RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 SERPIND1P05546 499 aa14.03□□□□□ -0.16
BRAT1-203ENST00000467558 CD86P42081 329 aa14.03□□□□□ -0.16
BRAT1-203ENST00000467558 PPP3CCP48454 512 aa14.03□□□□□ -0.16
BRAT1-203ENST00000467558 POLE2P56282 527 aa14.03□□□□□ -0.16
BRAT1-203ENST00000467558 LRRC36Q1X8D7 754 aa14.03□□□□□ -0.16
BRAT1-203ENST00000467558 TMEM259Q4ZIN3 620 aa14.03□□□□□ -0.16
BRAT1-203ENST00000467558 CACHD1Q5VU97 1274 aa14.03□□□□□ -0.16
BRAT1-203ENST00000467558 SLC39A4Q6P5W5 647 aa14.03□□□□□ -0.16
BRAT1-203ENST00000467558 FAM9CQ8IZT9 166 aa14.03□□□□□ -0.16
BRAT1-203ENST00000467558 RFWD2Q8NHY2 731 aa14.03□□□□□ -0.16
BRAT1-203ENST00000467558 IL1RL2Q9HB29 575 aa14.03□□□□□ -0.16
BRAT1-203ENST00000467558 SFMBT1Q9UHJ3 866 aa14.03□□□□□ -0.16
BRAT1-203ENST00000467558 ADAM28Q9UKQ2 775 aa14.03□□□□□ -0.16
BRAT1-203ENST00000467558 FAM95CA0A1B0GW59 222 aa14.03□□□□□ -0.16
BRAT1-203ENST00000467558 ARL5CA6NH57 179 aa14.03□□□□□ -0.16
BRAT1-203ENST00000467558 MOXD2PA6NHM9 499 aa14.03□□□□□ -0.16
BRAT1-203ENST00000467558 OR1D2P34982 312 aa14.03□□□□□ -0.16
BRAT1-203ENST00000467558 CRHR2Q13324 411 aa14.03□□□□□ -0.16
BRAT1-203ENST00000467558 CYLC2Q14093 348 aaPredicted RBP14.03□□□□□ -0.16
BRAT1-203ENST00000467558 PTK2BQ14289 1009 aa14.03□□□□□ -0.16
BRAT1-203ENST00000467558 CDCA2Q69YH5 1023 aaPredicted RBP14.03□□□□□ -0.16
BRAT1-203ENST00000467558 C16orf59Q7L2K0 433 aa14.03□□□□□ -0.16
BRAT1-203ENST00000467558 DPF3Q92784 378 aa14.03□□□□□ -0.16
BRAT1-203ENST00000467558 RBBP8Q99708 897 aa14.03□□□□□ -0.16
BRAT1-203ENST00000467558 MINDY3Q9H8M7 445 aa14.03□□□□□ -0.16
BRAT1-203ENST00000467558 TCRBV9S1A1TA0A576 114 aa14.03□□□□□ -0.16
BRAT1-203ENST00000467558 NT5C1B-RDH14C9J2C7 533 aa14.03□□□□□ -0.16
BRAT1-203ENST00000467558 GBE1Q04446 702 aa14.03□□□□□ -0.16
BRAT1-203ENST00000467558 LRRC8DQ7L1W4 858 aa14.03□□□□□ -0.16
BRAT1-203ENST00000467558 NMRK1Q9NWW6 199 aa14.03□□□□□ -0.16
BRAT1-203ENST00000467558 FCHO1O14526 889 aa14.02□□□□□ -0.16
BRAT1-203ENST00000467558 PAGE1O75459 146 aa14.02□□□□□ -0.16
BRAT1-203ENST00000467558 HSPA1AP0DMV8 641 aaKnown RBP14.02□□□□□ -0.16
BRAT1-203ENST00000467558 HSPA1BP0DMV9 641 aaKnown RBP14.02□□□□□ -0.16
BRAT1-203ENST00000467558 WARSP23381 471 aaKnown RBP14.02□□□□□ -0.16
BRAT1-203ENST00000467558 POLR2LP62875 67 aaKnown RBP14.02□□□□□ -0.16
BRAT1-203ENST00000467558 TTC27Q6P3X3 843 aa14.02□□□□□ -0.16
BRAT1-203ENST00000467558 SCUBE1Q8IWY4 988 aa14.02□□□□□ -0.16
BRAT1-203ENST00000467558 MRPL46Q9H2W6 279 aaKnown RBP14.02□□□□□ -0.16
BRAT1-203ENST00000467558 KIF17Q9P2E2 1029 aa14.02□□□□□ -0.16
BRAT1-203ENST00000467558 SNX5Q9Y5X3 404 aa14.02□□□□□ -0.16
BRAT1-203ENST00000467558 ATP5BP06576 529 aaKnown RBP14.02□□□□□ -0.16
BRAT1-203ENST00000467558 SERPINA4P29622 427 aa14.02□□□□□ -0.16
BRAT1-203ENST00000467558 PRKCZQ05513 592 aa14.02□□□□□ -0.16
BRAT1-203ENST00000467558 SFSWAPQ12872 951 aaKnown RBP14.02□□□□□ -0.16
BRAT1-203ENST00000467558 GRB14Q14449 540 aa14.02□□□□□ -0.16
BRAT1-203ENST00000467558 ZNF792Q3KQV3 632 aa14.02□□□□□ -0.16
BRAT1-203ENST00000467558 POTEHQ6S545 545 aa14.02□□□□□ -0.16
BRAT1-203ENST00000467558 OTOAQ7RTW8 1153 aa14.02□□□□□ -0.16
BRAT1-203ENST00000467558 TMEM192Q8IY95 271 aa14.02□□□□□ -0.16
BRAT1-203ENST00000467558 FBXO39Q8N4B4 442 aa14.02□□□□□ -0.16
BRAT1-203ENST00000467558 DNAJC9Q8WXX5 260 aa14.02□□□□□ -0.16
BRAT1-203ENST00000467558 SEMA3CQ99985 751 aa14.02□□□□□ -0.16
BRAT1-203ENST00000467558 UNKQ9C0B0 810 aaKnown RBP14.02□□□□□ -0.16
BRAT1-203ENST00000467558 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.02□□□□□ -0.16
BRAT1-203ENST00000467558 CCDC88AQ3V6T2 1871 aa14.02□□□□□ -0.17
BRAT1-203ENST00000467558 BCLAF3A2AJT9 711 aaKnown RBP14.02□□□□□ -0.17
BRAT1-203ENST00000467558 RASSF10A6NK89 507 aa14.02□□□□□ -0.17
BRAT1-203ENST00000467558 TPP1O14773 563 aa14.02□□□□□ -0.17
BRAT1-203ENST00000467558 PHGDHO43175 533 aaKnown RBP14.02□□□□□ -0.17
BRAT1-203ENST00000467558 SNX3O60493 162 aa14.02□□□□□ -0.17
BRAT1-203ENST00000467558 MGEA5O60502 916 aa14.02□□□□□ -0.17
BRAT1-203ENST00000467558 BANF1O75531 89 aa14.02□□□□□ -0.17
BRAT1-203ENST00000467558 HNRNPH1P31943 449 aaKnown RBP14.02□□□□□ -0.17
BRAT1-203ENST00000467558 GPD2P43304 727 aa14.02□□□□□ -0.17
BRAT1-203ENST00000467558 MAPK8P45983 427 aa14.02□□□□□ -0.17
BRAT1-203ENST00000467558 ATXN3P54252 364 aaPredicted RBP14.02□□□□□ -0.17
BRAT1-203ENST00000467558 CCL14Q16627 93 aa14.02□□□□□ -0.17
BRAT1-203ENST00000467558 ANKS6Q68DC2 871 aa14.02□□□□□ -0.17
BRAT1-203ENST00000467558 UBR2Q8IWV8 1755 aa14.02□□□□□ -0.17
BRAT1-203ENST00000467558 CLUHO75153 1309 aa14.02□□□□□ -0.17
BRAT1-203ENST00000467558 UBDO15205 165 aa14.01□□□□□ -0.17
BRAT1-203ENST00000467558 PAPSS1O43252 624 aaPredicted RBP14.01□□□□□ -0.17
BRAT1-203ENST00000467558 DUSP4Q13115 394 aa14.01□□□□□ -0.17
BRAT1-203ENST00000467558 TMCO4Q5TGY1 634 aa14.01□□□□□ -0.17
BRAT1-203ENST00000467558 DENND1CQ8IV53 801 aa14.01□□□□□ -0.17
BRAT1-203ENST00000467558 STK40Q8N2I9 435 aa14.01□□□□□ -0.17
BRAT1-203ENST00000467558 FIBCD1Q8N539 461 aa14.01□□□□□ -0.17
BRAT1-203ENST00000467558 ATAD1Q8NBU5 361 aa14.01□□□□□ -0.17
BRAT1-203ENST00000467558 PCED1BQ96HM7 432 aa14.01□□□□□ -0.17
BRAT1-203ENST00000467558 LRRC4CQ9HCJ2 640 aa14.01□□□□□ -0.17
BRAT1-203ENST00000467558 STYXL1Q9Y6J8 313 aa14.01□□□□□ -0.17
BRAT1-203ENST00000467558 MYH3P11055 1940 aa14.01□□□□□ -0.17
BRAT1-203ENST00000467558 DNAJC8O75937 253 aaPredicted RBP14.01□□□□□ -0.17
BRAT1-203ENST00000467558 ADH1AP07327 375 aa14.01□□□□□ -0.17
BRAT1-203ENST00000467558 MLNP12872 115 aa14.01□□□□□ -0.17
BRAT1-203ENST00000467558 SMAD3P84022 425 aaKnown RBP14.01□□□□□ -0.17
BRAT1-203ENST00000467558 TAF10Q12962 218 aa14.01□□□□□ -0.17
BRAT1-203ENST00000467558 TRABD2AQ86V40 505 aa14.01□□□□□ -0.17
BRAT1-203ENST00000467558 LRRN4Q8WUT4 740 aa14.01□□□□□ -0.17
BRAT1-203ENST00000467558 PRCCQ92733 491 aaPredicted RBP14.01□□□□□ -0.17
BRAT1-203ENST00000467558 OXNAD1Q96HP4 312 aaPredicted RBP14.01□□□□□ -0.17
BRAT1-203ENST00000467558 BTN2A3PQ96KV6 586 aa14.01□□□□□ -0.17
BRAT1-203ENST00000467558 ECSITQ9BQ95 431 aa14.01□□□□□ -0.17
BRAT1-203ENST00000467558 DPEP3Q9H4B8 488 aa14.01□□□□□ -0.17
BRAT1-203ENST00000467558 THG1LQ9NWX6 298 aaKnown RBP14.01□□□□□ -0.17
BRAT1-203ENST00000467558 STARD13Q9Y3M8 1113 aa14.01□□□□□ -0.17
BRAT1-203ENST00000467558 SLC4A7Q9Y6M7 1214 aa14.01□□□□□ -0.17
BRAT1-203ENST00000467558 IRS2Q9Y4H2 1338 aa14.01□□□□□ -0.17
BRAT1-203ENST00000467558 A0A087X1B8 175 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms