RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.54■□□□□ 0.88
UBE2D3-220ENST00000505307 AJAP1Q9UKB5 411 aaPredicted RBP20.54■□□□□ 0.88
UBE2D3-220ENST00000505307 TBC1D30Q9Y2I9 924 aa20.54■□□□□ 0.88
UBE2D3-220ENST00000505307 SRRM3A6NNA2 597 aaPredicted RBP20.53■□□□□ 0.88
UBE2D3-220ENST00000505307 H0Y8X5 98 aa20.53■□□□□ 0.88
UBE2D3-220ENST00000505307 YKT6O15498 198 aa20.53■□□□□ 0.88
UBE2D3-220ENST00000505307 TNFSF14O43557 240 aa20.53■□□□□ 0.88
UBE2D3-220ENST00000505307 DKK1O94907 266 aa20.53■□□□□ 0.88
UBE2D3-220ENST00000505307 CD38P28907 300 aa20.53■□□□□ 0.88
UBE2D3-220ENST00000505307 GABRB2P47870 512 aa20.53■□□□□ 0.88
UBE2D3-220ENST00000505307 CXCR3P49682 368 aa20.53■□□□□ 0.88
UBE2D3-220ENST00000505307 ADPRHP54922 357 aa20.53■□□□□ 0.88
UBE2D3-220ENST00000505307 DRAP1Q14919 205 aaPredicted RBP20.53■□□□□ 0.88
UBE2D3-220ENST00000505307 MIIPQ5JXC2 388 aa20.53■□□□□ 0.88
UBE2D3-220ENST00000505307 MSANTD4Q8NCY6 345 aa20.53■□□□□ 0.88
UBE2D3-220ENST00000505307 NT5C3BQ969T7 300 aa20.53■□□□□ 0.88
UBE2D3-220ENST00000505307 FAM131CQ96AQ9 280 aa20.53■□□□□ 0.88
UBE2D3-220ENST00000505307 C18orf8Q96DM3 657 aa20.53■□□□□ 0.88
UBE2D3-220ENST00000505307 SLC6A18Q96N87 628 aa20.53■□□□□ 0.88
UBE2D3-220ENST00000505307 ARHGEF38Q9NXL2 777 aa20.53■□□□□ 0.88
UBE2D3-220ENST00000505307 VPS28Q9UK41 221 aa20.53■□□□□ 0.88
UBE2D3-220ENST00000505307 AKAP13Q12802 2813 aa20.52■□□□□ 0.88
UBE2D3-220ENST00000505307 A0A1B0GTQ1 180 aa20.52■□□□□ 0.88
UBE2D3-220ENST00000505307 CYP11B1P15538 503 aa20.52■□□□□ 0.88
UBE2D3-220ENST00000505307 KRT83P78385 493 aa20.52■□□□□ 0.88
UBE2D3-220ENST00000505307 CENPCQ03188 943 aa20.52■□□□□ 0.88
UBE2D3-220ENST00000505307 RAPGEF1Q13905 1077 aa20.52■□□□□ 0.88
UBE2D3-220ENST00000505307 KCNJ12Q14500 433 aa20.52■□□□□ 0.88
UBE2D3-220ENST00000505307 DPCR1Q3MIW9 517 aa20.52■□□□□ 0.88
UBE2D3-220ENST00000505307 ACCSLQ4AC99 568 aa20.52■□□□□ 0.88
UBE2D3-220ENST00000505307 KCNT1Q5JUK3 1230 aa20.52■□□□□ 0.88
UBE2D3-220ENST00000505307 KLHDC7AQ5VTJ3 777 aa20.52■□□□□ 0.88
UBE2D3-220ENST00000505307 DPY19L2P1Q6NXN4 242 aa20.52■□□□□ 0.88
UBE2D3-220ENST00000505307 LAYNQ6UX15 382 aa20.52■□□□□ 0.88
UBE2D3-220ENST00000505307 ELF4Q99607 663 aaPredicted RBP20.52■□□□□ 0.88
UBE2D3-220ENST00000505307 SIK2Q9H0K1 926 aa20.52■□□□□ 0.88
UBE2D3-220ENST00000505307 NUP62CLQ9H1M0 184 aa20.52■□□□□ 0.88
UBE2D3-220ENST00000505307 AASDHPPTQ9NRN7 309 aa20.52■□□□□ 0.88
UBE2D3-220ENST00000505307 PIGVQ9NUD9 493 aa20.52■□□□□ 0.88
UBE2D3-220ENST00000505307 OR51B4Q9Y5P0 310 aa20.52■□□□□ 0.88
UBE2D3-220ENST00000505307 TBC1D3DA0A087WVF3 549 aa20.51■□□□□ 0.87
UBE2D3-220ENST00000505307 TBC1D3IA0A087WXS9 549 aa20.51■□□□□ 0.87
UBE2D3-220ENST00000505307 TBC1D3EA0A087X179 549 aa20.51■□□□□ 0.87
UBE2D3-220ENST00000505307 TBC1D3KA0A087X1G2 549 aa20.51■□□□□ 0.87
UBE2D3-220ENST00000505307 TBC1D3FA6NER0 549 aaPredicted RBP20.51■□□□□ 0.87
UBE2D3-220ENST00000505307 TBC1D3LB9A6J9 549 aa20.51■□□□□ 0.87
UBE2D3-220ENST00000505307 C1QTNF3-AMACRE9PGA6 284 aa20.51■□□□□ 0.87
UBE2D3-220ENST00000505307 KCNK3O14649 394 aa20.51■□□□□ 0.87
UBE2D3-220ENST00000505307 MCF2LO15068 1137 aa20.51■□□□□ 0.87
UBE2D3-220ENST00000505307 LATO43561 262 aa20.51■□□□□ 0.87
UBE2D3-220ENST00000505307 LSM8O95777 96 aaKnown RBP20.51■□□□□ 0.87
UBE2D3-220ENST00000505307 TBC1D3HP0C7X1 549 aa20.51■□□□□ 0.87
UBE2D3-220ENST00000505307 PNMA6AP0CW24 399 aaPredicted RBP20.51■□□□□ 0.87
UBE2D3-220ENST00000505307 DLG2Q15700 870 aa20.51■□□□□ 0.87
UBE2D3-220ENST00000505307 SLC25A52Q3SY17 297 aa20.51■□□□□ 0.87
UBE2D3-220ENST00000505307 TBC1D3GQ6DHY5 549 aa20.51■□□□□ 0.87
UBE2D3-220ENST00000505307 TBC1D3CQ6IPX1 549 aa20.51■□□□□ 0.87
UBE2D3-220ENST00000505307 LRRC31Q6UY01 552 aa20.51■□□□□ 0.87
UBE2D3-220ENST00000505307 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.51■□□□□ 0.87
UBE2D3-220ENST00000505307 TMPRSS7Q7RTY8 843 aa20.51■□□□□ 0.87
UBE2D3-220ENST00000505307 PRPF39Q86UA1 669 aaKnown RBP20.51■□□□□ 0.87
UBE2D3-220ENST00000505307 ERICH1Q86X53 443 aa20.51■□□□□ 0.87
UBE2D3-220ENST00000505307 TBC1D3Q8IZP1 549 aaPredicted RBP20.51■□□□□ 0.87
UBE2D3-220ENST00000505307 SERAC1Q96JX3 654 aa20.51■□□□□ 0.87
UBE2D3-220ENST00000505307 C1orf74Q96LT6 269 aa20.51■□□□□ 0.87
UBE2D3-220ENST00000505307 CCDC114Q96M63 670 aa20.51■□□□□ 0.87
UBE2D3-220ENST00000505307 C2orf49Q9BVC5 232 aaPredicted RBP20.51■□□□□ 0.87
UBE2D3-220ENST00000505307 TKTL2Q9H0I9 626 aa20.51■□□□□ 0.87
UBE2D3-220ENST00000505307 MUC3BQ9H195 1237 aa20.51■□□□□ 0.87
UBE2D3-220ENST00000505307 EBF2Q9HAK2 575 aa20.51■□□□□ 0.87
UBE2D3-220ENST00000505307 PLCB1Q9NQ66 1216 aa20.51■□□□□ 0.87
UBE2D3-220ENST00000505307 GDF3Q9NR23 364 aa20.51■□□□□ 0.87
UBE2D3-220ENST00000505307 TOR4AQ9NXH8 423 aa20.51■□□□□ 0.87
UBE2D3-220ENST00000505307 PPM1HQ9ULR3 514 aa20.51■□□□□ 0.87
UBE2D3-220ENST00000505307 HS3ST2Q9Y278 367 aa20.51■□□□□ 0.87
UBE2D3-220ENST00000505307 BTBD3Q9Y2F9 522 aa20.51■□□□□ 0.87
UBE2D3-220ENST00000505307 FARP1Q9Y4F1 1045 aaPredicted RBP20.51■□□□□ 0.87
UBE2D3-220ENST00000505307 PES1O00541 588 aaKnown RBP20.5■□□□□ 0.87
UBE2D3-220ENST00000505307 ATXN1LP0C7T5 689 aaKnown RBP20.5■□□□□ 0.87
UBE2D3-220ENST00000505307 VAV1P15498 845 aa20.5■□□□□ 0.87
UBE2D3-220ENST00000505307 ZNF18P17022 549 aa20.5■□□□□ 0.87
UBE2D3-220ENST00000505307 EEF1GP26641 437 aaKnown RBP20.5■□□□□ 0.87
UBE2D3-220ENST00000505307 DRD3P35462 400 aa20.5■□□□□ 0.87
UBE2D3-220ENST00000505307 SULT1E1P49888 294 aa20.5■□□□□ 0.87
UBE2D3-220ENST00000505307 RNASE9P60153 205 aaKnown RBP20.5■□□□□ 0.87
UBE2D3-220ENST00000505307 DEUP1Q05D60 604 aa20.5■□□□□ 0.87
UBE2D3-220ENST00000505307 CCDC15Q0P6D6 951 aa20.5■□□□□ 0.87
UBE2D3-220ENST00000505307 KCNMA1Q12791 1236 aa20.5■□□□□ 0.87
UBE2D3-220ENST00000505307 C14orf80Q86SX3 495 aa20.5■□□□□ 0.87
UBE2D3-220ENST00000505307 SETD3Q86TU7 594 aaPredicted RBP20.5■□□□□ 0.87
UBE2D3-220ENST00000505307 GALNT15Q8N3T1 639 aa20.5■□□□□ 0.87
UBE2D3-220ENST00000505307 OXR1Q8N573 874 aa20.5■□□□□ 0.87
UBE2D3-220ENST00000505307 SH2D3CQ8N5H7 860 aa20.5■□□□□ 0.87
UBE2D3-220ENST00000505307 STK33Q9BYT3 514 aa20.5■□□□□ 0.87
UBE2D3-220ENST00000505307 DMTF1Q9Y222 760 aa20.5■□□□□ 0.87
UBE2D3-220ENST00000505307 FHOD1Q9Y613 1164 aa20.5■□□□□ 0.87
UBE2D3-220ENST00000505307 FAM208BQ5VWN6 2430 aa20.5■□□□□ 0.87
UBE2D3-220ENST00000505307 WDFY3Q8IZQ1 3526 aa20.5■□□□□ 0.87
UBE2D3-220ENST00000505307 A0A1W2PR77 199 aa20.49■□□□□ 0.87
UBE2D3-220ENST00000505307 DRGXA6NNA5 263 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms