RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 SEMA5AQ13591 1074 aa13.96□□□□□ -0.18
PRPF40B-209ENST00000548825 ARL13BQ3SXY8 428 aa13.96□□□□□ -0.18
PRPF40B-209ENST00000548825 SLC9B1Q4ZJI4 515 aa13.96□□□□□ -0.18
PRPF40B-209ENST00000548825 TEDDM1Q5T9Z0 273 aa13.96□□□□□ -0.18
PRPF40B-209ENST00000548825 ATG14Q6ZNE5 492 aa13.96□□□□□ -0.18
PRPF40B-209ENST00000548825 SH2D5Q6ZV89 423 aa13.96□□□□□ -0.18
PRPF40B-209ENST00000548825 OR6P1Q8NGX9 317 aa13.96□□□□□ -0.18
PRPF40B-209ENST00000548825 PHF21BQ96EK2 531 aa13.96□□□□□ -0.18
PRPF40B-209ENST00000548825 PANX3Q96QZ0 392 aa13.96□□□□□ -0.18
PRPF40B-209ENST00000548825 CNTN3Q9P232 1028 aa13.96□□□□□ -0.18
PRPF40B-209ENST00000548825 ST3GAL5Q9UNP4 418 aa13.96□□□□□ -0.18
PRPF40B-209ENST00000548825 NRCAMQ92823 1304 aa13.96□□□□□ -0.18
PRPF40B-209ENST00000548825 RRN3P2A6NIE6 340 aa13.95□□□□□ -0.18
PRPF40B-209ENST00000548825 CSPG5O95196 566 aa13.95□□□□□ -0.18
PRPF40B-209ENST00000548825 PIRTP0C851 137 aa13.95□□□□□ -0.18
PRPF40B-209ENST00000548825 HNRNPLP14866 589 aaKnown RBP eCLIP13.95□□□□□ -0.18
PRPF40B-209ENST00000548825 ARRB2P32121 409 aa13.95□□□□□ -0.18
PRPF40B-209ENST00000548825 SLC12A2P55011 1212 aa13.95□□□□□ -0.18
PRPF40B-209ENST00000548825 PCLAFQ15004 111 aa13.95□□□□□ -0.18
PRPF40B-209ENST00000548825 FAM35AQ86V20 835 aa13.95□□□□□ -0.18
PRPF40B-209ENST00000548825 FICDQ9BVA6 458 aa13.95□□□□□ -0.18
PRPF40B-209ENST00000548825 NFKBIZQ9BYH8 718 aa13.95□□□□□ -0.18
PRPF40B-209ENST00000548825 COG4Q9H9E3 785 aa13.95□□□□□ -0.18
PRPF40B-209ENST00000548825 SSU72Q9NP77 194 aaKnown RBP13.95□□□□□ -0.18
PRPF40B-209ENST00000548825 COPG2Q9UBF2 871 aa13.95□□□□□ -0.18
PRPF40B-209ENST00000548825 EMCNQ9ULC0 261 aa13.95□□□□□ -0.18
PRPF40B-209ENST00000548825 GOLGA4Q13439 2230 aaKnown RBP13.95□□□□□ -0.18
PRPF40B-209ENST00000548825 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.95□□□□□ -0.18
PRPF40B-209ENST00000548825 MYADML2A6NDP7 307 aa13.95□□□□□ -0.18
PRPF40B-209ENST00000548825 XPO1O14980 1071 aaKnown RBP13.95□□□□□ -0.18
PRPF40B-209ENST00000548825 LUC7L3O95232 432 aaKnown RBP13.95□□□□□ -0.18
PRPF40B-209ENST00000548825 THP07101 528 aa13.95□□□□□ -0.18
PRPF40B-209ENST00000548825 SPRP35270 261 aaPredicted RBP13.95□□□□□ -0.18
PRPF40B-209ENST00000548825 THPOP40225 353 aa13.95□□□□□ -0.18
PRPF40B-209ENST00000548825 CNGA3Q16281 694 aa13.95□□□□□ -0.18
PRPF40B-209ENST00000548825 NAPRTQ6XQN6 538 aa13.95□□□□□ -0.18
PRPF40B-209ENST00000548825 PDZD4Q76G19 769 aaPredicted RBP13.95□□□□□ -0.18
PRPF40B-209ENST00000548825 OR52B2Q96RD2 323 aa13.95□□□□□ -0.18
PRPF40B-209ENST00000548825 DNAI2Q9GZS0 605 aa13.95□□□□□ -0.18
PRPF40B-209ENST00000548825 LRRC40Q9H9A6 602 aa13.95□□□□□ -0.18
PRPF40B-209ENST00000548825 CDY2AQ9Y6F7 541 aa13.95□□□□□ -0.18
PRPF40B-209ENST00000548825 PTGESO14684 152 aa13.95□□□□□ -0.18
PRPF40B-209ENST00000548825 SERPINE1P05121 402 aa13.95□□□□□ -0.18
PRPF40B-209ENST00000548825 FGF3P11487 239 aaPredicted RBP13.95□□□□□ -0.18
PRPF40B-209ENST00000548825 GNAZP19086 355 aa13.95□□□□□ -0.18
PRPF40B-209ENST00000548825 CCNHP51946 323 aaPredicted RBP13.95□□□□□ -0.18
PRPF40B-209ENST00000548825 GRM3Q14832 879 aa13.95□□□□□ -0.18
PRPF40B-209ENST00000548825 THEMIS2Q5TEJ8 643 aa13.95□□□□□ -0.18
PRPF40B-209ENST00000548825 TDRD5Q8NAT2 981 aaKnown RBP13.95□□□□□ -0.18
PRPF40B-209ENST00000548825 SH3TC2Q8TF17 1288 aa13.95□□□□□ -0.18
PRPF40B-209ENST00000548825 ELMO2Q96JJ3 720 aa13.95□□□□□ -0.18
PRPF40B-209ENST00000548825 HSFY1Q96LI6 401 aa13.95□□□□□ -0.18
PRPF40B-209ENST00000548825 KLHL5Q96PQ7 755 aa13.95□□□□□ -0.18
PRPF40B-209ENST00000548825 EPAS1Q99814 870 aa13.95□□□□□ -0.18
PRPF40B-209ENST00000548825 SMOQ99835 787 aa13.95□□□□□ -0.18
PRPF40B-209ENST00000548825 PTPN18Q99952 460 aa13.95□□□□□ -0.18
PRPF40B-209ENST00000548825 TUBB6Q9BUF5 446 aa13.95□□□□□ -0.18
PRPF40B-209ENST00000548825 COLEC11Q9BWP8 271 aa13.95□□□□□ -0.18
PRPF40B-209ENST00000548825 SIRPGQ9P1W8 387 aa13.95□□□□□ -0.18
PRPF40B-209ENST00000548825 SLC2A6Q9UGQ3 507 aa13.95□□□□□ -0.18
PRPF40B-209ENST00000548825 DPYSL4O14531 572 aa13.94□□□□□ -0.18
PRPF40B-209ENST00000548825 ANKRD20A4Q4UJ75 823 aa13.94□□□□□ -0.18
PRPF40B-209ENST00000548825 LRRC8BQ6P9F7 803 aa13.94□□□□□ -0.18
PRPF40B-209ENST00000548825 PAQR9Q6ZVX9 377 aa13.94□□□□□ -0.18
PRPF40B-209ENST00000548825 CCNJLQ8IV13 435 aa13.94□□□□□ -0.18
PRPF40B-209ENST00000548825 KBTBD2Q8IY47 623 aa13.94□□□□□ -0.18
PRPF40B-209ENST00000548825 SMG8Q8ND04 991 aaKnown RBP13.94□□□□□ -0.18
PRPF40B-209ENST00000548825 URGCPQ8TCY9 931 aa13.94□□□□□ -0.18
PRPF40B-209ENST00000548825 VPS39Q96JC1 886 aa13.94□□□□□ -0.18
PRPF40B-209ENST00000548825 SYT17Q9BSW7 474 aa13.94□□□□□ -0.18
PRPF40B-209ENST00000548825 SOX13Q9UN79 622 aa13.94□□□□□ -0.18
PRPF40B-209ENST00000548825 ATP6AP2A0A1C7CYW4 349 aa13.94□□□□□ -0.18
PRPF40B-209ENST00000548825 STX16-NPEPL1H3BU86 382 aa13.94□□□□□ -0.18
PRPF40B-209ENST00000548825 PIRO00625 290 aa13.94□□□□□ -0.18
PRPF40B-209ENST00000548825 STRNO43815 780 aa13.94□□□□□ -0.18
PRPF40B-209ENST00000548825 ATP6AP2O75787 350 aa13.94□□□□□ -0.18
PRPF40B-209ENST00000548825 TPSB2P20231 275 aa13.94□□□□□ -0.18
PRPF40B-209ENST00000548825 IDH3AP50213 366 aa13.94□□□□□ -0.18
PRPF40B-209ENST00000548825 HUNKP57058 714 aa13.94□□□□□ -0.18
PRPF40B-209ENST00000548825 ABCE1P61221 599 aaKnown RBP13.94□□□□□ -0.18
PRPF40B-209ENST00000548825 TPSAB1Q15661 275 aa13.94□□□□□ -0.18
PRPF40B-209ENST00000548825 MBLAC2Q68D91 279 aa13.94□□□□□ -0.18
PRPF40B-209ENST00000548825 ZDHHC17Q8IUH5 632 aa13.94□□□□□ -0.18
PRPF40B-209ENST00000548825 PSTKQ8IV42 348 aaKnown RBP13.94□□□□□ -0.18
PRPF40B-209ENST00000548825 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.94□□□□□ -0.18
PRPF40B-209ENST00000548825 MAPK15Q8TD08 544 aa13.94□□□□□ -0.18
PRPF40B-209ENST00000548825 MYLPFQ96A32 169 aa13.94□□□□□ -0.18
PRPF40B-209ENST00000548825 LRRC39Q96DD0 335 aa13.94□□□□□ -0.18
PRPF40B-209ENST00000548825 PIDD1Q9HB75 910 aa13.94□□□□□ -0.18
PRPF40B-209ENST00000548825 NMRAL1Q9HBL8 299 aa13.94□□□□□ -0.18
PRPF40B-209ENST00000548825 SCOCQ9UIL1 159 aa13.94□□□□□ -0.18
PRPF40B-209ENST00000548825 C9JVG2 144 aa13.93□□□□□ -0.18
PRPF40B-209ENST00000548825 TSPAN3O60637 253 aa13.93□□□□□ -0.18
PRPF40B-209ENST00000548825 SOAT2O75908 522 aa13.93□□□□□ -0.18
PRPF40B-209ENST00000548825 PIGNO95427 931 aa13.93□□□□□ -0.18
PRPF40B-209ENST00000548825 C1QAP02745 245 aa13.93□□□□□ -0.18
PRPF40B-209ENST00000548825 AP2B1P63010 937 aa13.93□□□□□ -0.18
PRPF40B-209ENST00000548825 CSHL1Q14406 222 aa13.93□□□□□ -0.18
PRPF40B-209ENST00000548825 FRMD7Q6ZUT3 714 aa13.93□□□□□ -0.18
PRPF40B-209ENST00000548825 STRADAQ7RTN6 431 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms