RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 ZFRQ96KR1 1074 aaKnown RBP17.05■□□□□ 0.32
TSPAN3-201ENST00000267970 PDGFDQ9GZP0 370 aaPredicted RBP17.05■□□□□ 0.32
TSPAN3-201ENST00000267970 CRISPLD1Q9H336 500 aa17.05■□□□□ 0.32
TSPAN3-201ENST00000267970 KLHL28Q9NXS3 571 aa17.05■□□□□ 0.32
TSPAN3-201ENST00000267970 FAM47E-STBD1D6RA91 191 aa17.05■□□□□ 0.32
TSPAN3-201ENST00000267970 S100A3P33764 101 aa17.05■□□□□ 0.32
TSPAN3-201ENST00000267970 USP46P62068 366 aa17.05■□□□□ 0.32
TSPAN3-201ENST00000267970 MYBPC2Q14324 1141 aa17.05■□□□□ 0.32
TSPAN3-201ENST00000267970 ZCCHC8Q6NZY4 707 aaKnown RBP17.05■□□□□ 0.32
TSPAN3-201ENST00000267970 ZNF540Q8NDQ6 660 aa17.05■□□□□ 0.32
TSPAN3-201ENST00000267970 HPS1Q92902 700 aa17.05■□□□□ 0.32
TSPAN3-201ENST00000267970 YME1L1Q96TA2 773 aa17.05■□□□□ 0.32
TSPAN3-201ENST00000267970 UGT2B28Q9BY64 529 aa17.05■□□□□ 0.32
TSPAN3-201ENST00000267970 TKTL2Q9H0I9 626 aa17.05■□□□□ 0.32
TSPAN3-201ENST00000267970 TNKS2Q9H2K2 1166 aa17.05■□□□□ 0.32
TSPAN3-201ENST00000267970 RRN3Q9NYV6 651 aa17.05■□□□□ 0.32
TSPAN3-201ENST00000267970 BTBD3Q9Y2F9 522 aa17.05■□□□□ 0.32
TSPAN3-201ENST00000267970 FOXO6A8MYZ6 492 aa17.05■□□□□ 0.32
TSPAN3-201ENST00000267970 VCLP18206 1134 aa17.05■□□□□ 0.32
TSPAN3-201ENST00000267970 MIPP30301 263 aa17.05■□□□□ 0.32
TSPAN3-201ENST00000267970 NEK3P51956 506 aa17.05■□□□□ 0.32
TSPAN3-201ENST00000267970 DCTN2Q13561 401 aaKnown RBP17.05■□□□□ 0.32
TSPAN3-201ENST00000267970 MBOAT7Q96N66 472 aa17.05■□□□□ 0.32
TSPAN3-201ENST00000267970 C9orf16Q9BUW7 83 aa17.05■□□□□ 0.32
TSPAN3-201ENST00000267970 TLR10Q9BXR5 811 aa17.05■□□□□ 0.32
TSPAN3-201ENST00000267970 ZDHHC6Q9H6R6 413 aa17.05■□□□□ 0.32
TSPAN3-201ENST00000267970 TRPM5Q9NZQ8 1165 aa17.05■□□□□ 0.32
TSPAN3-201ENST00000267970 U3KQV3 271 aa17.05■□□□□ 0.32
TSPAN3-201ENST00000267970 AVILO75366 819 aa17.04■□□□□ 0.32
TSPAN3-201ENST00000267970 LINC00032P0C843 101 aa17.04■□□□□ 0.32
TSPAN3-201ENST00000267970 TBX4P57082 545 aa17.04■□□□□ 0.32
TSPAN3-201ENST00000267970 NRG1Q02297 640 aaPredicted RBP17.04■□□□□ 0.32
TSPAN3-201ENST00000267970 SPESP1Q6UW49 350 aa17.04■□□□□ 0.32
TSPAN3-201ENST00000267970 CCNJLQ8IV13 435 aa17.04■□□□□ 0.32
TSPAN3-201ENST00000267970 PROX1Q92786 737 aa17.04■□□□□ 0.32
TSPAN3-201ENST00000267970 TMEM159Q96B96 161 aa17.04■□□□□ 0.32
TSPAN3-201ENST00000267970 ZNF446Q9NWS9 450 aa17.04■□□□□ 0.32
TSPAN3-201ENST00000267970 CMTM6Q9NX76 183 aa17.04■□□□□ 0.32
TSPAN3-201ENST00000267970 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.04■□□□□ 0.322e-7■■■■■ 47.7
TSPAN3-201ENST00000267970 KCNH1O95259 989 aa17.04■□□□□ 0.32
TSPAN3-201ENST00000267970 CSF1RP07333 972 aa17.04■□□□□ 0.32
TSPAN3-201ENST00000267970 BDNFP23560 247 aa17.04■□□□□ 0.32
TSPAN3-201ENST00000267970 CDH17Q12864 832 aa17.04■□□□□ 0.32
TSPAN3-201ENST00000267970 DPYSL3Q14195 570 aa17.04■□□□□ 0.32
TSPAN3-201ENST00000267970 TMEM132BQ14DG7 1078 aa17.04■□□□□ 0.32
TSPAN3-201ENST00000267970 RFX4Q33E94 735 aa17.04■□□□□ 0.32
TSPAN3-201ENST00000267970 GPSM1Q86YR5 675 aa17.04■□□□□ 0.32
TSPAN3-201ENST00000267970 OR56A4Q8NGH8 313 aa17.04■□□□□ 0.32
TSPAN3-201ENST00000267970 AENQ8WTP8 325 aaKnown RBP17.04■□□□□ 0.32
TSPAN3-201ENST00000267970 TLR8Q9NR97 1041 aaKnown RBP17.04■□□□□ 0.32
TSPAN3-201ENST00000267970 KBTBD4Q9NVX7 518 aa17.04■□□□□ 0.32
TSPAN3-201ENST00000267970 RABGEF1Q9UJ41 708 aa17.04■□□□□ 0.32
TSPAN3-201ENST00000267970 MED14O60244 1454 aa17.04■□□□□ 0.32
TSPAN3-201ENST00000267970 E5RJQ4 531 aa17.04■□□□□ 0.32
TSPAN3-201ENST00000267970 PRLRP16471 622 aa17.04■□□□□ 0.32
TSPAN3-201ENST00000267970 NR4A1P22736 598 aa17.04■□□□□ 0.32
TSPAN3-201ENST00000267970 PTPN5P54829 565 aa17.04■□□□□ 0.32
TSPAN3-201ENST00000267970 MROH8Q9H579 483 aa17.04■□□□□ 0.32
TSPAN3-201ENST00000267970 REEP1Q9H902 201 aa17.04■□□□□ 0.32
TSPAN3-201ENST00000267970 GDF3Q9NR23 364 aa17.04■□□□□ 0.32
TSPAN3-201ENST00000267970 RWDD3Q9Y3V2 267 aa17.04■□□□□ 0.32
TSPAN3-201ENST00000267970 AK5Q9Y6K8 562 aa17.04■□□□□ 0.32
TSPAN3-201ENST00000267970 DGKBQ9Y6T7 804 aa17.04■□□□□ 0.32
TSPAN3-201ENST00000267970 LACTBL1A8MY62 500 aa17.04■□□□□ 0.32
TSPAN3-201ENST00000267970 RAMP2O60895 175 aa17.04■□□□□ 0.32
TSPAN3-201ENST00000267970 SNRPFP62306 86 aaKnown RBP17.04■□□□□ 0.32
TSPAN3-201ENST00000267970 WDR49Q8IV35 697 aa17.04■□□□□ 0.32
TSPAN3-201ENST00000267970 ZNF34Q8IZ26 560 aa17.04■□□□□ 0.32
TSPAN3-201ENST00000267970 CPA4Q9UI42 421 aa17.04■□□□□ 0.32
TSPAN3-201ENST00000267970 FGRP09769 529 aa17.04■□□□□ 0.32
TSPAN3-201ENST00000267970 STARP49675 285 aa17.04■□□□□ 0.32
TSPAN3-201ENST00000267970 TMEM63BQ5T3F8 832 aa17.04■□□□□ 0.32
TSPAN3-201ENST00000267970 FBXO33Q7Z6M2 555 aa17.04■□□□□ 0.32
TSPAN3-201ENST00000267970 GALNT5Q7Z7M9 940 aa17.04■□□□□ 0.32
TSPAN3-201ENST00000267970 HPS6Q86YV9 775 aa17.04■□□□□ 0.32
TSPAN3-201ENST00000267970 TSPAN14Q8NG11 270 aa17.04■□□□□ 0.32
TSPAN3-201ENST00000267970 ARL15Q9NXU5 204 aa17.04■□□□□ 0.32
TSPAN3-201ENST00000267970 VTI1BQ9UEU0 232 aa17.04■□□□□ 0.32
TSPAN3-201ENST00000267970 HPSEQ9Y251 543 aa17.04■□□□□ 0.32
TSPAN3-201ENST00000267970 A0A0B4J269 797 aa17.03■□□□□ 0.32
TSPAN3-201ENST00000267970 NRP2O60462 931 aa17.03■□□□□ 0.32
TSPAN3-201ENST00000267970 SEC24AO95486 1093 aa17.03■□□□□ 0.32
TSPAN3-201ENST00000267970 SPANXN3Q5MJ09 141 aa17.03■□□□□ 0.32
TSPAN3-201ENST00000267970 CYP4X1Q8N118 509 aa17.03■□□□□ 0.32
TSPAN3-201ENST00000267970 OR7A2PQ8NGA2 310 aa17.03■□□□□ 0.32
TSPAN3-201ENST00000267970 ATXN2LQ8WWM7 1075 aaKnown RBP17.03■□□□□ 0.32
TSPAN3-201ENST00000267970 IGFLR1Q9H665 355 aa17.03■□□□□ 0.32
TSPAN3-201ENST00000267970 NEO1Q92859 1461 aa17.03■□□□□ 0.32
TSPAN3-201ENST00000267970 PBRM1Q86U86 1689 aa17.03■□□□□ 0.32
TSPAN3-201ENST00000267970 GPR182O15218 404 aa17.03■□□□□ 0.32
TSPAN3-201ENST00000267970 EPN2O95208 641 aa17.03■□□□□ 0.32
TSPAN3-201ENST00000267970 ITPK1Q13572 414 aa17.03■□□□□ 0.32
TSPAN3-201ENST00000267970 PDIA6Q15084 440 aa17.03■□□□□ 0.32
TSPAN3-201ENST00000267970 LPCAT4Q643R3 524 aa17.03■□□□□ 0.32
TSPAN3-201ENST00000267970 ARMC8Q8IUR7 673 aa17.03■□□□□ 0.32
TSPAN3-201ENST00000267970 HTRA1Q92743 480 aa17.03■□□□□ 0.32
TSPAN3-201ENST00000267970 MARCH7Q9H992 704 aa17.03■□□□□ 0.32
TSPAN3-201ENST00000267970 ANAPC2Q9UJX6 822 aa17.03■□□□□ 0.32
TSPAN3-201ENST00000267970 ANKRD63C9JTQ0 380 aa17.03■□□□□ 0.32
TSPAN3-201ENST00000267970 BCAP31P51572 246 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms