RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 ADRA1BP35368 520 aa5.18□□□□□ -1.58
GABPB1-204ENST00000396464 GPD2P43304 727 aa5.18□□□□□ -1.58
GABPB1-204ENST00000396464 CPA2P48052 419 aa5.18□□□□□ -1.58
GABPB1-204ENST00000396464 ZNF81P51508 661 aa5.18□□□□□ -1.58
GABPB1-204ENST00000396464 GMFBP60983 142 aa5.18□□□□□ -1.58
GABPB1-204ENST00000396464 MAP2K1Q02750 393 aaPredicted RBP5.18□□□□□ -1.58
GABPB1-204ENST00000396464 LMAN2Q12907 356 aa5.18□□□□□ -1.58
GABPB1-204ENST00000396464 NPRL3Q12980 569 aa5.18□□□□□ -1.58
GABPB1-204ENST00000396464 BOP1Q14137 746 aaKnown RBP5.18□□□□□ -1.58
GABPB1-204ENST00000396464 TRADDQ15628 312 aa5.18□□□□□ -1.58
GABPB1-204ENST00000396464 ZNF766Q5HY98 468 aa5.18□□□□□ -1.58
GABPB1-204ENST00000396464 SPDYAQ5MJ70 313 aa5.18□□□□□ -1.58
GABPB1-204ENST00000396464 C12orf60Q5U649 245 aa5.18□□□□□ -1.58
GABPB1-204ENST00000396464 ABLIM2Q6H8Q1 611 aa5.18□□□□□ -1.58
GABPB1-204ENST00000396464 GRAMD4Q6IC98 578 aa5.18□□□□□ -1.58
GABPB1-204ENST00000396464 KRTAP5-3Q6L8H2 238 aa5.18□□□□□ -1.58
GABPB1-204ENST00000396464 MARK2Q7KZI7 788 aaKnown RBP5.18□□□□□ -1.58
GABPB1-204ENST00000396464 KCTD20Q7Z5Y7 419 aa5.18□□□□□ -1.58
GABPB1-204ENST00000396464 KBTBD6Q86V97 674 aa5.18□□□□□ -1.58
GABPB1-204ENST00000396464 Q8N1X5 172 aa5.18□□□□□ -1.58
GABPB1-204ENST00000396464 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.18□□□□□ -1.58
GABPB1-204ENST00000396464 CNNM3Q8NE01 707 aa5.18□□□□□ -1.58
GABPB1-204ENST00000396464 OR5AN1Q8NGI8 311 aa5.18□□□□□ -1.58
GABPB1-204ENST00000396464 RNF139Q8WU17 664 aa5.18□□□□□ -1.58
GABPB1-204ENST00000396464 ZNF480Q8WV37 535 aa5.18□□□□□ -1.58
GABPB1-204ENST00000396464 POMGNT1Q8WZA1 660 aa5.18□□□□□ -1.58
GABPB1-204ENST00000396464 C1orf74Q96LT6 269 aa5.18□□□□□ -1.58
GABPB1-204ENST00000396464 WDFY2Q96P53 400 aa5.18□□□□□ -1.58
GABPB1-204ENST00000396464 FAM118BQ9BPY3 351 aa5.18□□□□□ -1.58
GABPB1-204ENST00000396464 SYT17Q9BSW7 474 aa5.18□□□□□ -1.58
GABPB1-204ENST00000396464 SLC5A7Q9GZV3 580 aa5.18□□□□□ -1.58
GABPB1-204ENST00000396464 SLITRK6Q9H5Y7 841 aa5.18□□□□□ -1.58
GABPB1-204ENST00000396464 SPATS2LQ9NUQ6 558 aaKnown RBP5.18□□□□□ -1.58
GABPB1-204ENST00000396464 ABCB8Q9NUT2 735 aa5.18□□□□□ -1.58
GABPB1-204ENST00000396464 TMEM140Q9NV12 185 aa5.18□□□□□ -1.58
GABPB1-204ENST00000396464 ANAPC2Q9UJX6 822 aa5.18□□□□□ -1.58
GABPB1-204ENST00000396464 ADAM29Q9UKF5 820 aa5.18□□□□□ -1.58
GABPB1-204ENST00000396464 CFAP45Q9UL16 551 aa5.18□□□□□ -1.58
GABPB1-204ENST00000396464 RCE1Q9Y256 329 aa5.18□□□□□ -1.58
GABPB1-204ENST00000396464 BTBD3Q9Y2F9 522 aa5.18□□□□□ -1.58
GABPB1-204ENST00000396464 ATP11BQ9Y2G3 1177 aa5.18□□□□□ -1.58
GABPB1-204ENST00000396464 NEU2Q9Y3R4 380 aa5.18□□□□□ -1.58
GABPB1-204ENST00000396464 CLDN16Q9Y5I7 305 aa5.18□□□□□ -1.58
GABPB1-204ENST00000396464 ACTL7AQ9Y615 435 aa5.18□□□□□ -1.58
GABPB1-204ENST00000396464 SQORQ9Y6N5 450 aa5.18□□□□□ -1.58
GABPB1-204ENST00000396464 CCDC187A0A096LP49 1063 aa5.17□□□□□ -1.58
GABPB1-204ENST00000396464 FAM90A7PA6NKC0 464 aa5.17□□□□□ -1.58
GABPB1-204ENST00000396464 SH2D7A6NKC9 451 aaPredicted RBP5.17□□□□□ -1.58
GABPB1-204ENST00000396464 FAM90A22PA8MWA6 464 aa5.17□□□□□ -1.58
GABPB1-204ENST00000396464 FAM90A12PA8MX19 464 aa5.17□□□□□ -1.58
GABPB1-204ENST00000396464 FAM90A23PA8MXZ1 464 aa5.17□□□□□ -1.58
GABPB1-204ENST00000396464 A8MZ25 164 aa5.17□□□□□ -1.58
GABPB1-204ENST00000396464 KCNJ18B7U540 433 aa5.17□□□□□ -1.58
GABPB1-204ENST00000396464 LDLRAD4O15165 306 aa5.17□□□□□ -1.58
GABPB1-204ENST00000396464 RRP9O43818 475 aaKnown RBP5.17□□□□□ -1.58
GABPB1-204ENST00000396464 CER1O95813 267 aa5.17□□□□□ -1.58
GABPB1-204ENST00000396464 XRCC6P12956 609 aaKnown RBP eCLIP5.17□□□□□ -1.58
GABPB1-204ENST00000396464 KRT4P19013 534 aa5.17□□□□□ -1.58
GABPB1-204ENST00000396464 ARL1P40616 181 aaPredicted RBP5.17□□□□□ -1.58
GABPB1-204ENST00000396464 PRKCIP41743 596 aa5.17□□□□□ -1.58
GABPB1-204ENST00000396464 GLRBP48167 497 aa5.17□□□□□ -1.58
GABPB1-204ENST00000396464 CASP9P55211 416 aa5.17□□□□□ -1.58
GABPB1-204ENST00000396464 UFM1P61960 85 aa5.17□□□□□ -1.58
GABPB1-204ENST00000396464 TUBB4BP68371 445 aa5.17□□□□□ -1.58
GABPB1-204ENST00000396464 BEX3Q00994 111 aa5.17□□□□□ -1.58
GABPB1-204ENST00000396464 RALGDSQ12967 914 aa5.17□□□□□ -1.58
GABPB1-204ENST00000396464 KCNJ12Q14500 433 aa5.17□□□□□ -1.58
GABPB1-204ENST00000396464 GEN1Q17RS7 908 aa5.17□□□□□ -1.58
GABPB1-204ENST00000396464 HYAL4Q2M3T9 481 aa5.17□□□□□ -1.58
GABPB1-204ENST00000396464 RABL6Q3YEC7 729 aaPredicted RBP5.17□□□□□ -1.58
GABPB1-204ENST00000396464 CRY2Q49AN0 593 aa5.17□□□□□ -1.58
GABPB1-204ENST00000396464 SLC9B1Q4ZJI4 515 aa5.17□□□□□ -1.58
GABPB1-204ENST00000396464 CAVIN4Q5BKX8 364 aa5.17□□□□□ -1.58
GABPB1-204ENST00000396464 PHF19Q5T6S3 580 aa5.17□□□□□ -1.58
GABPB1-204ENST00000396464 GKAP1Q5VSY0 366 aaPredicted RBP5.17□□□□□ -1.58
GABPB1-204ENST00000396464 DENND1BQ6P3S1 775 aa5.17□□□□□ -1.58
GABPB1-204ENST00000396464 ARHGAP11AQ6P4F7 1023 aa5.17□□□□□ -1.58
GABPB1-204ENST00000396464 ZNF366Q8N895 744 aa5.17□□□□□ -1.58
GABPB1-204ENST00000396464 FSIP1Q8NA03 581 aa5.17□□□□□ -1.58
GABPB1-204ENST00000396464 TMEM116Q8NCL8 245 aa5.17□□□□□ -1.58
GABPB1-204ENST00000396464 NUDT10Q8NFP7 164 aa5.17□□□□□ -1.58
GABPB1-204ENST00000396464 HASPINQ8TF76 798 aa5.17□□□□□ -1.58
GABPB1-204ENST00000396464 ANP32BQ92688 251 aaKnown RBP5.17□□□□□ -1.58
GABPB1-204ENST00000396464 INTS12Q96CB8 462 aaKnown RBP5.17□□□□□ -1.58
GABPB1-204ENST00000396464 MCRS1Q96EZ8 462 aa5.17□□□□□ -1.58
GABPB1-204ENST00000396464 NUDT11Q96G61 164 aa5.17□□□□□ -1.58
GABPB1-204ENST00000396464 ZDHHC12Q96GR4 267 aa5.17□□□□□ -1.58
GABPB1-204ENST00000396464 LRRC37BQ96QE4 947 aa5.17□□□□□ -1.58
GABPB1-204ENST00000396464 LMF1Q96S06 567 aa5.17□□□□□ -1.58
GABPB1-204ENST00000396464 MLPHQ9BV36 600 aaPredicted RBP5.17□□□□□ -1.58
GABPB1-204ENST00000396464 ACPTQ9BZG2 426 aa5.17□□□□□ -1.58
GABPB1-204ENST00000396464 TTC12Q9H892 705 aaPredicted RBP5.17□□□□□ -1.58
GABPB1-204ENST00000396464 SEC61A2Q9H9S3 476 aa5.17□□□□□ -1.58
GABPB1-204ENST00000396464 PDE11AQ9HCR9 933 aa5.17□□□□□ -1.58
GABPB1-204ENST00000396464 CD93Q9NPY3 652 aa5.17□□□□□ -1.58
GABPB1-204ENST00000396464 LIN7CQ9NUP9 197 aaKnown RBP5.17□□□□□ -1.58
GABPB1-204ENST00000396464 TMLHEQ9NVH6 421 aa5.17□□□□□ -1.58
GABPB1-204ENST00000396464 AIPL1Q9NZN9 384 aa5.17□□□□□ -1.58
GABPB1-204ENST00000396464 CFAP97Q9P2B7 532 aa5.17□□□□□ -1.58
GABPB1-204ENST00000396464 RBPJLQ9UBG7 517 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms