RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 CTNNAL1Q9UBT7 734 aa11.75□□□□□ -0.53
PTCH1-208ENST00000430669 MAPRE3Q9UPY8 281 aa11.75□□□□□ -0.53
PTCH1-208ENST00000430669 RASSF10A6NK89 507 aa11.75□□□□□ -0.53
PTCH1-208ENST00000430669 ZNF839A8K0R7 811 aa11.75□□□□□ -0.53
PTCH1-208ENST00000430669 SUPT7LO94864 414 aa11.75□□□□□ -0.53
PTCH1-208ENST00000430669 ACADSP16219 412 aa11.75□□□□□ -0.53
PTCH1-208ENST00000430669 CYP2A7P20853 494 aa11.75□□□□□ -0.53
PTCH1-208ENST00000430669 ADSSP30520 456 aa11.75□□□□□ -0.53
PTCH1-208ENST00000430669 SCNN1BP51168 640 aa11.75□□□□□ -0.53
PTCH1-208ENST00000430669 PPM1LQ5SGD2 360 aa11.75□□□□□ -0.53
PTCH1-208ENST00000430669 ZFP1Q6P2D0 407 aa11.75□□□□□ -0.53
PTCH1-208ENST00000430669 POTEHQ6S545 545 aa11.75□□□□□ -0.53
PTCH1-208ENST00000430669 EME1Q96AY2 570 aa11.75□□□□□ -0.53
PTCH1-208ENST00000430669 KLF6Q99612 283 aaPredicted RBP11.75□□□□□ -0.53
PTCH1-208ENST00000430669 ACSS3Q9H6R3 686 aa11.75□□□□□ -0.53
PTCH1-208ENST00000430669 CCDC78A2IDD5 438 aa11.75□□□□□ -0.53
PTCH1-208ENST00000430669 KATNA1O75449 491 aa11.75□□□□□ -0.53
PTCH1-208ENST00000430669 CDKN2BP42772 138 aa11.75□□□□□ -0.53
PTCH1-208ENST00000430669 MAPK9P45984 424 aa11.75□□□□□ -0.53
PTCH1-208ENST00000430669 CYB5D1Q6P9G0 228 aa11.75□□□□□ -0.53
PTCH1-208ENST00000430669 SLC26A9Q7LBE3 791 aa11.75□□□□□ -0.53
PTCH1-208ENST00000430669 ADAM32Q8TC27 787 aa11.75□□□□□ -0.53
PTCH1-208ENST00000430669 LZICQ8WZA0 190 aa11.75□□□□□ -0.53
PTCH1-208ENST00000430669 POP5Q969H6 163 aaKnown RBP11.75□□□□□ -0.53
PTCH1-208ENST00000430669 APOL5Q9BWW9 433 aa11.75□□□□□ -0.53
PTCH1-208ENST00000430669 EIF2AQ9BY44 585 aaKnown RBP11.75□□□□□ -0.53
PTCH1-208ENST00000430669 GIMAP4Q9NUV9 329 aa11.75□□□□□ -0.53
PTCH1-208ENST00000430669 STX18Q9P2W9 335 aaKnown RBP11.75□□□□□ -0.53
PTCH1-208ENST00000430669 TRIM17Q9Y577 477 aa11.75□□□□□ -0.53
PTCH1-208ENST00000430669 TNPO3Q9Y5L0 923 aaKnown RBP11.75□□□□□ -0.53
PTCH1-208ENST00000430669 A0A0U1RQJ8 604 aa11.75□□□□□ -0.53
PTCH1-208ENST00000430669 C5orf58C9J3I9 102 aa11.75□□□□□ -0.53
PTCH1-208ENST00000430669 UNGP13051 313 aaPredicted RBP11.75□□□□□ -0.53
PTCH1-208ENST00000430669 ASTE1Q2TB18 679 aaPredicted RBP11.75□□□□□ -0.53
PTCH1-208ENST00000430669 TFAP2DQ7Z6R9 452 aa11.75□□□□□ -0.53
PTCH1-208ENST00000430669 LGI2Q8N0V4 545 aa11.75□□□□□ -0.53
PTCH1-208ENST00000430669 C1orf127Q8N9H9 656 aa11.75□□□□□ -0.53
PTCH1-208ENST00000430669 SLC39A8Q9C0K1 460 aa11.75□□□□□ -0.53
PTCH1-208ENST00000430669 RGS18Q9NS28 235 aa11.75□□□□□ -0.53
PTCH1-208ENST00000430669 SERPINA4P29622 427 aa11.75□□□□□ -0.53
PTCH1-208ENST00000430669 CD52P31358 61 aa11.75□□□□□ -0.53
PTCH1-208ENST00000430669 CHKAP35790 457 aa11.75□□□□□ -0.53
PTCH1-208ENST00000430669 CSE1LP55060 971 aaKnown RBP11.75□□□□□ -0.53
PTCH1-208ENST00000430669 PTK2BQ14289 1009 aa11.75□□□□□ -0.53
PTCH1-208ENST00000430669 APTXQ7Z2E3 356 aaKnown RBP11.75□□□□□ -0.53
PTCH1-208ENST00000430669 BTN2A3PQ96KV6 586 aa11.75□□□□□ -0.53
PTCH1-208ENST00000430669 GNPTGQ9UJJ9 305 aa11.75□□□□□ -0.53
PTCH1-208ENST00000430669 GOT1P17174 413 aa11.75□□□□□ -0.53
PTCH1-208ENST00000430669 MTM1Q13496 603 aa11.75□□□□□ -0.53
PTCH1-208ENST00000430669 NLGN2Q8NFZ4 835 aa11.75□□□□□ -0.53
PTCH1-208ENST00000430669 MAGEC3Q8TD91 643 aa11.75□□□□□ -0.53
PTCH1-208ENST00000430669 SLC9A7Q96T83 725 aa11.75□□□□□ -0.53
PTCH1-208ENST00000430669 C16orf96A6NNT2 1141 aa11.74□□□□□ -0.53
PTCH1-208ENST00000430669 ASGR1P07306 291 aa11.74□□□□□ -0.53
PTCH1-208ENST00000430669 ASPAP45381 313 aa11.74□□□□□ -0.53
PTCH1-208ENST00000430669 FLT3LGP49771 235 aa11.74□□□□□ -0.53
PTCH1-208ENST00000430669 CLCN5P51795 746 aa11.74□□□□□ -0.53
PTCH1-208ENST00000430669 PTPN20Q4JDL3 420 aa11.74□□□□□ -0.53
PTCH1-208ENST00000430669 TTMPQ5BVD1 217 aa11.74□□□□□ -0.53
PTCH1-208ENST00000430669 RNF43Q68DV7 783 aa11.74□□□□□ -0.53
PTCH1-208ENST00000430669 FAM45BPQ6NSW5 357 aa11.74□□□□□ -0.53
PTCH1-208ENST00000430669 LRRC8BQ6P9F7 803 aa11.74□□□□□ -0.53
PTCH1-208ENST00000430669 RPAINQ86UA6 219 aa11.74□□□□□ -0.53
PTCH1-208ENST00000430669 AMIGO3Q86WK7 504 aa11.74□□□□□ -0.53
PTCH1-208ENST00000430669 FAM45AQ8TCE6 357 aa11.74□□□□□ -0.53
PTCH1-208ENST00000430669 SLCO2A1Q92959 643 aa11.74□□□□□ -0.53
PTCH1-208ENST00000430669 REPS1Q96D71 796 aa11.74□□□□□ -0.53
PTCH1-208ENST00000430669 EBNA1BP2Q99848 306 aaKnown RBP11.74□□□□□ -0.53
PTCH1-208ENST00000430669 ZNF556Q9HAH1 456 aa11.74□□□□□ -0.53
PTCH1-208ENST00000430669 ATP13A1Q9HD20 1204 aa11.74□□□□□ -0.53
PTCH1-208ENST00000430669 EIF2B3Q9NR50 452 aaKnown RBP11.74□□□□□ -0.53
PTCH1-208ENST00000430669 STXBP5LQ9Y2K9 1186 aa11.74□□□□□ -0.53
PTCH1-208ENST00000430669 FAM32AQ9Y421 112 aaKnown RBP11.74□□□□□ -0.53
PTCH1-208ENST00000430669 QSOX1O00391 747 aa11.74□□□□□ -0.53
PTCH1-208ENST00000430669 GRB14Q14449 540 aa11.74□□□□□ -0.53
PTCH1-208ENST00000430669 PDK4Q16654 411 aa11.74□□□□□ -0.53
PTCH1-208ENST00000430669 SPPL2BQ8TCT7 592 aa11.74□□□□□ -0.53
PTCH1-208ENST00000430669 SENP6Q9GZR1 1112 aaPredicted RBP11.74□□□□□ -0.53
PTCH1-208ENST00000430669 IL1RAPL1Q9NZN1 696 aa11.74□□□□□ -0.53
PTCH1-208ENST00000430669 PDE4DIPQ5VU43 2346 aa11.74□□□□□ -0.53
PTCH1-208ENST00000430669 TREHO43280 583 aa11.74□□□□□ -0.53
PTCH1-208ENST00000430669 TRIM13O60858 407 aa11.74□□□□□ -0.53
PTCH1-208ENST00000430669 ADRA1DP25100 572 aa11.74□□□□□ -0.53
PTCH1-208ENST00000430669 MARCKSL1P49006 195 aa11.74□□□□□ -0.53
PTCH1-208ENST00000430669 SNRPD1P62314 119 aaKnown RBP11.74□□□□□ -0.53
PTCH1-208ENST00000430669 SULT2A1Q06520 285 aa11.74□□□□□ -0.53
PTCH1-208ENST00000430669 ARMC12Q5T9G4 340 aa11.74□□□□□ -0.53
PTCH1-208ENST00000430669 PKN3Q6P5Z2 889 aa11.74□□□□□ -0.53
PTCH1-208ENST00000430669 TMC7Q7Z402 723 aa11.74□□□□□ -0.53
PTCH1-208ENST00000430669 HJURPQ8NCD3 748 aaPredicted RBP11.74□□□□□ -0.53
PTCH1-208ENST00000430669 CPXM1Q96SM3 734 aa11.74□□□□□ -0.53
PTCH1-208ENST00000430669 MRPL57Q9BQC6 102 aaKnown RBP11.74□□□□□ -0.53
PTCH1-208ENST00000430669 ACP6Q9NPH0 428 aa11.74□□□□□ -0.53
PTCH1-208ENST00000430669 ALOX15BO15296 676 aa11.74□□□□□ -0.53
PTCH1-208ENST00000430669 SELPP16109 830 aa11.74□□□□□ -0.53
PTCH1-208ENST00000430669 COMMD8Q9NX08 183 aa11.74□□□□□ -0.53
PTCH1-208ENST00000430669 A0A096LPK6 155 aa11.74□□□□□ -0.53
PTCH1-208ENST00000430669 PGK1P00558 417 aa11.74□□□□□ -0.53
PTCH1-208ENST00000430669 RXRGP48443 463 aa11.74□□□□□ -0.53
PTCH1-208ENST00000430669 SERPINB10P48595 397 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms