RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, human

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRAT1-205	ENST00000473879	MAATS1	Q7Z4T9	603 aa		13.61	□□□□□ -0.23
BRAT1-205	ENST00000473879	WDR5B	Q86VZ2	330 aa		13.61	□□□□□ -0.23
BRAT1-205	ENST00000473879	CHSY1	Q86X52	802 aa		13.61	□□□□□ -0.23
BRAT1-205	ENST00000473879	FAM72B	Q86X60	149 aa		13.61	□□□□□ -0.23
BRAT1-205	ENST00000473879	KLHL7	Q8IXQ5	586 aa		13.61	□□□□□ -0.23
BRAT1-205	ENST00000473879	CPXM2	Q8N436	756 aa		13.61	□□□□□ -0.23
BRAT1-205	ENST00000473879	PQLC3	Q8N755	202 aa		13.61	□□□□□ -0.23
BRAT1-205	ENST00000473879	NAT16	Q8N8M0	369 aa		13.61	□□□□□ -0.23
BRAT1-205	ENST00000473879	GRK7	Q8WTQ7	553 aa		13.61	□□□□□ -0.23
BRAT1-205	ENST00000473879	UBXN4	Q92575	508 aa		13.61	□□□□□ -0.23
BRAT1-205	ENST00000473879	P3H4	Q92791	437 aa		13.61	□□□□□ -0.23
BRAT1-205	ENST00000473879	XPO6	Q96QU8	1125 aa	Known RBP	13.61	□□□□□ -0.23
BRAT1-205	ENST00000473879	KRT12	Q99456	494 aa		13.61	□□□□□ -0.23
BRAT1-205	ENST00000473879	BBS2	Q9BXC9	721 aa		13.61	□□□□□ -0.23
BRAT1-205	ENST00000473879	DEC1	Q9P2X7	70 aa		13.61	□□□□□ -0.23
BRAT1-205	ENST00000473879	PPARGC1A	Q9UBK2	798 aa	Known RBP	13.61	□□□□□ -0.23
BRAT1-205	ENST00000473879	FEZ2	Q9UHY8	353 aa	Predicted RBP	13.61	□□□□□ -0.23
BRAT1-205	ENST00000473879	XPO7	Q9UIA9	1087 aa	Known RBP	13.61	□□□□□ -0.23
BRAT1-205	ENST00000473879	AGO1	Q9UL18	857 aa	Known RBP	13.61	□□□□□ -0.23
BRAT1-205	ENST00000473879	RAD54B	Q9Y620	910 aa		13.61	□□□□□ -0.23
BRAT1-205	ENST00000473879	NEDD8-MDP1	E9PL57	170 aa		13.6	□□□□□ -0.23
BRAT1-205	ENST00000473879	LIAS	O43766	372 aa		13.6	□□□□□ -0.23
BRAT1-205	ENST00000473879	ZNF189	O75820	626 aa	Predicted RBP	13.6	□□□□□ -0.23
BRAT1-205	ENST00000473879	TYR	P14679	529 aa		13.6	□□□□□ -0.23
BRAT1-205	ENST00000473879	ERCC2	P18074	760 aa		13.6	□□□□□ -0.23
BRAT1-205	ENST00000473879	TACR2	P21452	398 aa		13.6	□□□□□ -0.23
BRAT1-205	ENST00000473879	AMPD1	P23109	780 aa		13.6	□□□□□ -0.23
BRAT1-205	ENST00000473879	KIR2DL1	P43626	348 aa	Predicted RBP	13.6	□□□□□ -0.23
BRAT1-205	ENST00000473879	OTUD4	Q01804	1114 aa	Known RBP	13.6	□□□□□ -0.23
BRAT1-205	ENST00000473879	LMNB2	Q03252	620 aa		13.6	□□□□□ -0.23
BRAT1-205	ENST00000473879	ADCY2	Q08462	1091 aa		13.6	□□□□□ -0.23
BRAT1-205	ENST00000473879	AUH	Q13825	339 aa	Known RBP	13.6	□□□□□ -0.23
BRAT1-205	ENST00000473879	DHX34	Q14147	1143 aa	Known RBP	13.6	□□□□□ -0.23
BRAT1-205	ENST00000473879	DMC1	Q14565	340 aa		13.6	□□□□□ -0.23
BRAT1-205	ENST00000473879	PAFAH1B3	Q15102	231 aa	Known RBP	13.6	□□□□□ -0.23
BRAT1-205	ENST00000473879	NOMO1	Q15155	1222 aa		13.6	□□□□□ -0.23
BRAT1-205	ENST00000473879	HSF5	Q4G112	596 aa	Predicted RBP	13.6	□□□□□ -0.23
BRAT1-205	ENST00000473879	FAM133B	Q5BKY9	247 aa	Known RBP	13.6	□□□□□ -0.23
BRAT1-205	ENST00000473879	RABGAP1L	Q5R372	815 aa		13.6	□□□□□ -0.23
BRAT1-205	ENST00000473879	RAP1GAP2	Q684P5	730 aa		13.6	□□□□□ -0.23
BRAT1-205	ENST00000473879	NCBP2-AS2	Q69YL0	99 aa		13.6	□□□□□ -0.23
BRAT1-205	ENST00000473879	RWDD4	Q6NW29	188 aa	Known RBP	13.6	□□□□□ -0.23
BRAT1-205	ENST00000473879	DRICH1	Q6PGQ1	229 aa	Predicted RBP	13.6	□□□□□ -0.23
BRAT1-205	ENST00000473879	CCDC137	Q6PK04	289 aa	Known RBP	13.6	□□□□□ -0.23
BRAT1-205	ENST00000473879	NUDT18	Q6ZVK8	323 aa		13.6	□□□□□ -0.23
BRAT1-205	ENST00000473879	DENND1C	Q8IV53	801 aa		13.6	□□□□□ -0.23
BRAT1-205	ENST00000473879	PLD5	Q8N7P1	536 aa		13.6	□□□□□ -0.23
BRAT1-205	ENST00000473879	NOA1	Q8NC60	698 aa	Known RBP	13.6	□□□□□ -0.23
BRAT1-205	ENST00000473879	LRRN4CL	Q8ND94	238 aa		13.6	□□□□□ -0.23
BRAT1-205	ENST00000473879	KCNV2	Q8TDN2	545 aa		13.6	□□□□□ -0.23
BRAT1-205	ENST00000473879	C1orf54	Q8WWF1	131 aa		13.6	□□□□□ -0.23
BRAT1-205	ENST00000473879	HAUS1	Q96CS2	278 aa		13.6	□□□□□ -0.23
BRAT1-205	ENST00000473879	MAGEB5	Q9BZ81	275 aa		13.6	□□□□□ -0.23
BRAT1-205	ENST00000473879	DDX47	Q9H0S4	455 aa	Known RBP	13.6	□□□□□ -0.23
BRAT1-205	ENST00000473879	RETREG1	Q9H6L5	497 aa		13.6	□□□□□ -0.23
BRAT1-205	ENST00000473879	FBXO10	Q9UK96	956 aa		13.6	□□□□□ -0.23
BRAT1-205	ENST00000473879	VANGL2	Q9ULK5	521 aa		13.6	□□□□□ -0.23
BRAT1-205	ENST00000473879	SNX10	Q9Y5X0	201 aa		13.6	□□□□□ -0.23
BRAT1-205	ENST00000473879	DCHS1	Q96JQ0	3298 aa		13.6	□□□□□ -0.23
BRAT1-205	ENST00000473879	ATG2B	Q96BY7	2078 aa		13.59	□□□□□ -0.23
BRAT1-205	ENST00000473879	MUC22	E2RYF6	1773 aa	Predicted RBP	13.59	□□□□□ -0.23
BRAT1-205	ENST00000473879	IGLV3-10	A0A075B6K4	115 aa		13.59	□□□□□ -0.23
BRAT1-205	ENST00000473879	TBC1D3B	A6NDS4	549 aa		13.59	□□□□□ -0.23
BRAT1-205	ENST00000473879	DCLK1	O15075	740 aa		13.59	□□□□□ -0.23
BRAT1-205	ENST00000473879	COIL	P38432	576 aa	Predicted RBP	13.59	□□□□□ -0.23
BRAT1-205	ENST00000473879	GGCX	P38435	758 aa		13.59	□□□□□ -0.23
BRAT1-205	ENST00000473879	TERF1	P54274	439 aa		13.59	□□□□□ -0.23
BRAT1-205	ENST00000473879	SEC13	P55735	322 aa		13.59	□□□□□ -0.23
BRAT1-205	ENST00000473879	KDSR	Q06136	332 aa		13.59	□□□□□ -0.23
BRAT1-205	ENST00000473879	BYSL	Q13895	437 aa	Known RBP	13.59	□□□□□ -0.23
BRAT1-205	ENST00000473879	C2orf27A	Q580R0	203 aa		13.59	□□□□□ -0.23
BRAT1-205	ENST00000473879	ADGRF1	Q5T601	910 aa		13.59	□□□□□ -0.23
BRAT1-205	ENST00000473879	TTC39B	Q5VTQ0	682 aa	Predicted RBP	13.59	□□□□□ -0.23
BRAT1-205	ENST00000473879	FYB2	Q5VWT5	728 aa		13.59	□□□□□ -0.23
BRAT1-205	ENST00000473879	HEATR6	Q6AI08	1181 aa	Known RBP	13.59	□□□□□ -0.23
BRAT1-205	ENST00000473879	GRAMD4	Q6IC98	578 aa		13.59	□□□□□ -0.23
BRAT1-205	ENST00000473879	SFTPA1	Q8IWL2	248 aa		13.59	□□□□□ -0.23
BRAT1-205	ENST00000473879	LZTR1	Q8N653	840 aa		13.59	□□□□□ -0.23
BRAT1-205	ENST00000473879	TERB1	Q8NA31	727 aa		13.59	□□□□□ -0.23
BRAT1-205	ENST00000473879	ACTL9	Q8TC94	416 aa		13.59	□□□□□ -0.23
BRAT1-205	ENST00000473879	ATG4A	Q8WYN0	398 aa		13.59	□□□□□ -0.23
BRAT1-205	ENST00000473879	CCDC114	Q96M63	670 aa		13.59	□□□□□ -0.23
BRAT1-205	ENST00000473879	RPRD1A	Q96P16	312 aa	Predicted RBP	13.59	□□□□□ -0.23
BRAT1-205	ENST00000473879	PRMT1	Q99873	361 aa	Known RBP	13.59	□□□□□ -0.23
BRAT1-205	ENST00000473879	ZYG11B	Q9C0D3	744 aa		13.59	□□□□□ -0.23
BRAT1-205	ENST00000473879	DNAJC17	Q9NVM6	304 aa	Known RBP	13.59	□□□□□ -0.23
BRAT1-205	ENST00000473879	PCYOX1	Q9UHG3	505 aa		13.59	□□□□□ -0.23
BRAT1-205	ENST00000473879	MMP17	Q9ULZ9	603 aa		13.59	□□□□□ -0.23
BRAT1-205	ENST00000473879	NEU3	Q9UQ49	428 aa		13.59	□□□□□ -0.23
BRAT1-205	ENST00000473879	R3HDM2	Q9Y2K5	976 aa	Known RBP	13.59	□□□□□ -0.23
BRAT1-205	ENST00000473879	STARD13	Q9Y3M8	1113 aa		13.59	□□□□□ -0.23
BRAT1-205	ENST00000473879	HEY1	Q9Y5J3	304 aa		13.59	□□□□□ -0.23
BRAT1-205	ENST00000473879	WDR87	Q6ZQQ6	2873 aa		13.59	□□□□□ -0.23
BRAT1-205	ENST00000473879	TYW5	A2RUC4	315 aa	Known RBP	13.58	□□□□□ -0.24
BRAT1-205	ENST00000473879	ANTXRL	A6NF34	631 aa		13.58	□□□□□ -0.24
BRAT1-205	ENST00000473879	FAM187A	A6NFU0	413 aa		13.58	□□□□□ -0.24
BRAT1-205	ENST00000473879	WASH4P	A8MWX3	477 aa		13.58	□□□□□ -0.24
BRAT1-205	ENST00000473879	HR	O43593	1189 aa		13.58	□□□□□ -0.24
BRAT1-205	ENST00000473879	ECEL1	O95672	775 aa		13.58	□□□□□ -0.24
BRAT1-205	ENST00000473879	GAS8	O95995	478 aa		13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms