131CQ96AQ9 280 aa11.36□□□□□ -0.59
CTNNA1-234ENST00000522227 NT5C1AQ9BXI3 368 aa11.36□□□□□ -0.59
CTNNA1-234ENST00000522227 PANK2Q9BZ23 570 aa11.36□□□□□ -0.59
CTNNA1-234ENST00000522227 AGPAT3Q9NRZ7 376 aa11.36□□□□□ -0.59
CTNNA1-234ENST00000522227 SPASTQ9UBP0 616 aa11.36□□□□□ -0.59
CTNNA1-234ENST00000522227 APOBEC3BQ9UH17 382 aaKnown RBP11.36□□□□□ -0.59
CTNNA1-234ENST00000522227 CELSR2Q9HCU4 2923 aa11.36□□□□□ -0.59
CTNNA1-234ENST00000522227 LRRIQ3A6PVS8 624 aaPredicted RBP11.35□□□□□ -0.59
CTNNA1-234ENST00000522227 KPNA3O00505 521 aaPredicted RBP11.35□□□□□ -0.59
CTNNA1-234ENST00000522227 TPP1O14773 563 aa11.35□□□□□ -0.59
CTNNA1-234ENST00000522227 RAD51BO15315 384 aa11.35□□□□□ -0.59
CTNNA1-234ENST00000522227 SPINT1O43278 529 aa11.35□□□□□ -0.59
CTNNA1-234ENST00000522227 CNTN5O94779 1100 aa11.35□□□□□ -0.59
CTNNA1-234ENST00000522227 LATS1O95835 1130 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms