RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 COX16Q9P0S2 106 aa14.18□□□□□ -0.14
CXCL12-202ENST00000374426 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.18□□□□□ -0.14
CXCL12-202ENST00000374426 BECN2A8MW95 431 aa14.17□□□□□ -0.14
CXCL12-202ENST00000374426 TRIM38O00635 465 aa14.17□□□□□ -0.14
CXCL12-202ENST00000374426 ALOX15BO15296 676 aa14.17□□□□□ -0.14
CXCL12-202ENST00000374426 MAGEC1O60732 1142 aa14.17□□□□□ -0.14
CXCL12-202ENST00000374426 GNA14O95837 355 aa14.17□□□□□ -0.14
CXCL12-202ENST00000374426 GLI1P08151 1106 aa14.17□□□□□ -0.14
CXCL12-202ENST00000374426 GGCXP38435 758 aa14.17□□□□□ -0.14
CXCL12-202ENST00000374426 STX17P56962 302 aa14.17□□□□□ -0.14
CXCL12-202ENST00000374426 TAS2R38P59533 333 aa14.17□□□□□ -0.14
CXCL12-202ENST00000374426 MORC3Q14149 939 aa14.17□□□□□ -0.14
CXCL12-202ENST00000374426 STAT4Q14765 748 aa14.17□□□□□ -0.14
CXCL12-202ENST00000374426 SETMARQ53H47 684 aaPredicted RBP14.17□□□□□ -0.14
CXCL12-202ENST00000374426 GJB7Q6PEY0 223 aa14.17□□□□□ -0.14
CXCL12-202ENST00000374426 SLC25A45Q8N413 288 aa14.17□□□□□ -0.14
CXCL12-202ENST00000374426 TMEM145Q8NBT3 493 aa14.17□□□□□ -0.14
CXCL12-202ENST00000374426 SNIP1Q8TAD8 396 aaKnown RBP14.17□□□□□ -0.14
CXCL12-202ENST00000374426 RFFLQ8WZ73 363 aa14.17□□□□□ -0.14
CXCL12-202ENST00000374426 RNF34Q969K3 372 aa14.17□□□□□ -0.14
CXCL12-202ENST00000374426 PRORYQ9H606 182 aa14.17□□□□□ -0.14
CXCL12-202ENST00000374426 SLC25A13Q9UJS0 675 aa14.17□□□□□ -0.14
CXCL12-202ENST00000374426 VANGL2Q9ULK5 521 aa14.17□□□□□ -0.14
CXCL12-202ENST00000374426 RAI2Q9Y5P3 530 aa14.17□□□□□ -0.14
CXCL12-202ENST00000374426 HS3ST4Q9Y661 456 aa14.17□□□□□ -0.14
CXCL12-202ENST00000374426 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.16□□□□□ -0.14
CXCL12-202ENST00000374426 C1QTNF3-AMACRE9PGA6 284 aa14.16□□□□□ -0.14
CXCL12-202ENST00000374426 PRAMEF26H0Y7S4 382 aa14.16□□□□□ -0.14
CXCL12-202ENST00000374426 SIGLEC6O43699 453 aa14.16□□□□□ -0.14
CXCL12-202ENST00000374426 HSF2BPO75031 334 aa14.16□□□□□ -0.14
CXCL12-202ENST00000374426 GRAP2O75791 330 aa14.16□□□□□ -0.14
CXCL12-202ENST00000374426 PRB1P04280 392 aa14.16□□□□□ -0.14
CXCL12-202ENST00000374426 CTSLP07711 333 aa14.16□□□□□ -0.14
CXCL12-202ENST00000374426 ACP1P24666 158 aa14.16□□□□□ -0.14
CXCL12-202ENST00000374426 INSM1Q01101 510 aaPredicted RBP14.16□□□□□ -0.14
CXCL12-202ENST00000374426 ZNF177Q13360 481 aaPredicted RBP14.16□□□□□ -0.14
CXCL12-202ENST00000374426 PIP5KL1Q5T9C9 394 aa14.16□□□□□ -0.14
CXCL12-202ENST00000374426 TRIM65Q6PJ69 517 aa14.16□□□□□ -0.14
CXCL12-202ENST00000374426 OLFML1Q6UWY5 402 aa14.16□□□□□ -0.14
CXCL12-202ENST00000374426 LRRC69Q6ZNQ3 347 aa14.16□□□□□ -0.14
CXCL12-202ENST00000374426 ENOSF1Q7L5Y1 443 aa14.16□□□□□ -0.14
CXCL12-202ENST00000374426 C14orf80Q86SX3 495 aa14.16□□□□□ -0.14
CXCL12-202ENST00000374426 CACTIN-AS1Q8N1I8 211 aa14.16□□□□□ -0.14
CXCL12-202ENST00000374426 SH2D3CQ8N5H7 860 aa14.16□□□□□ -0.14
CXCL12-202ENST00000374426 DCBLD1Q8N8Z6 715 aa14.16□□□□□ -0.14
CXCL12-202ENST00000374426 PPP1R13BQ96KQ4 1090 aa14.16□□□□□ -0.14
CXCL12-202ENST00000374426 PPP1R9BQ96SB3 815 aa14.16□□□□□ -0.14
CXCL12-202ENST00000374426 CRACR2AQ9BSW2 395 aa14.16□□□□□ -0.14
CXCL12-202ENST00000374426 SRRTQ9BXP5 876 aaKnown RBP14.16□□□□□ -0.14
CXCL12-202ENST00000374426 PREBQ9HCU5 417 aa14.16□□□□□ -0.14
CXCL12-202ENST00000374426 ASNSD1Q9NWL6 643 aa14.16□□□□□ -0.14
CXCL12-202ENST00000374426 VPS28Q9UK41 221 aa14.16□□□□□ -0.14
CXCL12-202ENST00000374426 CLCA2Q9UQC9 943 aa14.16□□□□□ -0.14
CXCL12-202ENST00000374426 HS3ST2Q9Y278 367 aa14.16□□□□□ -0.14
CXCL12-202ENST00000374426 TBC1D30Q9Y2I9 924 aa14.16□□□□□ -0.14
CXCL12-202ENST00000374426 SHROOM3Q8TF72 1996 aa14.16□□□□□ -0.14
CXCL12-202ENST00000374426 BIN1O00499 593 aa14.15□□□□□ -0.14
CXCL12-202ENST00000374426 RRP8O43159 456 aaKnown RBP14.15□□□□□ -0.14
CXCL12-202ENST00000374426 BNIP3LO60238 219 aa14.15□□□□□ -0.14
CXCL12-202ENST00000374426 BRINP1O60477 761 aa14.15□□□□□ -0.14
CXCL12-202ENST00000374426 PAGE1O75459 146 aa14.15□□□□□ -0.14
CXCL12-202ENST00000374426 CLDN11O75508 207 aa14.15□□□□□ -0.14
CXCL12-202ENST00000374426 MT-CO1P00395 513 aa14.15□□□□□ -0.14
CXCL12-202ENST00000374426 SRCP12931 536 aa14.15□□□□□ -0.14
CXCL12-202ENST00000374426 PRLRP16471 622 aa14.15□□□□□ -0.14
CXCL12-202ENST00000374426 ZNF18P17022 549 aa14.15□□□□□ -0.14
CXCL12-202ENST00000374426 GLDCP23378 1020 aa14.15□□□□□ -0.14
CXCL12-202ENST00000374426 APBA1Q02410 837 aa14.15□□□□□ -0.14
CXCL12-202ENST00000374426 PAK1Q13153 545 aa14.15□□□□□ -0.14
CXCL12-202ENST00000374426 NME3Q13232 169 aa14.15□□□□□ -0.14
CXCL12-202ENST00000374426 ZNF211Q13398 564 aaPredicted RBP14.15□□□□□ -0.14
CXCL12-202ENST00000374426 C5orf22Q49AR2 442 aa14.15□□□□□ -0.14
CXCL12-202ENST00000374426 EFHC1Q5JVL4 640 aa14.15□□□□□ -0.14
CXCL12-202ENST00000374426 FAM183BPQ6ZVS7 135 aa14.15□□□□□ -0.14
CXCL12-202ENST00000374426 PASD1Q8IV76 773 aa14.15□□□□□ -0.14
CXCL12-202ENST00000374426 FGF11Q92914 225 aa14.15□□□□□ -0.14
CXCL12-202ENST00000374426 KLHDC7BQ96G42 594 aa14.15□□□□□ -0.14
CXCL12-202ENST00000374426 MYOCQ99972 504 aa14.15□□□□□ -0.14
CXCL12-202ENST00000374426 CAAP1Q9H8G2 361 aa14.15□□□□□ -0.14
CXCL12-202ENST00000374426 UCKL1Q9NWZ5 548 aa14.15□□□□□ -0.14
CXCL12-202ENST00000374426 A0A1W2PQU0 124 aa14.14□□□□□ -0.15
CXCL12-202ENST00000374426 I6L893 689 aaPredicted RBP14.14□□□□□ -0.15
CXCL12-202ENST00000374426 K7ERQ8 282 aa14.14□□□□□ -0.15
CXCL12-202ENST00000374426 RNF103O00237 685 aa14.14□□□□□ -0.15
CXCL12-202ENST00000374426 SLC31A1O15431 190 aa14.14□□□□□ -0.15
CXCL12-202ENST00000374426 SNAP91O60641 907 aa14.14□□□□□ -0.15
CXCL12-202ENST00000374426 RNGTTO60942 597 aaKnown RBP14.14□□□□□ -0.15
CXCL12-202ENST00000374426 C1QL1O75973 258 aa14.14□□□□□ -0.15
CXCL12-202ENST00000374426 CNTN5O94779 1100 aa14.14□□□□□ -0.15
CXCL12-202ENST00000374426 ERBB2P04626 1255 aa14.14□□□□□ -0.15
CXCL12-202ENST00000374426 THEGLP0DJG4 465 aa14.14□□□□□ -0.15
CXCL12-202ENST00000374426 SLC9A1P19634 815 aa14.14□□□□□ -0.15
CXCL12-202ENST00000374426 DGKAP23743 735 aa14.14□□□□□ -0.15
CXCL12-202ENST00000374426 USP8P40818 1118 aa14.14□□□□□ -0.15
CXCL12-202ENST00000374426 KCNMA1Q12791 1236 aa14.14□□□□□ -0.15
CXCL12-202ENST00000374426 MTA1Q13330 715 aa14.14□□□□□ -0.15
CXCL12-202ENST00000374426 ARHGAP44Q17R89 818 aa14.14□□□□□ -0.15
CXCL12-202ENST00000374426 ZNF284Q2VY69 593 aa14.14□□□□□ -0.15
CXCL12-202ENST00000374426 OTUD1Q5VV17 481 aaPredicted RBP14.14□□□□□ -0.15
CXCL12-202ENST00000374426 C11orf57Q6ZUT1 292 aaPredicted RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms