RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 WDR60Q8WVS4 1066 aa11.83□□□□□ -0.52
USP35-207ENST00000530546 RNF34Q969K3 372 aa11.83□□□□□ -0.52
USP35-207ENST00000530546 SPATA13Q96N96 652 aa11.83□□□□□ -0.52
USP35-207ENST00000530546 RTP3Q9BQQ7 232 aa11.83□□□□□ -0.52
USP35-207ENST00000530546 TIMMDC1Q9NPL8 285 aa11.83□□□□□ -0.52
USP35-207ENST00000530546 TMLHEQ9NVH6 421 aa11.83□□□□□ -0.52
USP35-207ENST00000530546 NDE1Q9NXR1 346 aa11.83□□□□□ -0.52
USP35-207ENST00000530546 FETUBQ9UGM5 382 aa11.83□□□□□ -0.52
USP35-207ENST00000530546 A0A0J9YVX5 310 aa11.82□□□□□ -0.52
USP35-207ENST00000530546 ODC1P11926 461 aa11.82□□□□□ -0.52
USP35-207ENST00000530546 ANPEPP15144 967 aa11.82□□□□□ -0.52
USP35-207ENST00000530546 ERCC2P18074 760 aa11.82□□□□□ -0.52
USP35-207ENST00000530546 PSMB4P28070 264 aa11.82□□□□□ -0.52
USP35-207ENST00000530546 PCSK1P29120 753 aa11.82□□□□□ -0.52
USP35-207ENST00000530546 SERPINB3P29508 390 aa11.82□□□□□ -0.52
USP35-207ENST00000530546 TPI1P60174 286 aa11.82□□□□□ -0.52
USP35-207ENST00000530546 AP2B1P63010 937 aa11.82□□□□□ -0.52
USP35-207ENST00000530546 OLIG2Q13516 323 aa11.82□□□□□ -0.52
USP35-207ENST00000530546 LRRC6Q86X45 466 aa11.82□□□□□ -0.52
USP35-207ENST00000530546 METTL23Q86XA0 190 aa11.82□□□□□ -0.52
USP35-207ENST00000530546 BANPQ8N9N5 519 aa11.82□□□□□ -0.52
USP35-207ENST00000530546 ZNF75CPQ92670 426 aaPredicted RBP11.82□□□□□ -0.52
USP35-207ENST00000530546 GFM2Q969S9 779 aaKnown RBP11.82□□□□□ -0.52
USP35-207ENST00000530546 NT5C3BQ969T7 300 aa11.82□□□□□ -0.52
USP35-207ENST00000530546 TTC17Q96AE7 1141 aa11.82□□□□□ -0.52
USP35-207ENST00000530546 DGCR14Q96DF8 476 aaKnown RBP11.82□□□□□ -0.52
USP35-207ENST00000530546 SMARCD1Q96GM5 515 aa11.82□□□□□ -0.52
USP35-207ENST00000530546 MPP4Q96JB8 637 aa11.82□□□□□ -0.52
USP35-207ENST00000530546 SIGLEC10Q96LC7 697 aa11.82□□□□□ -0.52
USP35-207ENST00000530546 AGAP3Q96P47 875 aa11.82□□□□□ -0.52
USP35-207ENST00000530546 FAM111AQ96PZ2 611 aa11.82□□□□□ -0.52
USP35-207ENST00000530546 UPF3AQ9H1J1 476 aaKnown RBP11.82□□□□□ -0.52
USP35-207ENST00000530546 MAGED2Q9UNF1 606 aaPredicted RBP11.82□□□□□ -0.52
USP35-207ENST00000530546 WASF2Q9Y6W5 498 aa11.82□□□□□ -0.52
USP35-207ENST00000530546 WDR27A2RRH5 827 aa11.82□□□□□ -0.52
USP35-207ENST00000530546 SPAG6O75602 509 aa11.82□□□□□ -0.52
USP35-207ENST00000530546 STK10O94804 968 aaKnown RBP11.82□□□□□ -0.52
USP35-207ENST00000530546 FBXO21O94952 628 aa11.82□□□□□ -0.52
USP35-207ENST00000530546 APOEP02649 317 aa11.82□□□□□ -0.52
USP35-207ENST00000530546 CSH1P0DML2 217 aa11.82□□□□□ -0.52
USP35-207ENST00000530546 CSH2P0DML3 217 aa11.82□□□□□ -0.52
USP35-207ENST00000530546 RPL26P61254 145 aaKnown RBP11.82□□□□□ -0.52
USP35-207ENST00000530546 C6orf163Q5TEZ5 329 aa11.82□□□□□ -0.52
USP35-207ENST00000530546 PID1Q7Z2X4 250 aa11.82□□□□□ -0.52
USP35-207ENST00000530546 NET1Q7Z628 596 aaPredicted RBP11.82□□□□□ -0.52
USP35-207ENST00000530546 SLC26A11Q86WA9 606 aa11.82□□□□□ -0.52
USP35-207ENST00000530546 PGLYRP2Q96PD5 576 aa11.82□□□□□ -0.52
USP35-207ENST00000530546 FRMD8Q9BZ67 464 aaPredicted RBP11.82□□□□□ -0.52
USP35-207ENST00000530546 WDR6Q9NNW5 1121 aaKnown RBP11.82□□□□□ -0.52
USP35-207ENST00000530546 CNGB3Q9NQW8 809 aa11.82□□□□□ -0.52
USP35-207ENST00000530546 ARL8BQ9NVJ2 186 aa11.82□□□□□ -0.52
USP35-207ENST00000530546 SLC17A6Q9P2U8 582 aa11.82□□□□□ -0.52
USP35-207ENST00000530546 SH3GLB1Q9Y371 365 aa11.82□□□□□ -0.52
USP35-207ENST00000530546 MYO18AQ92614 2054 aaKnown RBP11.82□□□□□ -0.52
USP35-207ENST00000530546 RNASEH1O60930 286 aaKnown RBP11.82□□□□□ -0.52
USP35-207ENST00000530546 IDO1P14902 403 aa11.82□□□□□ -0.52
USP35-207ENST00000530546 RPL9P32969 192 aaKnown RBP11.82□□□□□ -0.52
USP35-207ENST00000530546 OVGP1Q12889 678 aa11.82□□□□□ -0.52
USP35-207ENST00000530546 CDC16Q13042 620 aa11.82□□□□□ -0.52
USP35-207ENST00000530546 CBX3Q13185 183 aa11.82□□□□□ -0.52
USP35-207ENST00000530546 PDK1Q15118 436 aa11.82□□□□□ -0.52
USP35-207ENST00000530546 TRMT5Q32P41 509 aaKnown RBP11.82□□□□□ -0.52
USP35-207ENST00000530546 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.82□□□□□ -0.52
USP35-207ENST00000530546 CFAP157Q5JU67 520 aa11.82□□□□□ -0.52
USP35-207ENST00000530546 MRPL10Q7Z7H8 261 aaKnown RBP11.82□□□□□ -0.52
USP35-207ENST00000530546 SMYD1Q8NB12 490 aa11.82□□□□□ -0.52
USP35-207ENST00000530546 MCUQ8NE86 351 aa11.82□□□□□ -0.52
USP35-207ENST00000530546 EBNA1BP2Q99848 306 aaKnown RBP11.82□□□□□ -0.52
USP35-207ENST00000530546 SLC13A1Q9BZW2 595 aa11.82□□□□□ -0.52
USP35-207ENST00000530546 NPHS2Q9NP85 383 aa11.82□□□□□ -0.52
USP35-207ENST00000530546 KLHL8Q9P2G9 620 aaPredicted RBP11.82□□□□□ -0.52
USP35-207ENST00000530546 TLL2Q9Y6L7 1015 aa11.82□□□□□ -0.52
USP35-207ENST00000530546 HHLA1C9JL84 531 aa11.81□□□□□ -0.52
USP35-207ENST00000530546 TPSB2P20231 275 aa11.81□□□□□ -0.52
USP35-207ENST00000530546 MGAT1P26572 445 aa11.81□□□□□ -0.52
USP35-207ENST00000530546 MAGEA6P43360 314 aa11.81□□□□□ -0.52
USP35-207ENST00000530546 SEMA5AQ13591 1074 aa11.81□□□□□ -0.52
USP35-207ENST00000530546 TPSAB1Q15661 275 aa11.81□□□□□ -0.52
USP35-207ENST00000530546 FAM91A1Q658Y4 838 aa11.81□□□□□ -0.52
USP35-207ENST00000530546 CES3Q6UWW8 571 aa11.81□□□□□ -0.52
USP35-207ENST00000530546 LRRTM3Q86VH5 581 aa11.81□□□□□ -0.52
USP35-207ENST00000530546 ZNF567Q8N184 647 aa11.81□□□□□ -0.52
USP35-207ENST00000530546 OR10T2Q8NGX3 314 aa11.81□□□□□ -0.52
USP35-207ENST00000530546 SCAMP5Q8TAC9 235 aa11.81□□□□□ -0.52
USP35-207ENST00000530546 PGBD4Q96DM1 585 aa11.81□□□□□ -0.52
USP35-207ENST00000530546 TKTL2Q9H0I9 626 aa11.81□□□□□ -0.52
USP35-207ENST00000530546 GPAMQ9HCL2 828 aa11.81□□□□□ -0.52
USP35-207ENST00000530546 RNF186Q9NXI6 227 aa11.81□□□□□ -0.52
USP35-207ENST00000530546 TAS2R1Q9NYW7 299 aa11.81□□□□□ -0.52
USP35-207ENST00000530546 RCOR3Q9P2K3 495 aaPredicted RBP11.81□□□□□ -0.52
USP35-207ENST00000530546 SSX2IPQ9Y2D8 614 aa11.81□□□□□ -0.52
USP35-207ENST00000530546 PTCH2Q9Y6C5 1203 aa11.81□□□□□ -0.52
USP35-207ENST00000530546 SCN10AQ9Y5Y9 1956 aa11.81□□□□□ -0.52
USP35-207ENST00000530546 A0A0U1RQF3 1178 aa11.81□□□□□ -0.52
USP35-207ENST00000530546 HACD1B0YJ81 288 aa11.81□□□□□ -0.52
USP35-207ENST00000530546 OPHN1O60890 802 aa11.81□□□□□ -0.52
USP35-207ENST00000530546 USP12O75317 370 aa11.81□□□□□ -0.52
USP35-207ENST00000530546 OR4Q2P0C623 313 aa11.81□□□□□ -0.52
USP35-207ENST00000530546 PHEXP78562 749 aa11.81□□□□□ -0.52
USP35-207ENST00000530546 XIAPP98170 497 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms