RNA–Protein interactions for RNA: ENST00000503842.5

PRDM2-213, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-213ENST00000503842 SPHK2Q9NRA0 654 aa13.67□□□□□ -0.22
PRDM2-213ENST00000503842 DNPEPQ9ULA0 475 aa13.67□□□□□ -0.22
PRDM2-213ENST00000503842 TBC1D30Q9Y2I9 924 aa13.67□□□□□ -0.22
PRDM2-213ENST00000503842 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.66□□□□□ -0.22
PRDM2-213ENST00000503842 C2CD4DB7Z1M9 353 aa13.66□□□□□ -0.22
PRDM2-213ENST00000503842 MCF2LO15068 1137 aa13.66□□□□□ -0.22
PRDM2-213ENST00000503842 MAP3K6O95382 1288 aa13.66□□□□□ -0.22
PRDM2-213ENST00000503842 CYBBP04839 570 aa13.66□□□□□ -0.22
PRDM2-213ENST00000503842 CYP17A1P05093 508 aa13.66□□□□□ -0.22
PRDM2-213ENST00000503842 ARSAP15289 507 aa13.66□□□□□ -0.22
PRDM2-213ENST00000503842 PSMC3P17980 439 aa13.66□□□□□ -0.22
PRDM2-213ENST00000503842 MX2P20592 715 aa13.66□□□□□ -0.22
PRDM2-213ENST00000503842 OR1E1P30953 314 aa13.66□□□□□ -0.22
PRDM2-213ENST00000503842 ZNF177Q13360 481 aaPredicted RBP13.66□□□□□ -0.22
PRDM2-213ENST00000503842 SNX1Q13596 522 aa13.66□□□□□ -0.22
PRDM2-213ENST00000503842 BYSLQ13895 437 aaKnown RBP13.66□□□□□ -0.22
PRDM2-213ENST00000503842 PDK1Q15118 436 aa13.66□□□□□ -0.22
PRDM2-213ENST00000503842 DHCR24Q15392 516 aa13.66□□□□□ -0.22
PRDM2-213ENST00000503842 LY6G5CQ5SRR4 150 aa13.66□□□□□ -0.22
PRDM2-213ENST00000503842 C6orf118Q5T5N4 469 aa13.66□□□□□ -0.22
PRDM2-213ENST00000503842 TRIM68Q6AZZ1 485 aa13.66□□□□□ -0.22
PRDM2-213ENST00000503842 CXorf57Q6NSI4 855 aaKnown RBP13.66□□□□□ -0.22
PRDM2-213ENST00000503842 RHBDF2Q6PJF5 856 aa13.66□□□□□ -0.22
PRDM2-213ENST00000503842 SETD3Q86TU7 594 aaPredicted RBP13.66□□□□□ -0.22
PRDM2-213ENST00000503842 KLHL7Q8IXQ5 586 aa13.66□□□□□ -0.22
PRDM2-213ENST00000503842 NOA1Q8NC60 698 aaKnown RBP13.66□□□□□ -0.22
PRDM2-213ENST00000503842 DDI1Q8WTU0 396 aa13.66□□□□□ -0.22
PRDM2-213ENST00000503842 QKIQ96PU8 341 aaKnown RBP eCLIP13.66□□□□□ -0.221e-6■■■□□ 17.1
PRDM2-213ENST00000503842 KRT12Q99456 494 aa13.66□□□□□ -0.22
PRDM2-213ENST00000503842 RPP25Q9BUL9 199 aaKnown RBP13.66□□□□□ -0.22
PRDM2-213ENST00000503842 SLC39A8Q9C0K1 460 aa13.66□□□□□ -0.22
PRDM2-213ENST00000503842 HPS4Q9NQG7 708 aa13.66□□□□□ -0.22
PRDM2-213ENST00000503842 THG1LQ9NWX6 298 aaKnown RBP13.66□□□□□ -0.22
PRDM2-213ENST00000503842 PCYOX1Q9UHG3 505 aa13.66□□□□□ -0.22
PRDM2-213ENST00000503842 DRG1Q9Y295 367 aaKnown RBP13.66□□□□□ -0.22
PRDM2-213ENST00000503842 ILVBLA1L0T0 632 aa13.65□□□□□ -0.22
PRDM2-213ENST00000503842 HACD1B0YJ81 288 aa13.65□□□□□ -0.22
PRDM2-213ENST00000503842 RASA4BC9J798 803 aa13.65□□□□□ -0.22
PRDM2-213ENST00000503842 NCAM2O15394 837 aa13.65□□□□□ -0.22
PRDM2-213ENST00000503842 HOXC11O43248 304 aaPredicted RBP13.65□□□□□ -0.22
PRDM2-213ENST00000503842 RASA4O43374 803 aa13.65□□□□□ -0.22
PRDM2-213ENST00000503842 RAMP2O60895 175 aa13.65□□□□□ -0.22
PRDM2-213ENST00000503842 NFATC1O95644 943 aa13.65□□□□□ -0.22
PRDM2-213ENST00000503842 ITGAVP06756 1048 aa13.65□□□□□ -0.22
PRDM2-213ENST00000503842 RBP3P10745 1247 aa13.65□□□□□ -0.22
PRDM2-213ENST00000503842 SP100P23497 879 aaPredicted RBP13.65□□□□□ -0.22
PRDM2-213ENST00000503842 GARSP41250 739 aaKnown RBP13.65□□□□□ -0.22
PRDM2-213ENST00000503842 KCNJ1P48048 391 aa13.65□□□□□ -0.22
PRDM2-213ENST00000503842 YBEYP58557 167 aaPredicted RBP13.65□□□□□ -0.22
PRDM2-213ENST00000503842 PPIDQ08752 370 aaKnown RBP13.65□□□□□ -0.22
PRDM2-213ENST00000503842 PRKD1Q15139 912 aaPredicted RBP13.65□□□□□ -0.22
PRDM2-213ENST00000503842 PARP15Q460N3 678 aa13.65□□□□□ -0.22
PRDM2-213ENST00000503842 SLC45A4Q5BKX6 768 aa13.65□□□□□ -0.22
PRDM2-213ENST00000503842 CCDC137Q6PK04 289 aaKnown RBP13.65□□□□□ -0.22
PRDM2-213ENST00000503842 BLOC1S3Q6QNY0 202 aa13.65□□□□□ -0.22
PRDM2-213ENST00000503842 ZNF783Q6ZMS7 281 aa13.65□□□□□ -0.22
PRDM2-213ENST00000503842 ZC3H18Q86VM9 953 aaKnown RBP13.65□□□□□ -0.22
PRDM2-213ENST00000503842 LRRC49Q8IUZ0 686 aa13.65□□□□□ -0.22
PRDM2-213ENST00000503842 CCDC33Q8N5R6 958 aa13.65□□□□□ -0.22
PRDM2-213ENST00000503842 OR52K2Q8NGK3 314 aa13.65□□□□□ -0.22
PRDM2-213ENST00000503842 MAFAQ8NHW3 353 aaPredicted RBP13.65□□□□□ -0.22
PRDM2-213ENST00000503842 WFDC5Q8TCV5 224 aa13.65□□□□□ -0.22
PRDM2-213ENST00000503842 SLCO2A1Q92959 643 aa13.65□□□□□ -0.22
PRDM2-213ENST00000503842 ATP2A3Q93084 1043 aa13.65□□□□□ -0.22
PRDM2-213ENST00000503842 HDAC11Q96DB2 347 aa13.65□□□□□ -0.22
PRDM2-213ENST00000503842 HMCESQ96FZ2 354 aa13.65□□□□□ -0.22
PRDM2-213ENST00000503842 ZFYVE19Q96K21 471 aa13.65□□□□□ -0.22
PRDM2-213ENST00000503842 LMLNQ96KR4 655 aa13.65□□□□□ -0.22
PRDM2-213ENST00000503842 RUNDC3BQ96NL0 473 aa13.65□□□□□ -0.22
PRDM2-213ENST00000503842 BBS2Q9BXC9 721 aa13.65□□□□□ -0.22
PRDM2-213ENST00000503842 BRD8Q9H0E9 1235 aa13.65□□□□□ -0.22
PRDM2-213ENST00000503842 PLK2Q9NYY3 685 aa13.65□□□□□ -0.22
PRDM2-213ENST00000503842 CLEC4EQ9ULY5 219 aa13.65□□□□□ -0.22
PRDM2-213ENST00000503842 NUMBLQ9Y6R0 609 aa13.65□□□□□ -0.22
PRDM2-213ENST00000503842 BCLAF3A2AJT9 711 aaKnown RBP13.64□□□□□ -0.23
PRDM2-213ENST00000503842 ARHGAP42A6NI28 874 aa13.64□□□□□ -0.23
PRDM2-213ENST00000503842 H7C0C1 242 aa13.64□□□□□ -0.23
PRDM2-213ENST00000503842 PPP1R12AO14974 1030 aaPredicted RBP13.64□□□□□ -0.23
PRDM2-213ENST00000503842 CHADO15335 359 aa13.64□□□□□ -0.23
PRDM2-213ENST00000503842 ADH1CP00326 375 aa13.64□□□□□ -0.23
PRDM2-213ENST00000503842 RHOCP08134 193 aa13.64□□□□□ -0.23
PRDM2-213ENST00000503842 TYRP14679 529 aa13.64□□□□□ -0.23
PRDM2-213ENST00000503842 VAV1P15498 845 aa13.64□□□□□ -0.23
PRDM2-213ENST00000503842 PTGIRP43119 386 aa13.64□□□□□ -0.23
PRDM2-213ENST00000503842 ATP5OP48047 213 aa13.64□□□□□ -0.23
PRDM2-213ENST00000503842 PAPOLAP51003 745 aaKnown RBP13.64□□□□□ -0.23
PRDM2-213ENST00000503842 GNA12Q03113 381 aa13.64□□□□□ -0.23
PRDM2-213ENST00000503842 ZNF33AQ06730 810 aa13.64□□□□□ -0.23
PRDM2-213ENST00000503842 CDH18Q13634 790 aa13.64□□□□□ -0.23
PRDM2-213ENST00000503842 GRM2Q14416 872 aa13.64□□□□□ -0.23
PRDM2-213ENST00000503842 POLD3Q15054 466 aaPredicted RBP13.64□□□□□ -0.23
PRDM2-213ENST00000503842 GAB4Q2WGN9 574 aa13.64□□□□□ -0.23
PRDM2-213ENST00000503842 FSCBQ5H9T9 825 aa13.64□□□□□ -0.23
PRDM2-213ENST00000503842 PTCRAQ6ISU1 281 aaPredicted RBP13.64□□□□□ -0.23
PRDM2-213ENST00000503842 CDKL3Q8IVW4 592 aaPredicted RBP13.64□□□□□ -0.23
PRDM2-213ENST00000503842 MFN1Q8IWA4 741 aa13.64□□□□□ -0.23
PRDM2-213ENST00000503842 YAF2Q8IY57 180 aa13.64□□□□□ -0.23
PRDM2-213ENST00000503842 CARNMT1Q8N4J0 409 aa13.64□□□□□ -0.23
PRDM2-213ENST00000503842 ATPAF2Q8N5M1 289 aa13.64□□□□□ -0.23
PRDM2-213ENST00000503842 ATL2Q8NHH9 583 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms