RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 CA9Q16790 459 aa14.03□□□□□ -0.16
NPHP4-207ENST00000470763 PCDH19Q8TAB3 1148 aa14.03□□□□□ -0.16
NPHP4-207ENST00000470763 SYTL5Q8TDW5 730 aaPredicted RBP14.03□□□□□ -0.16
NPHP4-207ENST00000470763 CLEC4DQ8WXI8 215 aa14.03□□□□□ -0.16
NPHP4-207ENST00000470763 HNRNPABQ99729 332 aaKnown RBP14.03□□□□□ -0.16
NPHP4-207ENST00000470763 NAA50Q9GZZ1 169 aaKnown RBP14.03□□□□□ -0.16
NPHP4-207ENST00000470763 VPS33BQ9H267 617 aa14.03□□□□□ -0.16
NPHP4-207ENST00000470763 CAB39LQ9H9S4 337 aa14.03□□□□□ -0.16
NPHP4-207ENST00000470763 SNX15Q9NRS6 342 aa14.03□□□□□ -0.16
NPHP4-207ENST00000470763 ASNSD1Q9NWL6 643 aa14.03□□□□□ -0.16
NPHP4-207ENST00000470763 HTRA2O43464 458 aaPredicted RBP14.03□□□□□ -0.16
NPHP4-207ENST00000470763 GSTT2P0CG29 244 aa14.03□□□□□ -0.16
NPHP4-207ENST00000470763 GSTT2BP0CG30 244 aa14.03□□□□□ -0.16
NPHP4-207ENST00000470763 MGAT1P26572 445 aa14.03□□□□□ -0.16
NPHP4-207ENST00000470763 GABRB3P28472 473 aa14.03□□□□□ -0.16
NPHP4-207ENST00000470763 TFAMQ00059 246 aaKnown RBP14.03□□□□□ -0.16
NPHP4-207ENST00000470763 PRKCEQ02156 737 aa14.03□□□□□ -0.16
NPHP4-207ENST00000470763 TRPC3Q13507 836 aa14.03□□□□□ -0.16
NPHP4-207ENST00000470763 METTL21CQ5VZV1 264 aa14.03□□□□□ -0.16
NPHP4-207ENST00000470763 RSBN1LQ6PCB5 846 aaPredicted RBP14.03□□□□□ -0.16
NPHP4-207ENST00000470763 KCNT2Q6UVM3 1135 aa14.03□□□□□ -0.16
NPHP4-207ENST00000470763 NETO2Q8NC67 525 aa14.03□□□□□ -0.16
NPHP4-207ENST00000470763 FAM110BQ8TC76 370 aa14.03□□□□□ -0.16
NPHP4-207ENST00000470763 RTP4Q96DX8 246 aa14.03□□□□□ -0.16
NPHP4-207ENST00000470763 CNOT11Q9UKZ1 510 aaKnown RBP14.03□□□□□ -0.16
NPHP4-207ENST00000470763 IQCA1LA6NCM1 817 aa14.02□□□□□ -0.16
NPHP4-207ENST00000470763 GPR25O00155 361 aa14.02□□□□□ -0.16
NPHP4-207ENST00000470763 ENDOD1O94919 500 aa14.02□□□□□ -0.16
NPHP4-207ENST00000470763 MCF2P10911 925 aa14.02□□□□□ -0.16
NPHP4-207ENST00000470763 PDGFRAP16234 1089 aa14.02□□□□□ -0.16
NPHP4-207ENST00000470763 PGGT1BP53609 377 aa14.02□□□□□ -0.16
NPHP4-207ENST00000470763 RPS6P62753 249 aaKnown RBP14.02□□□□□ -0.16
NPHP4-207ENST00000470763 ZNF829Q3KNS6 432 aaPredicted RBP14.02□□□□□ -0.16
NPHP4-207ENST00000470763 AARS2Q5JTZ9 985 aaKnown RBP14.02□□□□□ -0.16
NPHP4-207ENST00000470763 HERC6Q8IVU3 1022 aa14.02□□□□□ -0.16
NPHP4-207ENST00000470763 DEPTORQ8TB45 409 aa14.02□□□□□ -0.16
NPHP4-207ENST00000470763 TBC1D15Q8TC07 691 aa14.02□□□□□ -0.16
NPHP4-207ENST00000470763 RXFP2Q8WXD0 754 aa14.02□□□□□ -0.16
NPHP4-207ENST00000470763 TCHPQ9BT92 498 aa14.02□□□□□ -0.16
NPHP4-207ENST00000470763 GATA5Q9BWX5 397 aaPredicted RBP14.02□□□□□ -0.16
NPHP4-207ENST00000470763 HIPK3Q9H422 1215 aa14.02□□□□□ -0.16
NPHP4-207ENST00000470763 RAVER2Q9HCJ3 691 aaKnown RBP14.02□□□□□ -0.16
NPHP4-207ENST00000470763 NGRNQ9NPE2 291 aaKnown RBP14.02□□□□□ -0.16
NPHP4-207ENST00000470763 VPS45Q9NRW7 570 aa14.02□□□□□ -0.16
NPHP4-207ENST00000470763 H3BMQ9 156 aa14.02□□□□□ -0.17
NPHP4-207ENST00000470763 BMP10O95393 424 aa14.02□□□□□ -0.17
NPHP4-207ENST00000470763 CCDC130P13994 396 aa14.02□□□□□ -0.17
NPHP4-207ENST00000470763 MAGEA6P43360 314 aa14.02□□□□□ -0.17
NPHP4-207ENST00000470763 NUMBP49757 651 aa14.02□□□□□ -0.17
NPHP4-207ENST00000470763 EIF2B2P49770 351 aaKnown RBP14.02□□□□□ -0.17
NPHP4-207ENST00000470763 TUBA4AP68366 448 aa14.02□□□□□ -0.17
NPHP4-207ENST00000470763 GBE1Q04446 702 aa14.02□□□□□ -0.17
NPHP4-207ENST00000470763 DPYSQ14117 519 aa14.02□□□□□ -0.17
NPHP4-207ENST00000470763 ZNF699Q32M78 642 aa14.02□□□□□ -0.17
NPHP4-207ENST00000470763 ZBED5Q49AG3 693 aa14.02□□□□□ -0.17
NPHP4-207ENST00000470763 TMEM26Q6ZUK4 368 aa14.02□□□□□ -0.17
NPHP4-207ENST00000470763 LYSMD3Q7Z3D4 306 aa14.02□□□□□ -0.17
NPHP4-207ENST00000470763 SETD3Q86TU7 594 aaPredicted RBP14.02□□□□□ -0.17
NPHP4-207ENST00000470763 CCDC60Q8IWA6 550 aaPredicted RBP14.02□□□□□ -0.17
NPHP4-207ENST00000470763 NIM1KQ8IY84 436 aa14.02□□□□□ -0.17
NPHP4-207ENST00000470763 DCLK2Q8N568 766 aa14.02□□□□□ -0.17
NPHP4-207ENST00000470763 SLC4A11Q8NBS3 891 aa14.02□□□□□ -0.17
NPHP4-207ENST00000470763 COG8Q96MW5 612 aa14.02□□□□□ -0.17
NPHP4-207ENST00000470763 HEPHQ9BQS7 1158 aa14.02□□□□□ -0.17
NPHP4-207ENST00000470763 CEP41Q9BYV8 373 aa14.02□□□□□ -0.17
NPHP4-207ENST00000470763 EFCAB1Q9HAE3 211 aa14.02□□□□□ -0.17
NPHP4-207ENST00000470763 CXorf21Q9HAI6 301 aa14.02□□□□□ -0.17
NPHP4-207ENST00000470763 PDLIM7Q9NR12 457 aa14.02□□□□□ -0.17
NPHP4-207ENST00000470763 MTMR10Q9NXD2 777 aa14.02□□□□□ -0.17
NPHP4-207ENST00000470763 SPATA7Q9P0W8 599 aa14.02□□□□□ -0.17
NPHP4-207ENST00000470763 VPS28Q9UK41 221 aa14.02□□□□□ -0.17
NPHP4-207ENST00000470763 SLC8A2Q9UPR5 921 aa14.02□□□□□ -0.17
NPHP4-207ENST00000470763 GJA3Q9Y6H8 435 aa14.02□□□□□ -0.17
NPHP4-207ENST00000470763 STYXL1Q9Y6J8 313 aa14.02□□□□□ -0.17
NPHP4-207ENST00000470763 TCP10L2B9ZVM9 353 aa14.02□□□□□ -0.17
NPHP4-207ENST00000470763 G3V2L1 256 aa14.02□□□□□ -0.17
NPHP4-207ENST00000470763 SOCS2O14508 198 aa14.02□□□□□ -0.17
NPHP4-207ENST00000470763 STBD1O95210 358 aa14.02□□□□□ -0.17
NPHP4-207ENST00000470763 ICAM1P05362 532 aa14.02□□□□□ -0.17
NPHP4-207ENST00000470763 EPHX2P34913 555 aa14.02□□□□□ -0.17
NPHP4-207ENST00000470763 ACADVLP49748 655 aa14.02□□□□□ -0.17
NPHP4-207ENST00000470763 KPNA1P52294 538 aaPredicted RBP14.02□□□□□ -0.17
NPHP4-207ENST00000470763 SEL1L3Q68CR1 1132 aa14.02□□□□□ -0.17
NPHP4-207ENST00000470763 TTC33Q6PID6 262 aaPredicted RBP14.02□□□□□ -0.17
NPHP4-207ENST00000470763 ZBTB49Q6ZSB9 765 aa14.02□□□□□ -0.17
NPHP4-207ENST00000470763 CNDP1Q96KN2 507 aa14.02□□□□□ -0.17
NPHP4-207ENST00000470763 RMDN3Q96TC7 470 aa14.02□□□□□ -0.17
NPHP4-207ENST00000470763 MAGEB5Q9BZ81 275 aa14.02□□□□□ -0.17
NPHP4-207ENST00000470763 RPF2Q9H7B2 306 aaKnown RBP14.02□□□□□ -0.17
NPHP4-207ENST00000470763 HMGXB4Q9UGU5 601 aa14.02□□□□□ -0.17
NPHP4-207ENST00000470763 TSC22D4Q9Y3Q8 395 aa14.02□□□□□ -0.17
NPHP4-207ENST00000470763 PTPRFP10586 1907 aa14.01□□□□□ -0.17
NPHP4-207ENST00000470763 BCLAF3A2AJT9 711 aaKnown RBP14.01□□□□□ -0.17
NPHP4-207ENST00000470763 SAC3D1A6NKF1 404 aa14.01□□□□□ -0.17
NPHP4-207ENST00000470763 YDJCA8MPS7 323 aa14.01□□□□□ -0.17
NPHP4-207ENST00000470763 WDR46O15213 610 aaKnown RBP14.01□□□□□ -0.17
NPHP4-207ENST00000470763 TIPRLO75663 272 aa14.01□□□□□ -0.17
NPHP4-207ENST00000470763 CLIC3O95833 236 aa14.01□□□□□ -0.17
NPHP4-207ENST00000470763 CDH3P22223 829 aa14.01□□□□□ -0.17
NPHP4-207ENST00000470763 ASPAP45381 313 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms