RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 ADH1BP00325 375 aa10.45□□□□□ -0.74
SF3A3-204ENST00000462258 CALB1P05937 261 aa10.45□□□□□ -0.74
SF3A3-204ENST00000462258 VAV1P15498 845 aa10.45□□□□□ -0.74
SF3A3-204ENST00000462258 FERP16591 822 aa10.45□□□□□ -0.74
SF3A3-204ENST00000462258 ZNF165P49910 485 aa10.45□□□□□ -0.74
SF3A3-204ENST00000462258 ZNF252P-AS1Q0IIN9 211 aa10.45□□□□□ -0.74
SF3A3-204ENST00000462258 SFSWAPQ12872 951 aaKnown RBP10.45□□□□□ -0.74
SF3A3-204ENST00000462258 PTP4A2Q12974 167 aa10.45□□□□□ -0.74
SF3A3-204ENST00000462258 C15orf59Q2T9L4 293 aaPredicted RBP10.45□□□□□ -0.74
SF3A3-204ENST00000462258 FILIP1LQ4L180 1135 aa10.45□□□□□ -0.74
SF3A3-204ENST00000462258 C6orf118Q5T5N4 469 aa10.45□□□□□ -0.74
SF3A3-204ENST00000462258 SH3PXD2AQ5TCZ1 1133 aa10.45□□□□□ -0.74
SF3A3-204ENST00000462258 LRSAM1Q6UWE0 723 aa10.45□□□□□ -0.74
SF3A3-204ENST00000462258 MON1BQ7L1V2 547 aa10.45□□□□□ -0.74
SF3A3-204ENST00000462258 TFAP2DQ7Z6R9 452 aa10.45□□□□□ -0.74
SF3A3-204ENST00000462258 PHF13Q86YI8 300 aaPredicted RBP10.45□□□□□ -0.74
SF3A3-204ENST00000462258 STK40Q8N2I9 435 aa10.45□□□□□ -0.74
SF3A3-204ENST00000462258 DCAF4L2Q8NA75 395 aa10.45□□□□□ -0.74
SF3A3-204ENST00000462258 DEFB124Q8NES8 71 aa10.45□□□□□ -0.74
SF3A3-204ENST00000462258 OR2I1PQ8NGU4 316 aa10.45□□□□□ -0.74
SF3A3-204ENST00000462258 JOSD2Q8TAC2 188 aa10.45□□□□□ -0.74
SF3A3-204ENST00000462258 RXFP2Q8WXD0 754 aa10.45□□□□□ -0.74
SF3A3-204ENST00000462258 PTPRN2Q92932 1015 aa10.45□□□□□ -0.74
SF3A3-204ENST00000462258 ALG14Q96F25 216 aa10.45□□□□□ -0.74
SF3A3-204ENST00000462258 C1orf74Q96LT6 269 aa10.45□□□□□ -0.74
SF3A3-204ENST00000462258 FEM1AQ9BSK4 669 aa10.45□□□□□ -0.74
SF3A3-204ENST00000462258 FUCA2Q9BTY2 467 aa10.45□□□□□ -0.74
SF3A3-204ENST00000462258 C2orf49Q9BVC5 232 aaPredicted RBP10.45□□□□□ -0.74
SF3A3-204ENST00000462258 FBXL12Q9NXK8 326 aa10.45□□□□□ -0.74
SF3A3-204ENST00000462258 ADAM22Q9P0K1 906 aa10.45□□□□□ -0.74
SF3A3-204ENST00000462258 EIF2B4Q9UI10 523 aaKnown RBP10.45□□□□□ -0.74
SF3A3-204ENST00000462258 FZD4Q9ULV1 537 aa10.45□□□□□ -0.74
SF3A3-204ENST00000462258 NCKAP1Q9Y2A7 1128 aa10.45□□□□□ -0.74
SF3A3-204ENST00000462258 OR51B4Q9Y5P0 310 aa10.45□□□□□ -0.74
SF3A3-204ENST00000462258 IGLV3-10A0A075B6K4 115 aa10.44□□□□□ -0.74
SF3A3-204ENST00000462258 SYCE3A1L190 88 aa10.44□□□□□ -0.74
SF3A3-204ENST00000462258 DRGXA6NNA5 263 aa10.44□□□□□ -0.74
SF3A3-204ENST00000462258 GIPC1O14908 333 aa10.44□□□□□ -0.74
SF3A3-204ENST00000462258 TEX33O43247 280 aa10.44□□□□□ -0.74
SF3A3-204ENST00000462258 ATP9BO43861 1147 aa10.44□□□□□ -0.74
SF3A3-204ENST00000462258 SRGAP2O75044 1071 aa10.44□□□□□ -0.74
SF3A3-204ENST00000462258 ENDOD1O94919 500 aa10.44□□□□□ -0.74
SF3A3-204ENST00000462258 FSBPO95073 299 aa10.44□□□□□ -0.74
SF3A3-204ENST00000462258 IL1BP01584 269 aa10.44□□□□□ -0.74
SF3A3-204ENST00000462258 CCDC172P0C7W6 258 aa10.44□□□□□ -0.74
SF3A3-204ENST00000462258 CSRP1P21291 193 aaKnown RBP10.44□□□□□ -0.74
SF3A3-204ENST00000462258 PTPN9P43378 593 aa10.44□□□□□ -0.74
SF3A3-204ENST00000462258 VASPP50552 380 aaPredicted RBP10.44□□□□□ -0.74
SF3A3-204ENST00000462258 KLHL40Q2TBA0 621 aa10.44□□□□□ -0.74
SF3A3-204ENST00000462258 ARL13BQ3SXY8 428 aa10.44□□□□□ -0.74
SF3A3-204ENST00000462258 CCDC14Q49A88 953 aa10.44□□□□□ -0.74
SF3A3-204ENST00000462258 ACCSLQ4AC99 568 aa10.44□□□□□ -0.74
SF3A3-204ENST00000462258 RAB6CQ53S08 254 aa10.44□□□□□ -0.74
SF3A3-204ENST00000462258 N4BP2L1Q5TBK1 243 aaPredicted RBP10.44□□□□□ -0.74
SF3A3-204ENST00000462258 DNAJC24Q6P3W2 148 aa10.44□□□□□ -0.74
SF3A3-204ENST00000462258 Q6ZVU0 165 aa10.44□□□□□ -0.74
SF3A3-204ENST00000462258 STRADAQ7RTN6 431 aa10.44□□□□□ -0.74
SF3A3-204ENST00000462258 SETD3Q86TU7 594 aaPredicted RBP10.44□□□□□ -0.74
SF3A3-204ENST00000462258 SH2D3CQ8N5H7 860 aa10.44□□□□□ -0.74
SF3A3-204ENST00000462258 AADATQ8N5Z0 425 aa10.44□□□□□ -0.74
SF3A3-204ENST00000462258 C3orf20Q8ND61 904 aa10.44□□□□□ -0.74
SF3A3-204ENST00000462258 FRS2Q8WU20 508 aa10.44□□□□□ -0.74
SF3A3-204ENST00000462258 FAM172AQ8WUF8 416 aa10.44□□□□□ -0.74
SF3A3-204ENST00000462258 OR8D1Q8WZ84 308 aa10.44□□□□□ -0.74
SF3A3-204ENST00000462258 BIRC7Q96CA5 298 aa10.44□□□□□ -0.74
SF3A3-204ENST00000462258 HAPLN3Q96S86 360 aa10.44□□□□□ -0.74
SF3A3-204ENST00000462258 FAM129BQ96TA1 746 aa10.44□□□□□ -0.74
SF3A3-204ENST00000462258 PSMB7Q99436 277 aa10.44□□□□□ -0.74
SF3A3-204ENST00000462258 AGPAT1Q99943 283 aa10.44□□□□□ -0.74
SF3A3-204ENST00000462258 OMDQ99983 421 aa10.44□□□□□ -0.74
SF3A3-204ENST00000462258 SELENOOQ9BVL4 669 aa10.44□□□□□ -0.74
SF3A3-204ENST00000462258 ZDHHC5Q9C0B5 715 aa10.44□□□□□ -0.74
SF3A3-204ENST00000462258 ZYG11BQ9C0D3 744 aa10.44□□□□□ -0.74
SF3A3-204ENST00000462258 RAB6CQ9H0N0 254 aa10.44□□□□□ -0.74
SF3A3-204ENST00000462258 RTN4Q9NQC3 1192 aaKnown RBP10.44□□□□□ -0.74
SF3A3-204ENST00000462258 DNAAF2Q9NVR5 837 aaKnown RBP10.44□□□□□ -0.74
SF3A3-204ENST00000462258 MPP6Q9NZW5 540 aa10.44□□□□□ -0.74
SF3A3-204ENST00000462258 ADAMTS1Q9UHI8 967 aa10.44□□□□□ -0.74
SF3A3-204ENST00000462258 VPS51Q9UID3 782 aa10.44□□□□□ -0.74
SF3A3-204ENST00000462258 HS3ST2Q9Y278 367 aa10.44□□□□□ -0.74
SF3A3-204ENST00000462258 SLCO1B1Q9Y6L6 691 aa10.44□□□□□ -0.74
SF3A3-204ENST00000462258 A0A0D9SEW6 157 aa10.43□□□□□ -0.74
SF3A3-204ENST00000462258 A0A1B0GTH6 734 aa10.43□□□□□ -0.74
SF3A3-204ENST00000462258 FAM47DPA6NHR8 397 aa10.43□□□□□ -0.74
SF3A3-204ENST00000462258 LRRC72A6NJI9 287 aa10.43□□□□□ -0.74
SF3A3-204ENST00000462258 LRRC53A6NM62 1247 aa10.43□□□□□ -0.74
SF3A3-204ENST00000462258 SNAP91O60641 907 aa10.43□□□□□ -0.74
SF3A3-204ENST00000462258 CER1O95813 267 aa10.43□□□□□ -0.74
SF3A3-204ENST00000462258 IGHV4-34P06331 123 aa10.43□□□□□ -0.74
SF3A3-204ENST00000462258 KRT3P12035 628 aa10.43□□□□□ -0.74
SF3A3-204ENST00000462258 SRCP12931 536 aa10.43□□□□□ -0.74
SF3A3-204ENST00000462258 CEACAM1P13688 526 aa10.43□□□□□ -0.74
SF3A3-204ENST00000462258 GPD1P21695 349 aa10.43□□□□□ -0.74
SF3A3-204ENST00000462258 C5AR1P21730 350 aa10.43□□□□□ -0.74
SF3A3-204ENST00000462258 PMLP29590 882 aa10.43□□□□□ -0.74
SF3A3-204ENST00000462258 OR1E1P30953 314 aa10.43□□□□□ -0.74
SF3A3-204ENST00000462258 SLC8A1P32418 973 aa10.43□□□□□ -0.74
SF3A3-204ENST00000462258 AFF3P51826 1226 aaKnown RBP10.43□□□□□ -0.74
SF3A3-204ENST00000462258 ADPRHP54922 357 aa10.43□□□□□ -0.74
SF3A3-204ENST00000462258 HDAC4P56524 1084 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms