RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 ENGP17813 658 aa8.49□□□□□ -1.05
HDAC6-221ENST00000477561 GLDCP23378 1020 aa8.49□□□□□ -1.05
HDAC6-221ENST00000477561 OR1E1P30953 314 aa8.49□□□□□ -1.05
HDAC6-221ENST00000477561 SLC8A1P32418 973 aa8.49□□□□□ -1.05
HDAC6-221ENST00000477561 CYLC1P35663 651 aaPredicted RBP8.49□□□□□ -1.05
HDAC6-221ENST00000477561 PTPN9P43378 593 aa8.49□□□□□ -1.05
HDAC6-221ENST00000477561 PSMD8P48556 350 aa8.49□□□□□ -1.05
HDAC6-221ENST00000477561 OXCT1P55809 520 aa8.49□□□□□ -1.05
HDAC6-221ENST00000477561 SULT2A1Q06520 285 aa8.49□□□□□ -1.05
HDAC6-221ENST00000477561 KLHL30Q0D2K2 578 aa8.49□□□□□ -1.05
HDAC6-221ENST00000477561 DLG2Q15700 870 aa8.49□□□□□ -1.05
HDAC6-221ENST00000477561 CST6Q15828 149 aa8.49□□□□□ -1.05
HDAC6-221ENST00000477561 DUOXA1Q1HG43 343 aa8.49□□□□□ -1.05
HDAC6-221ENST00000477561 ARL13BQ3SXY8 428 aa8.49□□□□□ -1.05
HDAC6-221ENST00000477561 SYCP2LQ5T4T6 812 aa8.49□□□□□ -1.05
HDAC6-221ENST00000477561 RWDD4Q6NW29 188 aaKnown RBP8.49□□□□□ -1.05
HDAC6-221ENST00000477561 DCUN1D2Q6PH85 259 aa8.49□□□□□ -1.05
HDAC6-221ENST00000477561 LINGO4Q6UY18 593 aa8.49□□□□□ -1.05
HDAC6-221ENST00000477561 STRADAQ7RTN6 431 aa8.49□□□□□ -1.05
HDAC6-221ENST00000477561 ERMP1Q7Z2K6 904 aa8.49□□□□□ -1.05
HDAC6-221ENST00000477561 TMEM139Q8IV31 216 aa8.49□□□□□ -1.05
HDAC6-221ENST00000477561 CCDC170Q8IYT3 715 aa8.49□□□□□ -1.05
HDAC6-221ENST00000477561 PYROXD2Q8N2H3 581 aa8.49□□□□□ -1.05
HDAC6-221ENST00000477561 KDM1BQ8NB78 822 aa8.49□□□□□ -1.05
HDAC6-221ENST00000477561 OR2I1PQ8NGU4 316 aa8.49□□□□□ -1.05
HDAC6-221ENST00000477561 SNX19Q92543 992 aa8.49□□□□□ -1.05
HDAC6-221ENST00000477561 CENPIQ92674 756 aaPredicted RBP8.49□□□□□ -1.05
HDAC6-221ENST00000477561 FOXJ1Q92949 421 aa8.49□□□□□ -1.05
HDAC6-221ENST00000477561 PSMB7Q99436 277 aa8.49□□□□□ -1.05
HDAC6-221ENST00000477561 SPON2Q9BUD6 331 aa8.49□□□□□ -1.05
HDAC6-221ENST00000477561 GTPBP2Q9BX10 602 aaKnown RBP8.49□□□□□ -1.05
HDAC6-221ENST00000477561 ZYG11BQ9C0D3 744 aa8.49□□□□□ -1.05
HDAC6-221ENST00000477561 PABPC3Q9H361 631 aaKnown RBP8.49□□□□□ -1.05
HDAC6-221ENST00000477561 TMEM9BQ9NQ34 198 aa8.49□□□□□ -1.05
HDAC6-221ENST00000477561 KCND1Q9NSA2 647 aa8.49□□□□□ -1.05
HDAC6-221ENST00000477561 FBXL12Q9NXK8 326 aa8.49□□□□□ -1.05
HDAC6-221ENST00000477561 AIPL1Q9NZN9 384 aa8.49□□□□□ -1.05
HDAC6-221ENST00000477561 OR12D3Q9UGF7 316 aa8.49□□□□□ -1.05
HDAC6-221ENST00000477561 SERGEFQ9UGK8 458 aa8.49□□□□□ -1.05
HDAC6-221ENST00000477561 EVLQ9UI08 416 aaPredicted RBP8.49□□□□□ -1.05
HDAC6-221ENST00000477561 EIF2B4Q9UI10 523 aaKnown RBP8.49□□□□□ -1.05
HDAC6-221ENST00000477561 SLC25A13Q9UJS0 675 aa8.49□□□□□ -1.05
HDAC6-221ENST00000477561 SLC6A14Q9UN76 642 aa8.49□□□□□ -1.05
HDAC6-221ENST00000477561 BZW2Q9Y6E2 419 aaKnown RBP8.49□□□□□ -1.05
HDAC6-221ENST00000477561 CKAP5Q14008 2032 aa8.48□□□□□ -1.05
HDAC6-221ENST00000477561 NUP205Q92621 2012 aa8.48□□□□□ -1.05
HDAC6-221ENST00000477561 IGLV3-10A0A075B6K4 115 aa8.48□□□□□ -1.05
HDAC6-221ENST00000477561 A0A1W2PP55 124 aa8.48□□□□□ -1.05
HDAC6-221ENST00000477561 ANKRD62A6NC57 917 aa8.48□□□□□ -1.05
HDAC6-221ENST00000477561 GOLGA6L9A6NEM1 432 aa8.48□□□□□ -1.05
HDAC6-221ENST00000477561 METTL12A8MUP2 240 aa8.48□□□□□ -1.05
HDAC6-221ENST00000477561 PLK4O00444 970 aa8.48□□□□□ -1.05
HDAC6-221ENST00000477561 DDX3XO00571 662 aaKnown RBP eCLIP8.48□□□□□ -1.05
HDAC6-221ENST00000477561 CDX4O14627 284 aaPredicted RBP8.48□□□□□ -1.05
HDAC6-221ENST00000477561 SMAD6O43541 496 aaKnown RBP8.48□□□□□ -1.05
HDAC6-221ENST00000477561 RNASEH2AO75792 299 aaKnown RBP8.48□□□□□ -1.05
HDAC6-221ENST00000477561 FSBPO95073 299 aa8.48□□□□□ -1.05
HDAC6-221ENST00000477561 SEMA4FO95754 770 aa8.48□□□□□ -1.05
HDAC6-221ENST00000477561 IGLV3-19P01714 112 aa8.48□□□□□ -1.05
HDAC6-221ENST00000477561 FTLP02792 175 aaPredicted RBP8.48□□□□□ -1.05
HDAC6-221ENST00000477561 PLEKP08567 350 aaPredicted RBP8.48□□□□□ -1.05
HDAC6-221ENST00000477561 SERPINF2P08697 491 aa8.48□□□□□ -1.05
HDAC6-221ENST00000477561 SRCP12931 536 aa8.48□□□□□ -1.05
HDAC6-221ENST00000477561 ZNF143P52747 638 aaPredicted RBP8.48□□□□□ -1.05
HDAC6-221ENST00000477561 METAP1P53582 386 aa8.48□□□□□ -1.05
HDAC6-221ENST00000477561 LIMK1P53667 647 aa8.48□□□□□ -1.05
HDAC6-221ENST00000477561 ATXN3P54252 364 aaPredicted RBP8.48□□□□□ -1.05
HDAC6-221ENST00000477561 GSCP56915 257 aaPredicted RBP8.48□□□□□ -1.05
HDAC6-221ENST00000477561 KRT83P78385 493 aa8.48□□□□□ -1.05
HDAC6-221ENST00000477561 OGDHQ02218 1023 aa8.48□□□□□ -1.05
HDAC6-221ENST00000477561 ZBTB16Q05516 673 aa8.48□□□□□ -1.05
HDAC6-221ENST00000477561 GFPT1Q06210 699 aaPredicted RBP8.48□□□□□ -1.05
HDAC6-221ENST00000477561 POM121L1PQ3SYA9 428 aa8.48□□□□□ -1.05
HDAC6-221ENST00000477561 TTC31Q49AM3 519 aaPredicted RBP8.48□□□□□ -1.05
HDAC6-221ENST00000477561 PPM1JQ5JR12 505 aa8.48□□□□□ -1.05
HDAC6-221ENST00000477561 WDR45BQ5MNZ6 344 aa8.48□□□□□ -1.05
HDAC6-221ENST00000477561 PPP1R15BQ5SWA1 713 aa8.48□□□□□ -1.05
HDAC6-221ENST00000477561 C6orf118Q5T5N4 469 aa8.48□□□□□ -1.05
HDAC6-221ENST00000477561 PEAR1Q5VY43 1037 aaPredicted RBP8.48□□□□□ -1.05
HDAC6-221ENST00000477561 SLC23A3Q6PIS1 610 aa8.48□□□□□ -1.05
HDAC6-221ENST00000477561 Q6ZVU0 165 aa8.48□□□□□ -1.05
HDAC6-221ENST00000477561 TXLNBQ8N3L3 684 aa8.48□□□□□ -1.05
HDAC6-221ENST00000477561 HDDC3Q8N4P3 179 aa8.48□□□□□ -1.05
HDAC6-221ENST00000477561 ZCCHC9Q8N567 271 aaKnown RBP8.48□□□□□ -1.05
HDAC6-221ENST00000477561 SH2D3CQ8N5H7 860 aa8.48□□□□□ -1.05
HDAC6-221ENST00000477561 ATP11CQ8NB49 1132 aa8.48□□□□□ -1.05
HDAC6-221ENST00000477561 CADM4Q8NFZ8 388 aa8.48□□□□□ -1.05
HDAC6-221ENST00000477561 CEP76Q8TAP6 659 aa8.48□□□□□ -1.05
HDAC6-221ENST00000477561 FRS2Q8WU20 508 aa8.48□□□□□ -1.05
HDAC6-221ENST00000477561 OMDQ99983 421 aa8.48□□□□□ -1.05
HDAC6-221ENST00000477561 BTBD1Q9H0C5 482 aa8.48□□□□□ -1.05
HDAC6-221ENST00000477561 OSBPL2Q9H1P3 480 aa8.48□□□□□ -1.05
HDAC6-221ENST00000477561 NEUROG2Q9H2A3 272 aa8.48□□□□□ -1.05
HDAC6-221ENST00000477561 DEF6Q9H4E7 631 aa8.48□□□□□ -1.05
HDAC6-221ENST00000477561 FBRSQ9HAH7 460 aa8.48□□□□□ -1.05
HDAC6-221ENST00000477561 NDFIP2Q9NV92 336 aa8.48□□□□□ -1.05
HDAC6-221ENST00000477561 TMEM51Q9NW97 253 aa8.48□□□□□ -1.05
HDAC6-221ENST00000477561 MYO1AQ9UBC5 1043 aa8.48□□□□□ -1.05
HDAC6-221ENST00000477561 DNAI1Q9UI46 699 aa8.48□□□□□ -1.05
HDAC6-221ENST00000477561 VPS51Q9UID3 782 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms