RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 RENBPP51606 427 aa16.72■□□□□ 0.27
SH3RF1-201ENST00000284637 ZPBP2Q6X784 338 aa16.72■□□□□ 0.27
SH3RF1-201ENST00000284637 PIGWQ7Z7B1 504 aa16.72■□□□□ 0.27
SH3RF1-201ENST00000284637 SVOPQ8N4V2 548 aa16.72■□□□□ 0.27
SH3RF1-201ENST00000284637 ADGRE3Q9BY15 652 aa16.72■□□□□ 0.27
SH3RF1-201ENST00000284637 SETD4Q9NVD3 440 aa16.72■□□□□ 0.27
SH3RF1-201ENST00000284637 TAS2R13Q9NYV9 303 aa16.72■□□□□ 0.27
SH3RF1-201ENST00000284637 H3BRB1 525 aa16.71■□□□□ 0.27
SH3RF1-201ENST00000284637 IFNA14P01570 189 aa16.71■□□□□ 0.27
SH3RF1-201ENST00000284637 SLC26A2P50443 739 aa16.71■□□□□ 0.27
SH3RF1-201ENST00000284637 TUBA4AP68366 448 aa16.71■□□□□ 0.27
SH3RF1-201ENST00000284637 ZDHHC17Q8IUH5 632 aa16.71■□□□□ 0.27
SH3RF1-201ENST00000284637 SYTL1Q8IYJ3 562 aa16.71■□□□□ 0.27
SH3RF1-201ENST00000284637 TUT1Q9H6E5 874 aaKnown RBP16.71■□□□□ 0.27
SH3RF1-201ENST00000284637 KCNMB3Q9NPA1 279 aa16.71■□□□□ 0.27
SH3RF1-201ENST00000284637 TMEM191CA6NGB0 347 aa16.71■□□□□ 0.27
SH3RF1-201ENST00000284637 ABHD2P08910 425 aa16.71■□□□□ 0.27
SH3RF1-201ENST00000284637 ZNF846Q147U1 533 aa16.71■□□□□ 0.27
SH3RF1-201ENST00000284637 MFSD5Q6N075 450 aa16.71■□□□□ 0.27
SH3RF1-201ENST00000284637 UNC5AQ6ZN44 842 aa16.71■□□□□ 0.27
SH3RF1-201ENST00000284637 ZBTB46Q86UZ6 589 aa16.71■□□□□ 0.27
SH3RF1-201ENST00000284637 IRF2BP1Q8IU81 584 aa16.71■□□□□ 0.27
SH3RF1-201ENST00000284637 MBOAT7Q96N66 472 aa16.71■□□□□ 0.27
SH3RF1-201ENST00000284637 TBL1YQ9BQ87 522 aa16.71■□□□□ 0.27
SH3RF1-201ENST00000284637 UGT2B28Q9BY64 529 aa16.71■□□□□ 0.27
SH3RF1-201ENST00000284637 TPRKBQ9Y3C4 175 aa16.71■□□□□ 0.27
SH3RF1-201ENST00000284637 ADAMTS13Q76LX8 1427 aa16.71■□□□□ 0.27
SH3RF1-201ENST00000284637 MBL2P11226 248 aaPredicted RBP16.71■□□□□ 0.27
SH3RF1-201ENST00000284637 VCLP18206 1134 aa16.71■□□□□ 0.27
SH3RF1-201ENST00000284637 CAMK2GQ13555 558 aaPredicted RBP16.71■□□□□ 0.27
SH3RF1-201ENST00000284637 CTXN3Q4LDR2 81 aa16.71■□□□□ 0.27
SH3RF1-201ENST00000284637 EGFLAMQ63HQ2 1017 aa16.71■□□□□ 0.27
SH3RF1-201ENST00000284637 ERAP2Q6P179 960 aa16.71■□□□□ 0.27
SH3RF1-201ENST00000284637 OSBPL11Q9BXB4 747 aa16.71■□□□□ 0.27
SH3RF1-201ENST00000284637 CLK4Q9HAZ1 481 aaKnown RBP16.71■□□□□ 0.27
SH3RF1-201ENST00000284637 BTN3A1O00481 513 aa16.71■□□□□ 0.27
SH3RF1-201ENST00000284637 ACKR2O00590 384 aa16.71■□□□□ 0.27
SH3RF1-201ENST00000284637 HK2P52789 917 aa16.71■□□□□ 0.27
SH3RF1-201ENST00000284637 RPL7AP62424 266 aaKnown RBP16.71■□□□□ 0.27
SH3RF1-201ENST00000284637 GRIK3Q13003 919 aa16.71■□□□□ 0.27
SH3RF1-201ENST00000284637 CYP4Z1Q86W10 505 aa16.71■□□□□ 0.27
SH3RF1-201ENST00000284637 KRT78Q8N1N4 520 aa16.71■□□□□ 0.27
SH3RF1-201ENST00000284637 ASB7Q9H672 318 aa16.71■□□□□ 0.27
SH3RF1-201ENST00000284637 RNF19AQ9NV58 838 aa16.71■□□□□ 0.27
SH3RF1-201ENST00000284637 TRIM17Q9Y577 477 aa16.71■□□□□ 0.27
SH3RF1-201ENST00000284637 CENPXA8MT69 81 aa16.7■□□□□ 0.26
SH3RF1-201ENST00000284637 HACD1B0YJ81 288 aa16.7■□□□□ 0.26
SH3RF1-201ENST00000284637 CCR3P51677 355 aa16.7■□□□□ 0.26
SH3RF1-201ENST00000284637 TRAF3Q13114 568 aa16.7■□□□□ 0.26
SH3RF1-201ENST00000284637 ZIK1Q3SY52 487 aaPredicted RBP16.7■□□□□ 0.26
SH3RF1-201ENST00000284637 C10orf53Q8N6V4 93 aa16.7■□□□□ 0.26
SH3RF1-201ENST00000284637 KCNQ5Q9NR82 932 aa16.7■□□□□ 0.26
SH3RF1-201ENST00000284637 PXDNQ92626 1479 aa16.7■□□□□ 0.26
SH3RF1-201ENST00000284637 SIGLEC16A6NMB1 481 aa16.7■□□□□ 0.26
SH3RF1-201ENST00000284637 RAMP2O60895 175 aa16.7■□□□□ 0.26
SH3RF1-201ENST00000284637 STAU1O95793 577 aaKnown RBP16.7■□□□□ 0.26
SH3RF1-201ENST00000284637 NBPF12Q5TAG4 269 aaPredicted RBP16.7■□□□□ 0.26
SH3RF1-201ENST00000284637 OR56A4Q8NGH8 313 aa16.7■□□□□ 0.26
SH3RF1-201ENST00000284637 MECRQ9BV79 373 aa16.7■□□□□ 0.26
SH3RF1-201ENST00000284637 SEMA4BQ9NPR2 832 aaPredicted RBP16.7■□□□□ 0.26
SH3RF1-201ENST00000284637 KCNH4Q9UQ05 1017 aa16.7■□□□□ 0.26
SH3RF1-201ENST00000284637 H0YC42 278 aa16.7■□□□□ 0.26
SH3RF1-201ENST00000284637 CAPZA2P47755 286 aa16.7■□□□□ 0.26
SH3RF1-201ENST00000284637 RTP1P59025 263 aa16.7■□□□□ 0.26
SH3RF1-201ENST00000284637 THOC7Q6I9Y2 204 aaKnown RBP16.7■□□□□ 0.26
SH3RF1-201ENST00000284637 SETD9Q8NE22 299 aa16.7■□□□□ 0.26
SH3RF1-201ENST00000284637 FBXO30Q8TB52 745 aa16.7■□□□□ 0.26
SH3RF1-201ENST00000284637 RNFT2Q96EX2 444 aa16.7■□□□□ 0.26
SH3RF1-201ENST00000284637 CLEC4MQ9H2X3 399 aaPredicted RBP16.7■□□□□ 0.26
SH3RF1-201ENST00000284637 PREBQ9HCU5 417 aa16.7■□□□□ 0.26
SH3RF1-201ENST00000284637 VPS45Q9NRW7 570 aa16.7■□□□□ 0.26
SH3RF1-201ENST00000284637 GIN1Q9NXP7 522 aa16.7■□□□□ 0.26
SH3RF1-201ENST00000284637 GPR182O15218 404 aa16.7■□□□□ 0.26
SH3RF1-201ENST00000284637 CKMP06732 381 aa16.7■□□□□ 0.26
SH3RF1-201ENST00000284637 RPS12P25398 132 aaKnown RBP16.7■□□□□ 0.26
SH3RF1-201ENST00000284637 TALDO1P37837 337 aa16.7■□□□□ 0.26
SH3RF1-201ENST00000284637 FCHO2Q0JRZ9 810 aa16.7■□□□□ 0.26
SH3RF1-201ENST00000284637 PACS1Q6VY07 963 aa16.7■□□□□ 0.26
SH3RF1-201ENST00000284637 MILR1Q7Z6M3 343 aa16.7■□□□□ 0.26
SH3RF1-201ENST00000284637 ZFPM1Q8IX07 1006 aa16.7■□□□□ 0.26
SH3RF1-201ENST00000284637 OR7A2PQ8NGA2 310 aa16.7■□□□□ 0.26
SH3RF1-201ENST00000284637 OSBPL10Q9BXB5 764 aa16.7■□□□□ 0.26
SH3RF1-201ENST00000284637 ERVK-5Q9HDB9 667 aa16.7■□□□□ 0.26
SH3RF1-201ENST00000284637 TRPC4Q9UBN4 977 aa16.7■□□□□ 0.26
SH3RF1-201ENST00000284637 ANAPC2Q9UJX6 822 aa16.7■□□□□ 0.26
SH3RF1-201ENST00000284637 PCDHB7Q9Y5E2 793 aa16.7■□□□□ 0.26
SH3RF1-201ENST00000284637 SNX8Q9Y5X2 465 aa16.7■□□□□ 0.26
SH3RF1-201ENST00000284637 GPC6Q9Y625 555 aaPredicted RBP16.7■□□□□ 0.26
SH3RF1-201ENST00000284637 EME2A4GXA9 379 aaPredicted RBP16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 PRR23AA6NEV1 266 aa16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 H3BNX3 289 aa16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 ZNF12P17014 697 aa16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 SERPINH1P50454 418 aaKnown RBP16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 NEK3P51956 506 aa16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 NAB1Q13506 487 aa16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 GPR107Q5VW38 600 aa16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 NEPROQ6NW34 567 aa16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 VGLL2Q8N8G2 317 aa16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 SHC3Q92529 594 aa16.69■□□□□ 0.26
SH3RF1-201ENST00000284637 ALG9Q9H6U8 611 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms