RNA–Protein interactions for RNA: ENST00000519253.5

PCM1-212, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 6,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-212ENST00000519253 EPB41L1Q9H4G0 881 aa8.65□□□□□ -1.03
PCM1-212ENST00000519253 CXorf21Q9HAI6 301 aa8.65□□□□□ -1.03
PCM1-212ENST00000519253 GPRC5DQ9NZD1 345 aa8.65□□□□□ -1.03
PCM1-212ENST00000519253 TMEM216Q9P0N5 145 aa8.65□□□□□ -1.03
PCM1-212ENST00000519253 V9GYQ6 96 aa8.65□□□□□ -1.03
PCM1-212ENST00000519253 A0A088AWK7 358 aa8.64□□□□□ -1.03
PCM1-212ENST00000519253 VPS4BO75351 444 aa8.64□□□□□ -1.03
PCM1-212ENST00000519253 ALOX5P09917 674 aa8.64□□□□□ -1.03
PCM1-212ENST00000519253 INPP1P49441 399 aa8.64□□□□□ -1.03
PCM1-212ENST00000519253 ACADVLP49748 655 aa8.64□□□□□ -1.03
PCM1-212ENST00000519253 CDK9P50750 372 aaKnown RBP8.64□□□□□ -1.03
PCM1-212ENST00000519253 CAPSQ13938 189 aa8.64□□□□□ -1.03
PCM1-212ENST00000519253 DGUOKQ16854 277 aa8.64□□□□□ -1.03
PCM1-212ENST00000519253 TXNRD3NBQ6F5E7 133 aa8.64□□□□□ -1.03
PCM1-212ENST00000519253 MRPL57Q9BQC6 102 aaKnown RBP8.64□□□□□ -1.03
PCM1-212ENST00000519253 POMKQ9H5K3 350 aa8.64□□□□□ -1.03
PCM1-212ENST00000519253 SP110Q9HB58 689 aa8.64□□□□□ -1.03
PCM1-212ENST00000519253 DDIT4Q9NX09 232 aa8.64□□□□□ -1.03
PCM1-212ENST00000519253 FAM95CA0A1B0GW59 222 aa8.64□□□□□ -1.03
PCM1-212ENST00000519253 UBA6A0AVT1 1052 aaPredicted RBP8.64□□□□□ -1.03
PCM1-212ENST00000519253 FBXO21O94952 628 aa8.64□□□□□ -1.03
PCM1-212ENST00000519253 VNN1O95497 513 aa8.64□□□□□ -1.03
PCM1-212ENST00000519253 HOXB8P17481 243 aaPredicted RBP8.64□□□□□ -1.03
PCM1-212ENST00000519253 MPSTP25325 297 aa8.64□□□□□ -1.03
PCM1-212ENST00000519253 MSX2P35548 267 aaPredicted RBP8.64□□□□□ -1.03
PCM1-212ENST00000519253 RBBP7Q16576 425 aa8.64□□□□□ -1.03
PCM1-212ENST00000519253 SV2CQ496J9 727 aa8.64□□□□□ -1.03
PCM1-212ENST00000519253 PDCD4Q53EL6 469 aaKnown RBP8.64□□□□□ -1.03
PCM1-212ENST00000519253 HOMEZQ8IX15 550 aa8.64□□□□□ -1.03
PCM1-212ENST00000519253 ANKRD52Q8NB46 1076 aa8.64□□□□□ -1.03
PCM1-212ENST00000519253 AGBL3Q8NEM8 1001 aa8.64□□□□□ -1.03
PCM1-212ENST00000519253 ZNF516Q92618 1163 aa8.64□□□□□ -1.03
PCM1-212ENST00000519253 GLMNQ92990 594 aa8.64□□□□□ -1.03
PCM1-212ENST00000519253 CIB1Q99828 191 aa8.64□□□□□ -1.03
PCM1-212ENST00000519253 TMEM165Q9HC07 324 aa8.64□□□□□ -1.03
PCM1-212ENST00000519253 SYBUQ9NX95 663 aa8.64□□□□□ -1.03
PCM1-212ENST00000519253 RCOR3Q9P2K3 495 aaPredicted RBP8.64□□□□□ -1.03
PCM1-212ENST00000519253 WDR37Q9Y2I8 494 aa8.64□□□□□ -1.03
PCM1-212ENST00000519253 DENRO43583 198 aaKnown RBP8.64□□□□□ -1.03
PCM1-212ENST00000519253 SOAT2O75908 522 aa8.64□□□□□ -1.03
PCM1-212ENST00000519253 TKTP29401 623 aaKnown RBP8.64□□□□□ -1.03
PCM1-212ENST00000519253 ETV4P43268 484 aa8.64□□□□□ -1.03
PCM1-212ENST00000519253 GAD2Q05329 585 aa8.64□□□□□ -1.03
PCM1-212ENST00000519253 IMPG1Q17R60 797 aa8.64□□□□□ -1.03
PCM1-212ENST00000519253 LSM12Q3MHD2 195 aaKnown RBP8.64□□□□□ -1.03
PCM1-212ENST00000519253 ZNF781Q8N8C0 355 aa8.64□□□□□ -1.03
PCM1-212ENST00000519253 TFAP2BQ92481 460 aa8.64□□□□□ -1.03
PCM1-212ENST00000519253 QKIQ96PU8 341 aaKnown RBP eCLIP8.64□□□□□ -1.033e-7■■■■□ 24.9
PCM1-212ENST00000519253 NOL11Q9H8H0 719 aaKnown RBP8.64□□□□□ -1.03
PCM1-212ENST00000519253 B4GALT4O60513 344 aa8.64□□□□□ -1.03
PCM1-212ENST00000519253 CST3P01034 146 aaPredicted RBP8.64□□□□□ -1.03
PCM1-212ENST00000519253 TNFSF9P41273 254 aa8.64□□□□□ -1.03
PCM1-212ENST00000519253 SPDYE2Q495Y8 402 aa8.64□□□□□ -1.03
PCM1-212ENST00000519253 OTUD3Q5T2D3 398 aaPredicted RBP8.64□□□□□ -1.03
PCM1-212ENST00000519253 FRMD7Q6ZUT3 714 aa8.64□□□□□ -1.03
PCM1-212ENST00000519253 KDELC2Q7Z4H8 507 aa8.64□□□□□ -1.03
PCM1-212ENST00000519253 S100ZQ8WXG8 99 aa8.64□□□□□ -1.03
PCM1-212ENST00000519253 LPGAT1Q92604 370 aa8.64□□□□□ -1.03
PCM1-212ENST00000519253 FAM162AQ96A26 154 aa8.64□□□□□ -1.03
PCM1-212ENST00000519253 ULK4Q96C45 1275 aa8.64□□□□□ -1.03
PCM1-212ENST00000519253 MMP19Q99542 508 aa8.64□□□□□ -1.03
PCM1-212ENST00000519253 ACO2Q99798 780 aaKnown RBP8.64□□□□□ -1.03
PCM1-212ENST00000519253 TRMOQ9BU70 441 aa8.64□□□□□ -1.03
PCM1-212ENST00000519253 RHOJQ9H4E5 214 aa8.64□□□□□ -1.03
PCM1-212ENST00000519253 PRDM12Q9H4Q4 367 aa8.64□□□□□ -1.03
PCM1-212ENST00000519253 PHRF1Q9P1Y6 1649 aaKnown RBP8.64□□□□□ -1.03
PCM1-212ENST00000519253 BBIP1A8MTZ0 92 aa8.64□□□□□ -1.03
PCM1-212ENST00000519253 LACTBL1A8MY62 500 aa8.64□□□□□ -1.03
PCM1-212ENST00000519253 NRP2O60462 931 aa8.64□□□□□ -1.03
PCM1-212ENST00000519253 PMPCBO75439 489 aa8.64□□□□□ -1.03
PCM1-212ENST00000519253 GSNP06396 782 aa8.64□□□□□ -1.03
PCM1-212ENST00000519253 TAF6P49848 677 aa8.64□□□□□ -1.03
PCM1-212ENST00000519253 TNK2Q07912 1038 aa8.64□□□□□ -1.03
PCM1-212ENST00000519253 TOP3AQ13472 1001 aaPredicted RBP8.64□□□□□ -1.03
PCM1-212ENST00000519253 SHROOM1Q2M3G4 852 aaPredicted RBP8.64□□□□□ -1.03
PCM1-212ENST00000519253 ZBTB41Q5SVQ8 909 aa8.64□□□□□ -1.03
PCM1-212ENST00000519253 MRNIPQ6NTE8 343 aa8.64□□□□□ -1.03
PCM1-212ENST00000519253 UNC93AQ86WB7 457 aa8.64□□□□□ -1.03
PCM1-212ENST00000519253 PNPT1Q8TCS8 783 aaKnown RBP8.64□□□□□ -1.03
PCM1-212ENST00000519253 VPS33AQ96AX1 596 aa8.64□□□□□ -1.03
PCM1-212ENST00000519253 NPAS2Q99743 824 aa8.64□□□□□ -1.03
PCM1-212ENST00000519253 HOPXQ9BPY8 73 aaPredicted RBP8.64□□□□□ -1.03
PCM1-212ENST00000519253 ZNF395Q9H8N7 513 aaPredicted RBP8.64□□□□□ -1.03
PCM1-212ENST00000519253 XPR1Q9UBH6 696 aa8.64□□□□□ -1.03
PCM1-212ENST00000519253 CNTNAP2Q9UHC6 1331 aa8.63□□□□□ -1.03
PCM1-212ENST00000519253 CXorf49A8MYA2 514 aaPredicted RBP8.63□□□□□ -1.03
PCM1-212ENST00000519253 SUPT3HB4E1H0 165 aa8.63□□□□□ -1.03
PCM1-212ENST00000519253 PAPSS1O43252 624 aaPredicted RBP8.63□□□□□ -1.03
PCM1-212ENST00000519253 USP12O75317 370 aa8.63□□□□□ -1.03
PCM1-212ENST00000519253 DLGAP3O95886 979 aa8.63□□□□□ -1.03
PCM1-212ENST00000519253 TPH1P17752 444 aa8.63□□□□□ -1.03
PCM1-212ENST00000519253 NELFEP18615 380 aaKnown RBP8.63□□□□□ -1.03
PCM1-212ENST00000519253 SOX11P35716 441 aa8.63□□□□□ -1.03
PCM1-212ENST00000519253 CLCN3P51790 818 aa8.63□□□□□ -1.03
PCM1-212ENST00000519253 SLC7A2P52569 658 aa8.63□□□□□ -1.03
PCM1-212ENST00000519253 BACE1P56817 501 aa8.63□□□□□ -1.03
PCM1-212ENST00000519253 SEMA5AQ13591 1074 aa8.63□□□□□ -1.03
PCM1-212ENST00000519253 ARL13AQ5H913 290 aaPredicted RBP8.63□□□□□ -1.03
PCM1-212ENST00000519253 SEPT8Q92599 483 aa8.63□□□□□ -1.03
PCM1-212ENST00000519253 TOP1MTQ969P6 601 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms