RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 SERPINB11Q96P15 392 aa10.65□□□□□ -0.7
CPNE1-218ENST00000439806 FCRL3Q96P31 734 aaPredicted RBP10.65□□□□□ -0.7
CPNE1-218ENST00000439806 PPP1R2P1Q96PQ5 205 aa10.65□□□□□ -0.7
CPNE1-218ENST00000439806 TBL1YQ9BQ87 522 aa10.65□□□□□ -0.7
CPNE1-218ENST00000439806 APOL2Q9BQE5 337 aa10.65□□□□□ -0.7
CPNE1-218ENST00000439806 IL22Q9GZX6 179 aa10.65□□□□□ -0.7
CPNE1-218ENST00000439806 ZCWPW1Q9H0M4 648 aa10.65□□□□□ -0.7
CPNE1-218ENST00000439806 KCNK13Q9HB14 408 aa10.65□□□□□ -0.7
CPNE1-218ENST00000439806 THAP1Q9NVV9 213 aa10.65□□□□□ -0.7
CPNE1-218ENST00000439806 NSMCE4AQ9NXX6 385 aa10.65□□□□□ -0.7
CPNE1-218ENST00000439806 SFMBT1Q9UHJ3 866 aa10.65□□□□□ -0.7
CPNE1-218ENST00000439806 LNPEPQ9UIQ6 1025 aa10.65□□□□□ -0.7
CPNE1-218ENST00000439806 SOX13Q9UN79 622 aa10.65□□□□□ -0.7
CPNE1-218ENST00000439806 MAGED2Q9UNF1 606 aaPredicted RBP10.65□□□□□ -0.7
CPNE1-218ENST00000439806 AAR2Q9Y312 384 aaKnown RBP10.65□□□□□ -0.7
CPNE1-218ENST00000439806 PSAT1Q9Y617 370 aa10.65□□□□□ -0.7
CPNE1-218ENST00000439806 A0A1W2PQH9 124 aa10.64□□□□□ -0.71
CPNE1-218ENST00000439806 TMEM88BA6NKF7 163 aa10.64□□□□□ -0.71
CPNE1-218ENST00000439806 A8MUI8 341 aa10.64□□□□□ -0.71
CPNE1-218ENST00000439806 TMEM189-UBE2V1I3L0A0 370 aa10.64□□□□□ -0.71
CPNE1-218ENST00000439806 FCHO1O14526 889 aa10.64□□□□□ -0.71
CPNE1-218ENST00000439806 MSI1O43347 362 aaKnown RBP10.64□□□□□ -0.71
CPNE1-218ENST00000439806 TIMM44O43615 452 aa10.64□□□□□ -0.71
CPNE1-218ENST00000439806 PLIN3O60664 434 aa10.64□□□□□ -0.71
CPNE1-218ENST00000439806 DDHD2O94830 711 aa10.64□□□□□ -0.71
CPNE1-218ENST00000439806 MOCS2O96007 188 aaPredicted RBP10.64□□□□□ -0.71
CPNE1-218ENST00000439806 ALDOAP04075 364 aaKnown RBP10.64□□□□□ -0.71
CPNE1-218ENST00000439806 ATP5BP06576 529 aaKnown RBP10.64□□□□□ -0.71
CPNE1-218ENST00000439806 DLDP09622 509 aaKnown RBP10.64□□□□□ -0.71
CPNE1-218ENST00000439806 T-ENOLP0DO92 83 aa10.64□□□□□ -0.71
CPNE1-218ENST00000439806 CKBP12277 381 aa10.64□□□□□ -0.71
CPNE1-218ENST00000439806 CCND1P24385 295 aa10.64□□□□□ -0.71
CPNE1-218ENST00000439806 HOXC13P31276 330 aa10.64□□□□□ -0.71
CPNE1-218ENST00000439806 LIMK2P53671 638 aa10.64□□□□□ -0.71
CPNE1-218ENST00000439806 OCRLQ01968 901 aa10.64□□□□□ -0.71
CPNE1-218ENST00000439806 SP3Q02447 781 aa10.64□□□□□ -0.71
CPNE1-218ENST00000439806 MPP3Q13368 585 aa10.64□□□□□ -0.71
CPNE1-218ENST00000439806 E2F5Q15329 346 aa10.64□□□□□ -0.71
CPNE1-218ENST00000439806 NFE2Q16621 373 aaPredicted RBP10.64□□□□□ -0.71
CPNE1-218ENST00000439806 ANO4Q32M45 955 aa10.64□□□□□ -0.71
CPNE1-218ENST00000439806 CCDC153Q494R4 210 aa10.64□□□□□ -0.71
CPNE1-218ENST00000439806 CERCAMQ5T4B2 595 aa10.64□□□□□ -0.71
CPNE1-218ENST00000439806 SWT1Q5T5J6 900 aaKnown RBP10.64□□□□□ -0.71
CPNE1-218ENST00000439806 SLC24A5Q71RS6 500 aa10.64□□□□□ -0.71
CPNE1-218ENST00000439806 TMEM135Q86UB9 458 aa10.64□□□□□ -0.71
CPNE1-218ENST00000439806 NUP93Q8N1F7 819 aa10.64□□□□□ -0.71
CPNE1-218ENST00000439806 DCLK2Q8N568 766 aa10.64□□□□□ -0.71
CPNE1-218ENST00000439806 PPHLN1Q8NEY8 458 aaKnown RBP10.64□□□□□ -0.71
CPNE1-218ENST00000439806 PPP4R1Q8TF05 950 aa10.64□□□□□ -0.71
CPNE1-218ENST00000439806 SREK1Q8WXA9 508 aaKnown RBP10.64□□□□□ -0.71
CPNE1-218ENST00000439806 SLC7A6OSQ96CW6 309 aaPredicted RBP10.64□□□□□ -0.71
CPNE1-218ENST00000439806 FCRL2Q96LA5 508 aaPredicted RBP10.64□□□□□ -0.71
CPNE1-218ENST00000439806 TSNARE1Q96NA8 513 aa10.64□□□□□ -0.71
CPNE1-218ENST00000439806 FCRL5Q96RD9 977 aa10.64□□□□□ -0.71
CPNE1-218ENST00000439806 FICDQ9BVA6 458 aa10.64□□□□□ -0.71
CPNE1-218ENST00000439806 SLC39A8Q9C0K1 460 aa10.64□□□□□ -0.71
CPNE1-218ENST00000439806 FBXO44Q9H4M3 255 aa10.64□□□□□ -0.71
CPNE1-218ENST00000439806 FAM96AQ9H5X1 160 aa10.64□□□□□ -0.71
CPNE1-218ENST00000439806 GLOD4Q9HC38 313 aa10.64□□□□□ -0.71
CPNE1-218ENST00000439806 SNX15Q9NRS6 342 aa10.64□□□□□ -0.71
CPNE1-218ENST00000439806 IARS2Q9NSE4 1012 aaKnown RBP10.64□□□□□ -0.71
CPNE1-218ENST00000439806 C20orf96Q9NUD7 363 aaPredicted RBP10.64□□□□□ -0.71
CPNE1-218ENST00000439806 ARL8BQ9NVJ2 186 aa10.64□□□□□ -0.71
CPNE1-218ENST00000439806 RNF186Q9NXI6 227 aa10.64□□□□□ -0.71
CPNE1-218ENST00000439806 UBP1Q9NZI7 540 aa10.64□□□□□ -0.71
CPNE1-218ENST00000439806 IL1RAPL1Q9NZN1 696 aa10.64□□□□□ -0.71
CPNE1-218ENST00000439806 PPARGC1AQ9UBK2 798 aaKnown RBP10.64□□□□□ -0.71
CPNE1-218ENST00000439806 MID2Q9UJV3 735 aa10.64□□□□□ -0.71
CPNE1-218ENST00000439806 PRG3Q9Y2Y8 225 aaPredicted RBP10.64□□□□□ -0.71
CPNE1-218ENST00000439806 HBS1LQ9Y450 684 aaKnown RBP10.64□□□□□ -0.71
CPNE1-218ENST00000439806 PCDHB5Q9Y5E4 795 aa10.64□□□□□ -0.71
CPNE1-218ENST00000439806 VWA8A3KMH1 1905 aa10.64□□□□□ -0.71
CPNE1-218ENST00000439806 ZCWPW2A0A1B0GU75 182 aa10.63□□□□□ -0.71
CPNE1-218ENST00000439806 C2orf71A6NGG8 1288 aa10.63□□□□□ -0.71
CPNE1-218ENST00000439806 MOXD2PA6NHM9 499 aa10.63□□□□□ -0.71
CPNE1-218ENST00000439806 E9PAM4 449 aa10.63□□□□□ -0.71
CPNE1-218ENST00000439806 F8W810 466 aa10.63□□□□□ -0.71
CPNE1-218ENST00000439806 TRAFD1O14545 582 aaPredicted RBP10.63□□□□□ -0.71
CPNE1-218ENST00000439806 TNFRSF10BO14763 440 aa10.63□□□□□ -0.71
CPNE1-218ENST00000439806 CCDC22O60826 627 aa10.63□□□□□ -0.71
CPNE1-218ENST00000439806 SNNO75324 88 aaPredicted RBP10.63□□□□□ -0.71
CPNE1-218ENST00000439806 TADA2AO75478 443 aa10.63□□□□□ -0.71
CPNE1-218ENST00000439806 TOP3BO95985 862 aaKnown RBP10.63□□□□□ -0.71
CPNE1-218ENST00000439806 PROCP04070 461 aa10.63□□□□□ -0.71
CPNE1-218ENST00000439806 SERPINE1P05121 402 aa10.63□□□□□ -0.71
CPNE1-218ENST00000439806 KITP10721 976 aa10.63□□□□□ -0.71
CPNE1-218ENST00000439806 SLC2A3P11169 496 aa10.63□□□□□ -0.71
CPNE1-218ENST00000439806 ESRRAP11474 423 aaPredicted RBP10.63□□□□□ -0.71
CPNE1-218ENST00000439806 TPH1P17752 444 aa10.63□□□□□ -0.71
CPNE1-218ENST00000439806 CALB2P22676 271 aa10.63□□□□□ -0.71
CPNE1-218ENST00000439806 SLC1A6P48664 564 aa10.63□□□□□ -0.71
CPNE1-218ENST00000439806 TUBP50607 506 aa10.63□□□□□ -0.71
CPNE1-218ENST00000439806 DSC1Q08554 894 aa10.63□□□□□ -0.71
CPNE1-218ENST00000439806 KRT72Q14CN4 511 aa10.63□□□□□ -0.71
CPNE1-218ENST00000439806 PREPLQ4J6C6 727 aaPredicted RBP10.63□□□□□ -0.71
CPNE1-218ENST00000439806 PCID2Q5JVF3 399 aa10.63□□□□□ -0.71
CPNE1-218ENST00000439806 CLLU1OSQ5K130 101 aa10.63□□□□□ -0.71
CPNE1-218ENST00000439806 TEDDM1Q5T9Z0 273 aa10.63□□□□□ -0.71
CPNE1-218ENST00000439806 MANEALQ5VSG8 457 aa10.63□□□□□ -0.71
CPNE1-218ENST00000439806 FAM91A1Q658Y4 838 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms