RNA–Protein interactions for RNA: ENST00000539212.5

PDCD2-207, Transcript of programmed cell death 2, humanhuman

TSL 3

Gene PDCD2, Length 445 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-207ENST00000539212 ABCB4P21439 1286 aa17.76■□□□□ 0.43
PDCD2-207ENST00000539212 C5AR1P21730 350 aa17.76■□□□□ 0.43
PDCD2-207ENST00000539212 PON1P27169 355 aa17.76■□□□□ 0.43
PDCD2-207ENST00000539212 CD38P28907 300 aa17.76■□□□□ 0.43
PDCD2-207ENST00000539212 MAT2AP31153 395 aaKnown RBP17.76■□□□□ 0.43
PDCD2-207ENST00000539212 DNAJC3Q13217 504 aa17.76■□□□□ 0.43
PDCD2-207ENST00000539212 AUHQ13825 339 aaKnown RBP17.76■□□□□ 0.43
PDCD2-207ENST00000539212 COL9A2Q14055 689 aaPredicted RBP17.76■□□□□ 0.43
PDCD2-207ENST00000539212 COL28A1Q2UY09 1125 aa17.76■□□□□ 0.43
PDCD2-207ENST00000539212 RABGAP1LQ5R372 815 aa17.76■□□□□ 0.43
PDCD2-207ENST00000539212 SLC47A2Q86VL8 602 aa17.76■□□□□ 0.43
PDCD2-207ENST00000539212 ALG14Q96F25 216 aa17.76■□□□□ 0.43
PDCD2-207ENST00000539212 SERAC1Q96JX3 654 aa17.76■□□□□ 0.43
PDCD2-207ENST00000539212 APC2O95996 2303 aa17.75■□□□□ 0.43
PDCD2-207ENST00000539212 TBC1D3DA0A087WVF3 549 aa17.75■□□□□ 0.43
PDCD2-207ENST00000539212 TBC1D3IA0A087WXS9 549 aa17.75■□□□□ 0.43
PDCD2-207ENST00000539212 TBC1D3EA0A087X179 549 aa17.75■□□□□ 0.43
PDCD2-207ENST00000539212 TBC1D3KA0A087X1G2 549 aa17.75■□□□□ 0.43
PDCD2-207ENST00000539212 TBC1D3FA6NER0 549 aaPredicted RBP17.75■□□□□ 0.43
PDCD2-207ENST00000539212 TBC1D3LB9A6J9 549 aa17.75■□□□□ 0.43
PDCD2-207ENST00000539212 I6L893 689 aaPredicted RBP17.75■□□□□ 0.43
PDCD2-207ENST00000539212 BNIP3LO60238 219 aa17.75■□□□□ 0.43
PDCD2-207ENST00000539212 HSF2BPO75031 334 aa17.75■□□□□ 0.43
PDCD2-207ENST00000539212 PAGE1O75459 146 aa17.75■□□□□ 0.43
PDCD2-207ENST00000539212 DAB1O75553 588 aa17.75■□□□□ 0.43
PDCD2-207ENST00000539212 FGFR1OPO95684 399 aaKnown RBP17.75■□□□□ 0.43
PDCD2-207ENST00000539212 TBC1D3HP0C7X1 549 aa17.75■□□□□ 0.43
PDCD2-207ENST00000539212 CCR1P32246 355 aa17.75■□□□□ 0.43
PDCD2-207ENST00000539212 CCR5P51681 352 aa17.75■□□□□ 0.43
PDCD2-207ENST00000539212 SLC12A1Q13621 1099 aa17.75■□□□□ 0.43
PDCD2-207ENST00000539212 EXOC3L4Q17RC7 722 aa17.75■□□□□ 0.43
PDCD2-207ENST00000539212 TBC1D3GQ6DHY5 549 aa17.75■□□□□ 0.43
PDCD2-207ENST00000539212 TBC1D3CQ6IPX1 549 aa17.75■□□□□ 0.43
PDCD2-207ENST00000539212 Q6ZVU0 165 aa17.75■□□□□ 0.43
PDCD2-207ENST00000539212 TBC1D3Q8IZP1 549 aaPredicted RBP17.75■□□□□ 0.43
PDCD2-207ENST00000539212 ASNSD1Q9NWL6 643 aa17.75■□□□□ 0.43
PDCD2-207ENST00000539212 KIAA1468Q9P260 1216 aa17.75■□□□□ 0.43
PDCD2-207ENST00000539212 SLC12A6Q9UHW9 1150 aa17.75■□□□□ 0.43
PDCD2-207ENST00000539212 PCDHGC3Q9UN70 934 aa17.75■□□□□ 0.43
PDCD2-207ENST00000539212 CA5BQ9Y2D0 317 aa17.75■□□□□ 0.43
PDCD2-207ENST00000539212 CNTN5O94779 1100 aa17.74■□□□□ 0.43
PDCD2-207ENST00000539212 EPHA8P29322 1005 aaPredicted RBP17.74■□□□□ 0.43
PDCD2-207ENST00000539212 NNMTP40261 264 aa17.74■□□□□ 0.43
PDCD2-207ENST00000539212 MTIF2P46199 727 aaKnown RBP17.74■□□□□ 0.43
PDCD2-207ENST00000539212 PLK1P53350 603 aa17.74■□□□□ 0.43
PDCD2-207ENST00000539212 NXPH1P58417 271 aa17.74■□□□□ 0.43
PDCD2-207ENST00000539212 CYP4F3Q08477 520 aa17.74■□□□□ 0.43
PDCD2-207ENST00000539212 CNTN1Q12860 1018 aa17.74■□□□□ 0.43
PDCD2-207ENST00000539212 SFSWAPQ12872 951 aaKnown RBP17.74■□□□□ 0.43
PDCD2-207ENST00000539212 CAMK2BQ13554 666 aa17.74■□□□□ 0.43
PDCD2-207ENST00000539212 ACCSLQ4AC99 568 aa17.74■□□□□ 0.43
PDCD2-207ENST00000539212 HSP90AA4PQ58FG1 418 aa17.74■□□□□ 0.43
PDCD2-207ENST00000539212 EFHC1Q5JVL4 640 aa17.74■□□□□ 0.43
PDCD2-207ENST00000539212 TTC39BQ5VTQ0 682 aaPredicted RBP17.74■□□□□ 0.43
PDCD2-207ENST00000539212 C11orf57Q6ZUT1 292 aaPredicted RBP17.74■□□□□ 0.43
PDCD2-207ENST00000539212 SPATS2Q86XZ4 545 aaKnown RBP17.74■□□□□ 0.43
PDCD2-207ENST00000539212 EID2Q8N6I1 236 aa17.74■□□□□ 0.43
PDCD2-207ENST00000539212 SAP25Q8TEE9 199 aa17.74■□□□□ 0.43
PDCD2-207ENST00000539212 HNRNPLLQ8WVV9 542 aaKnown RBP17.74■□□□□ 0.43
PDCD2-207ENST00000539212 CNDP2Q96KP4 475 aaKnown RBP17.74■□□□□ 0.43
PDCD2-207ENST00000539212 SPAG5Q96R06 1193 aa17.74■□□□□ 0.43
PDCD2-207ENST00000539212 FEM1AQ9BSK4 669 aa17.74■□□□□ 0.43
PDCD2-207ENST00000539212 CAAP1Q9H8G2 361 aa17.74■□□□□ 0.43
PDCD2-207ENST00000539212 GDF3Q9NR23 364 aa17.74■□□□□ 0.43
PDCD2-207ENST00000539212 TMPRSS4Q9NRS4 437 aa17.74■□□□□ 0.43
PDCD2-207ENST00000539212 PIGVQ9NUD9 493 aa17.74■□□□□ 0.43
PDCD2-207ENST00000539212 SLC25A13Q9UJS0 675 aa17.74■□□□□ 0.43
PDCD2-207ENST00000539212 DNAJC12Q9UKB3 198 aa17.74■□□□□ 0.43
PDCD2-207ENST00000539212 OR51B4Q9Y5P0 310 aa17.74■□□□□ 0.43
PDCD2-207ENST00000539212 TDRD6O60522 2096 aaKnown RBP17.74■□□□□ 0.43
PDCD2-207ENST00000539212 TRABD2BA6NFA1 517 aa17.73■□□□□ 0.43
PDCD2-207ENST00000539212 M0QYT0 321 aa17.73■□□□□ 0.43
PDCD2-207ENST00000539212 RNF103O00237 685 aa17.73■□□□□ 0.43
PDCD2-207ENST00000539212 FOXN3O00409 490 aaPredicted RBP17.73■□□□□ 0.43
PDCD2-207ENST00000539212 ENC1O14682 589 aa17.73■□□□□ 0.43
PDCD2-207ENST00000539212 ADCY5O95622 1261 aa17.73■□□□□ 0.43
PDCD2-207ENST00000539212 ITGAVP06756 1048 aa17.73■□□□□ 0.43
PDCD2-207ENST00000539212 GLI1P08151 1106 aa17.73■□□□□ 0.43
PDCD2-207ENST00000539212 SLC2A3P11169 496 aa17.73■□□□□ 0.43
PDCD2-207ENST00000539212 CLCN1P35523 988 aa17.73■□□□□ 0.43
PDCD2-207ENST00000539212 SULT2A1Q06520 285 aa17.73■□□□□ 0.43
PDCD2-207ENST00000539212 BNIP3Q12983 259 aa17.73■□□□□ 0.43
PDCD2-207ENST00000539212 SMAD1Q15797 465 aaKnown RBP17.73■□□□□ 0.43
PDCD2-207ENST00000539212 INAVAQ3KP66 663 aa17.73■□□□□ 0.43
PDCD2-207ENST00000539212 ALFQ53S48 1182 aa17.73■□□□□ 0.43
PDCD2-207ENST00000539212 AGBL4Q5VU57 503 aa17.73■□□□□ 0.43
PDCD2-207ENST00000539212 GALNT15Q8N3T1 639 aa17.73■□□□□ 0.43
PDCD2-207ENST00000539212 OR8D1Q8WZ84 308 aa17.73■□□□□ 0.43
PDCD2-207ENST00000539212 FAM131CQ96AQ9 280 aa17.73■□□□□ 0.43
PDCD2-207ENST00000539212 SIK2Q9H0K1 926 aa17.73■□□□□ 0.43
PDCD2-207ENST00000539212 ARHGAP20Q9P2F6 1191 aa17.73■□□□□ 0.43
PDCD2-207ENST00000539212 VPS28Q9UK41 221 aa17.73■□□□□ 0.43
PDCD2-207ENST00000539212 ACACAQ13085 2346 aa17.73■□□□□ 0.43
PDCD2-207ENST00000539212 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.72■□□□□ 0.43
PDCD2-207ENST00000539212 K7ERQ8 282 aa17.72■□□□□ 0.43
PDCD2-207ENST00000539212 TLR4O00206 839 aa17.72■□□□□ 0.43
PDCD2-207ENST00000539212 LATO43561 262 aa17.72■□□□□ 0.43
PDCD2-207ENST00000539212 PLRG1O43660 514 aaKnown RBP17.72■□□□□ 0.43
PDCD2-207ENST00000539212 ATP9BO43861 1147 aa17.72■□□□□ 0.43
PDCD2-207ENST00000539212 DFNA5O60443 496 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms