RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 PPARGC1AQ9UBK2 798 aaKnown RBP17.23■□□□□ 0.35
SREK1-212ENST00000522912 SMG5Q9UPR3 1016 aaKnown RBP17.23■□□□□ 0.35
SREK1-212ENST00000522912 IQANK1A0A1B0GTG1 560 aa17.22■□□□□ 0.35
SREK1-212ENST00000522912 ERI2A8K979 691 aaKnown RBP17.22■□□□□ 0.35
SREK1-212ENST00000522912 KIAA0355O15063 1070 aa17.22■□□□□ 0.35
SREK1-212ENST00000522912 CACNG3O60359 315 aa17.22■□□□□ 0.35
SREK1-212ENST00000522912 HMGA1P17096 107 aaKnown RBP17.22■□□□□ 0.35
SREK1-212ENST00000522912 NADSYN1Q6IA69 706 aa17.22■□□□□ 0.35
SREK1-212ENST00000522912 CPLX4Q7Z7G2 160 aa17.22■□□□□ 0.35
SREK1-212ENST00000522912 UMODL1-AS1Q8N2C9 162 aa17.22■□□□□ 0.35
SREK1-212ENST00000522912 SGSM3Q96HU1 749 aa17.22■□□□□ 0.35
SREK1-212ENST00000522912 KLF6Q99612 283 aaPredicted RBP17.22■□□□□ 0.35
SREK1-212ENST00000522912 SSU72Q9NP77 194 aaKnown RBP17.22■□□□□ 0.35
SREK1-212ENST00000522912 TMEM248Q9NWD8 314 aa17.22■□□□□ 0.35
SREK1-212ENST00000522912 UBP1Q9NZI7 540 aa17.22■□□□□ 0.35
SREK1-212ENST00000522912 ZNF180Q9UJW8 692 aa17.22■□□□□ 0.35
SREK1-212ENST00000522912 GOLGA6L7A0A1B0GV03 622 aa17.21■□□□□ 0.35
SREK1-212ENST00000522912 GOLGA8RI6L899 631 aa17.21■□□□□ 0.35
SREK1-212ENST00000522912 EBAG9O00559 213 aa17.21■□□□□ 0.35
SREK1-212ENST00000522912 ALDH1A2O94788 518 aa17.21■□□□□ 0.35
SREK1-212ENST00000522912 ASMTLO95671 621 aa17.21■□□□□ 0.35
SREK1-212ENST00000522912 PGAM1P18669 254 aa17.21■□□□□ 0.35
SREK1-212ENST00000522912 KCNQ1P51787 676 aa17.21■□□□□ 0.35
SREK1-212ENST00000522912 NUGGCQ68CJ6 796 aa17.21■□□□□ 0.35
SREK1-212ENST00000522912 CYS1Q717R9 158 aa17.21■□□□□ 0.35
SREK1-212ENST00000522912 KLHDC8BQ8IXV7 354 aa17.21■□□□□ 0.35
SREK1-212ENST00000522912 CMTR2Q8IYT2 770 aaKnown RBP17.21■□□□□ 0.35
SREK1-212ENST00000522912 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.21■□□□□ 0.35
SREK1-212ENST00000522912 MYEOVQ96EZ4 313 aa17.21■□□□□ 0.35
SREK1-212ENST00000522912 SERAC1Q96JX3 654 aa17.21■□□□□ 0.35
SREK1-212ENST00000522912 SPG21Q9NZD8 308 aa17.21■□□□□ 0.35
SREK1-212ENST00000522912 FNIP2Q9P278 1114 aa17.21■□□□□ 0.35
SREK1-212ENST00000522912 ZNF840PA6NDX5 716 aa17.21■□□□□ 0.35
SREK1-212ENST00000522912 DRGXA6NNA5 263 aa17.21■□□□□ 0.35
SREK1-212ENST00000522912 GJB5O95377 273 aa17.21■□□□□ 0.35
SREK1-212ENST00000522912 MT-ND3P03897 115 aa17.21■□□□□ 0.35
SREK1-212ENST00000522912 VIMP08670 466 aaKnown RBP17.21■□□□□ 0.35
SREK1-212ENST00000522912 RAG1P15918 1043 aa17.21■□□□□ 0.35
SREK1-212ENST00000522912 CA4P22748 312 aa17.21■□□□□ 0.35
SREK1-212ENST00000522912 CRYMQ14894 314 aa17.21■□□□□ 0.35
SREK1-212ENST00000522912 SLC1A5Q15758 541 aa17.21■□□□□ 0.35
SREK1-212ENST00000522912 TTC39BQ5VTQ0 682 aaPredicted RBP17.21■□□□□ 0.35
SREK1-212ENST00000522912 SNX30Q5VWJ9 437 aa17.21■□□□□ 0.35
SREK1-212ENST00000522912 TPGS2Q68CL5 300 aa17.21■□□□□ 0.35
SREK1-212ENST00000522912 SH2D5Q6ZV89 423 aa17.21■□□□□ 0.35
SREK1-212ENST00000522912 ZNF276Q8N554 614 aa17.21■□□□□ 0.35
SREK1-212ENST00000522912 SPATA22Q8NHS9 363 aa17.21■□□□□ 0.35
SREK1-212ENST00000522912 AUTS2Q8WXX7 1259 aa17.21■□□□□ 0.35
SREK1-212ENST00000522912 ZNF512Q96ME7 567 aaPredicted RBP17.21■□□□□ 0.35
SREK1-212ENST00000522912 APOL2Q9BQE5 337 aa17.21■□□□□ 0.35
SREK1-212ENST00000522912 CYP4F11Q9HBI6 524 aa17.21■□□□□ 0.35
SREK1-212ENST00000522912 GLOD4Q9HC38 313 aa17.21■□□□□ 0.35
SREK1-212ENST00000522912 ZNF212Q9UDV6 495 aa17.21■□□□□ 0.35
SREK1-212ENST00000522912 IPO11Q9UI26 975 aaKnown RBP17.21■□□□□ 0.35
SREK1-212ENST00000522912 PRDM4Q9UKN5 801 aa17.21■□□□□ 0.35
SREK1-212ENST00000522912 ANAPC1Q9H1A4 1944 aa17.21■□□□□ 0.35
SREK1-212ENST00000522912 TCP11X1B4DZS4 312 aa17.2■□□□□ 0.34
SREK1-212ENST00000522912 LAG3P18627 525 aa17.2■□□□□ 0.34
SREK1-212ENST00000522912 NDST2P52849 883 aa17.2■□□□□ 0.34
SREK1-212ENST00000522912 CES3Q6UWW8 571 aa17.2■□□□□ 0.34
SREK1-212ENST00000522912 DDX53Q86TM3 631 aaKnown RBP17.2■□□□□ 0.34
SREK1-212ENST00000522912 LRRC49Q8IUZ0 686 aa17.2■□□□□ 0.34
SREK1-212ENST00000522912 CCNJLQ8IV13 435 aa17.2■□□□□ 0.34
SREK1-212ENST00000522912 BANPQ8N9N5 519 aa17.2■□□□□ 0.34
SREK1-212ENST00000522912 OVCA2Q8WZ82 227 aa17.2■□□□□ 0.34
SREK1-212ENST00000522912 HMCESQ96FZ2 354 aa17.2■□□□□ 0.34
SREK1-212ENST00000522912 HSFX1Q9UBD0 423 aa17.2■□□□□ 0.34
SREK1-212ENST00000522912 DNMT3LQ9UJW3 386 aa17.2■□□□□ 0.34
SREK1-212ENST00000522912 GRID1Q9ULK0 1009 aa17.2■□□□□ 0.34
SREK1-212ENST00000522912 HBS1LQ9Y450 684 aaKnown RBP17.2■□□□□ 0.34
SREK1-212ENST00000522912 YIPF1Q9Y548 306 aa17.2■□□□□ 0.34
SREK1-212ENST00000522912 TRIM49D1C9J1S8 452 aa17.2■□□□□ 0.34
SREK1-212ENST00000522912 PEX11BO96011 259 aa17.2■□□□□ 0.34
SREK1-212ENST00000522912 HLA-DQB2P05538 268 aa17.2■□□□□ 0.34
SREK1-212ENST00000522912 FOXN2P32314 431 aa17.2■□□□□ 0.34
SREK1-212ENST00000522912 ATP5C1P36542 298 aaKnown RBP17.2■□□□□ 0.34
SREK1-212ENST00000522912 KPNA1P52294 538 aaPredicted RBP17.2■□□□□ 0.34
SREK1-212ENST00000522912 PRPSAP1Q14558 356 aa17.2■□□□□ 0.34
SREK1-212ENST00000522912 TIGD7Q6NT04 549 aaPredicted RBP17.2■□□□□ 0.34
SREK1-212ENST00000522912 CHSY1Q86X52 802 aa17.2■□□□□ 0.34
SREK1-212ENST00000522912 CIR1Q86X95 450 aaPredicted RBP17.2■□□□□ 0.34
SREK1-212ENST00000522912 PDZD8Q8NEN9 1154 aa17.2■□□□□ 0.34
SREK1-212ENST00000522912 TTC17Q96AE7 1141 aa17.2■□□□□ 0.34
SREK1-212ENST00000522912 SEC16BQ96JE7 1060 aa17.2■□□□□ 0.34
SREK1-212ENST00000522912 MAGEB18Q96M61 343 aa17.2■□□□□ 0.34
SREK1-212ENST00000522912 FCRL3Q96P31 734 aaPredicted RBP17.2■□□□□ 0.34
SREK1-212ENST00000522912 FCRL5Q96RD9 977 aa17.2■□□□□ 0.34
SREK1-212ENST00000522912 PAIP2Q9BPZ3 127 aaKnown RBP17.2■□□□□ 0.34
SREK1-212ENST00000522912 NAT9Q9BTE0 207 aa17.2■□□□□ 0.34
SREK1-212ENST00000522912 LRRC40Q9H9A6 602 aa17.2■□□□□ 0.34
SREK1-212ENST00000522912 RBM22Q9NW64 420 aaKnown RBP eCLIP17.2■□□□□ 0.341e-6■■■■□ 23.6
SREK1-212ENST00000522912 SNRPAP09012 282 aaKnown RBP17.19■□□□□ 0.34
SREK1-212ENST00000522912 HSPA8P11142 646 aaKnown RBP17.19■□□□□ 0.34
SREK1-212ENST00000522912 SLC18A2Q05940 514 aa17.19■□□□□ 0.34
SREK1-212ENST00000522912 NIPAL4Q0D2K0 466 aa17.19■□□□□ 0.34
SREK1-212ENST00000522912 RAB33AQ14088 237 aa17.19■□□□□ 0.34
SREK1-212ENST00000522912 CERCAMQ5T4B2 595 aa17.19■□□□□ 0.34
SREK1-212ENST00000522912 NECAB2Q7Z6G3 386 aa17.19■□□□□ 0.34
SREK1-212ENST00000522912 DNAAF3Q8N9W5 541 aa17.19■□□□□ 0.34
SREK1-212ENST00000522912 MYRFLQ96LU7 910 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms