RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 A0A0D9SEW6 157 aa15.3■□□□□ 0.04
CDC42SE1-203ENST00000470278 LRRD1A4D1F6 860 aa15.3■□□□□ 0.04
CDC42SE1-203ENST00000470278 MIF4GDA9UHW6 222 aaKnown RBP15.3■□□□□ 0.04
CDC42SE1-203ENST00000470278 DAPK3O43293 454 aa15.3■□□□□ 0.04
CDC42SE1-203ENST00000470278 LILRB5O75023 590 aa15.3■□□□□ 0.04
CDC42SE1-203ENST00000470278 KRT1P04264 644 aa15.3■□□□□ 0.04
CDC42SE1-203ENST00000470278 SRPRAP08240 638 aaKnown RBP15.3■□□□□ 0.04
CDC42SE1-203ENST00000470278 TGM1P22735 817 aa15.3■□□□□ 0.04
CDC42SE1-203ENST00000470278 NDST2P52849 883 aa15.3■□□□□ 0.04
CDC42SE1-203ENST00000470278 SEC13P55735 322 aa15.3■□□□□ 0.04
CDC42SE1-203ENST00000470278 MTAPQ13126 283 aa15.3■□□□□ 0.04
CDC42SE1-203ENST00000470278 CKAP5Q14008 2032 aa15.3■□□□□ 0.04
CDC42SE1-203ENST00000470278 TAZQ16635 292 aa15.3■□□□□ 0.04
CDC42SE1-203ENST00000470278 PTPRNQ16849 979 aa15.3■□□□□ 0.04
CDC42SE1-203ENST00000470278 ZNF528Q3MIS6 628 aa15.3■□□□□ 0.04
CDC42SE1-203ENST00000470278 C2orf27AQ580R0 203 aa15.3■□□□□ 0.04
CDC42SE1-203ENST00000470278 AFMIDQ63HM1 303 aa15.3■□□□□ 0.04
CDC42SE1-203ENST00000470278 SYT13Q7L8C5 426 aa15.3■□□□□ 0.04
CDC42SE1-203ENST00000470278 LZTR1Q8N653 840 aa15.3■□□□□ 0.04
CDC42SE1-203ENST00000470278 RAPGEF5Q92565 580 aa15.3■□□□□ 0.04
CDC42SE1-203ENST00000470278 PSMB7Q99436 277 aa15.3■□□□□ 0.04
CDC42SE1-203ENST00000470278 GABRG3Q99928 467 aa15.3■□□□□ 0.04
CDC42SE1-203ENST00000470278 CALN1Q9BXU9 219 aa15.3■□□□□ 0.04
CDC42SE1-203ENST00000470278 ACE2Q9BYF1 805 aaPredicted RBP15.3■□□□□ 0.04
CDC42SE1-203ENST00000470278 KLC2Q9H0B6 622 aa15.3■□□□□ 0.04
CDC42SE1-203ENST00000470278 NOL6Q9H6R4 1146 aaKnown RBP15.3■□□□□ 0.04
CDC42SE1-203ENST00000470278 LRRC19Q9H756 370 aa15.3■□□□□ 0.04
CDC42SE1-203ENST00000470278 PRDM16Q9HAZ2 1276 aa15.3■□□□□ 0.04
CDC42SE1-203ENST00000470278 KLHL11Q9NVR0 708 aa15.3■□□□□ 0.04
CDC42SE1-203ENST00000470278 MMP17Q9ULZ9 603 aa15.3■□□□□ 0.04
CDC42SE1-203ENST00000470278 PCDHA3Q9Y5H8 950 aa15.3■□□□□ 0.04
CDC42SE1-203ENST00000470278 NYNRINQ9P2P1 1898 aaKnown RBP15.29■□□□□ 0.04
CDC42SE1-203ENST00000470278 NTSR1P30989 418 aa15.29■□□□□ 0.04
CDC42SE1-203ENST00000470278 SERPINB6P35237 376 aa15.29■□□□□ 0.04
CDC42SE1-203ENST00000470278 TIE1P35590 1138 aa15.29■□□□□ 0.04
CDC42SE1-203ENST00000470278 MARCKSL1P49006 195 aa15.29■□□□□ 0.04
CDC42SE1-203ENST00000470278 CCR3P51677 355 aa15.29■□□□□ 0.04
CDC42SE1-203ENST00000470278 ECT2LQ008S8 904 aa15.29■□□□□ 0.04
CDC42SE1-203ENST00000470278 ZNF234Q14588 700 aa15.29■□□□□ 0.04
CDC42SE1-203ENST00000470278 POLD3Q15054 466 aaPredicted RBP15.29■□□□□ 0.04
CDC42SE1-203ENST00000470278 ANKRD20A8PQ5CZ79 823 aa15.29■□□□□ 0.04
CDC42SE1-203ENST00000470278 EOGTQ5NDL2 527 aa15.29■□□□□ 0.04
CDC42SE1-203ENST00000470278 PKN3Q6P5Z2 889 aa15.29■□□□□ 0.04
CDC42SE1-203ENST00000470278 TSSK4Q6SA08 328 aa15.29■□□□□ 0.04
CDC42SE1-203ENST00000470278 TMCO3Q6UWJ1 677 aa15.29■□□□□ 0.04
CDC42SE1-203ENST00000470278 PEX26Q7Z412 305 aa15.29■□□□□ 0.04
CDC42SE1-203ENST00000470278 CHPFQ8IZ52 775 aa15.29■□□□□ 0.04
CDC42SE1-203ENST00000470278 ALLCQ8N6M5 410 aa15.29■□□□□ 0.04
CDC42SE1-203ENST00000470278 NPWQ8N729 165 aa15.29■□□□□ 0.04
CDC42SE1-203ENST00000470278 TRIM58Q8NG06 486 aa15.29■□□□□ 0.04
CDC42SE1-203ENST00000470278 EXD1Q8NHP7 514 aa15.29■□□□□ 0.04
CDC42SE1-203ENST00000470278 PCDH19Q8TAB3 1148 aa15.29■□□□□ 0.04
CDC42SE1-203ENST00000470278 RUBCNQ92622 972 aa15.29■□□□□ 0.04
CDC42SE1-203ENST00000470278 KRT35Q92764 455 aa15.29■□□□□ 0.04
CDC42SE1-203ENST00000470278 ARHGEF2Q92974 986 aaKnown RBP15.29■□□□□ 0.04
CDC42SE1-203ENST00000470278 MYO19Q96H55 970 aa15.29■□□□□ 0.04
CDC42SE1-203ENST00000470278 RBM41Q96IZ5 413 aaKnown RBP15.29■□□□□ 0.04
CDC42SE1-203ENST00000470278 MRGPRX3Q96LB0 322 aa15.29■□□□□ 0.04
CDC42SE1-203ENST00000470278 ALS2CR12Q96Q35 445 aa15.29■□□□□ 0.04
CDC42SE1-203ENST00000470278 TMEM245Q9H330 911 aa15.29■□□□□ 0.04
CDC42SE1-203ENST00000470278 FBXO4Q9UKT5 387 aa15.29■□□□□ 0.04
CDC42SE1-203ENST00000470278 AMFRQ9UKV5 643 aa15.29■□□□□ 0.04
CDC42SE1-203ENST00000470278 PLA2G4CQ9UP65 541 aa15.29■□□□□ 0.04
CDC42SE1-203ENST00000470278 HS3ST2Q9Y278 367 aa15.29■□□□□ 0.04
CDC42SE1-203ENST00000470278 SDK1Q7Z5N4 2213 aa15.28■□□□□ 0.04
CDC42SE1-203ENST00000470278 ANTXRLA6NF34 631 aa15.28■□□□□ 0.04
CDC42SE1-203ENST00000470278 ADAM23O75077 832 aa15.28■□□□□ 0.04
CDC42SE1-203ENST00000470278 ZMPSTE24O75844 475 aa15.28■□□□□ 0.04
CDC42SE1-203ENST00000470278 IL12RB1P42701 662 aa15.28■□□□□ 0.04
CDC42SE1-203ENST00000470278 PEX5P50542 639 aa15.28■□□□□ 0.04
CDC42SE1-203ENST00000470278 MMRN1Q13201 1228 aa15.28■□□□□ 0.04
CDC42SE1-203ENST00000470278 ZFYVE27Q5T4F4 411 aa15.28■□□□□ 0.04
CDC42SE1-203ENST00000470278 EMC10Q5UCC4 262 aa15.28■□□□□ 0.04
CDC42SE1-203ENST00000470278 ARHGAP12Q8IWW6 846 aa15.28■□□□□ 0.04
CDC42SE1-203ENST00000470278 REXO1L1PQ8IX06 675 aa15.28■□□□□ 0.04
CDC42SE1-203ENST00000470278 TXNDC5Q8NBS9 432 aaKnown RBP15.28■□□□□ 0.04
CDC42SE1-203ENST00000470278 OR7D4Q8NG98 312 aa15.28■□□□□ 0.04
CDC42SE1-203ENST00000470278 CYB5D2Q8WUJ1 264 aa15.28■□□□□ 0.04
CDC42SE1-203ENST00000470278 SORCS1Q8WY21 1168 aa15.28■□□□□ 0.04
CDC42SE1-203ENST00000470278 HES6Q96HZ4 224 aa15.28■□□□□ 0.04
CDC42SE1-203ENST00000470278 RNF157Q96PX1 679 aa15.28■□□□□ 0.04
CDC42SE1-203ENST00000470278 ATP13A1Q9HD20 1204 aa15.28■□□□□ 0.04
CDC42SE1-203ENST00000470278 SPATA6Q9NWH7 488 aaPredicted RBP15.28■□□□□ 0.04
CDC42SE1-203ENST00000470278 VPS51Q9UID3 782 aa15.28■□□□□ 0.04
CDC42SE1-203ENST00000470278 ERVW-1Q9UQF0 538 aa15.28■□□□□ 0.04
CDC42SE1-203ENST00000470278 STON1Q9Y6Q2 735 aa15.28■□□□□ 0.04
CDC42SE1-203ENST00000470278 CEP295Q9C0D2 2601 aa15.28■□□□□ 0.04
CDC42SE1-203ENST00000470278 MYO18AQ92614 2054 aaKnown RBP15.28■□□□□ 0.04
CDC42SE1-203ENST00000470278 ATG2BQ96BY7 2078 aa15.28■□□□□ 0.04
CDC42SE1-203ENST00000470278 GOLGA6L9A6NEM1 432 aa15.27■□□□□ 0.04
CDC42SE1-203ENST00000470278 ZSCAN5CA6NGD5 496 aaPredicted RBP15.27■□□□□ 0.04
CDC42SE1-203ENST00000470278 RASA4BC9J798 803 aa15.27■□□□□ 0.04
CDC42SE1-203ENST00000470278 SGK1O00141 431 aa15.27■□□□□ 0.04
CDC42SE1-203ENST00000470278 RASA4O43374 803 aa15.27■□□□□ 0.04
CDC42SE1-203ENST00000470278 ZRANB2O95218 330 aaKnown RBP eCLIP15.27■□□□□ 0.04
CDC42SE1-203ENST00000470278 KLF8O95600 359 aaPredicted RBP15.27■□□□□ 0.04
CDC42SE1-203ENST00000470278 FTCDO95954 541 aa15.27■□□□□ 0.04
CDC42SE1-203ENST00000470278 AMPD1P23109 780 aa15.27■□□□□ 0.04
CDC42SE1-203ENST00000470278 PTPN7P35236 360 aa15.27■□□□□ 0.04
CDC42SE1-203ENST00000470278 ACVRL1P37023 503 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms