RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 MTX1Q13505 466 aa5.98□□□□□ -1.45
SF3B3-214ENST00000572365 SLC35G1Q2M3R5 365 aa5.98□□□□□ -1.45
SF3B3-214ENST00000572365 N4BP2L1Q5TBK1 243 aaPredicted RBP5.98□□□□□ -1.45
SF3B3-214ENST00000572365 TSHZ3Q63HK5 1081 aa5.98□□□□□ -1.45
SF3B3-214ENST00000572365 UNC13DQ70J99 1090 aa5.98□□□□□ -1.45
SF3B3-214ENST00000572365 BEND5Q7L4P6 421 aa5.98□□□□□ -1.45
SF3B3-214ENST00000572365 MYLK4Q86YV6 388 aaPredicted RBP5.98□□□□□ -1.45
SF3B3-214ENST00000572365 MPP5Q8N3R9 675 aa5.98□□□□□ -1.45
SF3B3-214ENST00000572365 SDR16C5Q8N3Y7 309 aa5.98□□□□□ -1.45
SF3B3-214ENST00000572365 FAM46DQ8NEK8 389 aa5.98□□□□□ -1.45
SF3B3-214ENST00000572365 OR56A1Q8NGH5 318 aa5.98□□□□□ -1.45
SF3B3-214ENST00000572365 TMEM41AQ96HV5 264 aa5.98□□□□□ -1.45
SF3B3-214ENST00000572365 DCLRE1CQ96SD1 692 aaKnown RBP5.98□□□□□ -1.45
SF3B3-214ENST00000572365 RTP3Q9BQQ7 232 aa5.98□□□□□ -1.45
SF3B3-214ENST00000572365 CD248Q9HCU0 757 aa5.98□□□□□ -1.45
SF3B3-214ENST00000572365 VSX1Q9NZR4 365 aaPredicted RBP5.98□□□□□ -1.45
SF3B3-214ENST00000572365 CDC23Q9UJX2 597 aa5.98□□□□□ -1.45
SF3B3-214ENST00000572365 CDYLQ9Y232 598 aa5.98□□□□□ -1.45
SF3B3-214ENST00000572365 EXOC6BQ9Y2D4 811 aa5.98□□□□□ -1.45
SF3B3-214ENST00000572365 CHST2Q9Y4C5 530 aa5.98□□□□□ -1.45
SF3B3-214ENST00000572365 PCDHGB2Q9Y5G2 931 aa5.98□□□□□ -1.45
SF3B3-214ENST00000572365 BAZ2BQ9UIF8 2168 aaKnown RBP5.98□□□□□ -1.45
SF3B3-214ENST00000572365 ATG2BQ96BY7 2078 aa5.98□□□□□ -1.45
SF3B3-214ENST00000572365 MAST4O15021 2626 aa5.97□□□□□ -1.45
SF3B3-214ENST00000572365 UNC79Q9P2D8 2635 aa5.97□□□□□ -1.45
SF3B3-214ENST00000572365 ASH1LQ9NR48 2969 aaKnown RBP5.97□□□□□ -1.45
SF3B3-214ENST00000572365 A0A1B0GTW7 788 aa5.97□□□□□ -1.45
SF3B3-214ENST00000572365 KRTAP23-1A1A580 65 aa5.97□□□□□ -1.45
SF3B3-214ENST00000572365 AREL1O15033 823 aa5.97□□□□□ -1.45
SF3B3-214ENST00000572365 ADAMTS3O15072 1205 aa5.97□□□□□ -1.45
SF3B3-214ENST00000572365 TTLL1O95922 423 aa5.97□□□□□ -1.45
SF3B3-214ENST00000572365 FOSP01100 380 aaPredicted RBP5.97□□□□□ -1.45
SF3B3-214ENST00000572365 ICAM1P05362 532 aa5.97□□□□□ -1.45
SF3B3-214ENST00000572365 MYCLP12524 364 aaPredicted RBP5.97□□□□□ -1.45
SF3B3-214ENST00000572365 XRCC6P12956 609 aaKnown RBP eCLIP5.97□□□□□ -1.45
SF3B3-214ENST00000572365 TGM1P22735 817 aa5.97□□□□□ -1.45
SF3B3-214ENST00000572365 CD52P31358 61 aa5.97□□□□□ -1.45
SF3B3-214ENST00000572365 ADD2P35612 726 aa5.97□□□□□ -1.45
SF3B3-214ENST00000572365 CARSP49589 748 aaKnown RBP5.97□□□□□ -1.45
SF3B3-214ENST00000572365 TOB1P50616 345 aaPredicted RBP5.97□□□□□ -1.45
SF3B3-214ENST00000572365 SP2Q02086 613 aa5.97□□□□□ -1.45
SF3B3-214ENST00000572365 CSTF1Q05048 431 aaKnown RBP5.97□□□□□ -1.45
SF3B3-214ENST00000572365 ZNF844Q08AG5 666 aa5.97□□□□□ -1.45
SF3B3-214ENST00000572365 LPIN1Q14693 890 aa5.97□□□□□ -1.45
SF3B3-214ENST00000572365 ICAM4Q14773 271 aa5.97□□□□□ -1.45
SF3B3-214ENST00000572365 MPEG1Q2M385 716 aa5.97□□□□□ -1.45
SF3B3-214ENST00000572365 HSDL1Q3SXM5 330 aa5.97□□□□□ -1.45
SF3B3-214ENST00000572365 RNF44Q7L0R7 432 aa5.97□□□□□ -1.45
SF3B3-214ENST00000572365 FAM160B2Q86V87 743 aa5.97□□□□□ -1.45
SF3B3-214ENST00000572365 GAS2L3Q86XJ1 694 aa5.97□□□□□ -1.45
SF3B3-214ENST00000572365 C1orf210Q8IVY1 113 aa5.97□□□□□ -1.45
SF3B3-214ENST00000572365 MAML2Q8IZL2 1156 aaPredicted RBP5.97□□□□□ -1.45
SF3B3-214ENST00000572365 TDRD5Q8NAT2 981 aaKnown RBP5.97□□□□□ -1.45
SF3B3-214ENST00000572365 IPCEF1Q8WWN9 437 aaPredicted RBP5.97□□□□□ -1.45
SF3B3-214ENST00000572365 SPSB4Q96A44 273 aa5.97□□□□□ -1.45
SF3B3-214ENST00000572365 SPATA33Q96N06 139 aa5.97□□□□□ -1.45
SF3B3-214ENST00000572365 MOGAT1Q96PD6 335 aa5.97□□□□□ -1.45
SF3B3-214ENST00000572365 MED15Q96RN5 788 aa5.97□□□□□ -1.45
SF3B3-214ENST00000572365 TRIB1Q96RU8 372 aa5.97□□□□□ -1.45
SF3B3-214ENST00000572365 SMOQ99835 787 aa5.97□□□□□ -1.45
SF3B3-214ENST00000572365 TTLL2Q9BWV7 592 aa5.97□□□□□ -1.45
SF3B3-214ENST00000572365 MS4A7Q9GZW8 240 aaPredicted RBP5.97□□□□□ -1.45
SF3B3-214ENST00000572365 TBC1D17Q9HA65 648 aa5.97□□□□□ -1.45
SF3B3-214ENST00000572365 ENTPD7Q9NQZ7 604 aa5.97□□□□□ -1.45
SF3B3-214ENST00000572365 HSFX1Q9UBD0 423 aa5.97□□□□□ -1.45
SF3B3-214ENST00000572365 STX8Q9UNK0 236 aa5.97□□□□□ -1.45
SF3B3-214ENST00000572365 TICRRQ7Z2Z1 1910 aa5.97□□□□□ -1.45
SF3B3-214ENST00000572365 FREM2Q5SZK8 3169 aa5.97□□□□□ -1.45
SF3B3-214ENST00000572365 SHROOM3Q8TF72 1996 aa5.97□□□□□ -1.45
SF3B3-214ENST00000572365 A0A087WV62 115 aa5.96□□□□□ -1.46
SF3B3-214ENST00000572365 CCDC195A0A1B0GUA6 201 aa5.96□□□□□ -1.46
SF3B3-214ENST00000572365 CCDC78A2IDD5 438 aa5.96□□□□□ -1.46
SF3B3-214ENST00000572365 TRIM24O15164 1050 aa5.96□□□□□ -1.46
SF3B3-214ENST00000572365 ZNF185O15231 689 aa5.96□□□□□ -1.46
SF3B3-214ENST00000572365 PLA2G6O60733 806 aa5.96□□□□□ -1.46
SF3B3-214ENST00000572365 KINO60870 393 aaKnown RBP5.96□□□□□ -1.46
SF3B3-214ENST00000572365 TOP3BO95985 862 aaKnown RBP5.96□□□□□ -1.46
SF3B3-214ENST00000572365 TSPY3P0CV98 308 aa5.96□□□□□ -1.46
SF3B3-214ENST00000572365 TSPY8P0CW00 308 aa5.96□□□□□ -1.46
SF3B3-214ENST00000572365 CD72P21854 359 aa5.96□□□□□ -1.46
SF3B3-214ENST00000572365 EEF1GP26641 437 aaKnown RBP5.96□□□□□ -1.46
SF3B3-214ENST00000572365 MAPK10P53779 464 aa5.96□□□□□ -1.46
SF3B3-214ENST00000572365 RNASE9P60153 205 aaKnown RBP5.96□□□□□ -1.46
SF3B3-214ENST00000572365 SP4Q02446 784 aa5.96□□□□□ -1.46
SF3B3-214ENST00000572365 TDGQ13569 410 aa5.96□□□□□ -1.46
SF3B3-214ENST00000572365 KCNC3Q14003 757 aa5.96□□□□□ -1.46
SF3B3-214ENST00000572365 CCDC6Q16204 474 aa5.96□□□□□ -1.46
SF3B3-214ENST00000572365 TMEM266Q2M3C6 531 aa5.96□□□□□ -1.46
SF3B3-214ENST00000572365 HS1BP3Q53T59 392 aa5.96□□□□□ -1.46
SF3B3-214ENST00000572365 CES5AQ6NT32 575 aa5.96□□□□□ -1.46
SF3B3-214ENST00000572365 TMPRSS9Q7Z410 1059 aa5.96□□□□□ -1.46
SF3B3-214ENST00000572365 THNSL1Q8IYQ7 743 aa5.96□□□□□ -1.46
SF3B3-214ENST00000572365 FANCBQ8NB91 859 aa5.96□□□□□ -1.46
SF3B3-214ENST00000572365 GMCL1P1Q8NEA9 526 aa5.96□□□□□ -1.46
SF3B3-214ENST00000572365 POC1BQ8TC44 478 aa5.96□□□□□ -1.46
SF3B3-214ENST00000572365 FRAT1Q92837 279 aaPredicted RBP5.96□□□□□ -1.46
SF3B3-214ENST00000572365 P2RX5Q93086 422 aa5.96□□□□□ -1.46
SF3B3-214ENST00000572365 LRIG1Q96JA1 1093 aa5.96□□□□□ -1.46
SF3B3-214ENST00000572365 MESP1Q9BRJ9 268 aa5.96□□□□□ -1.46
SF3B3-214ENST00000572365 RTKNQ9BST9 563 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms