RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 INSCQ1MX18 579 aa15.72■□□□□ 0.11
CPSF7-202ENST00000394888 CXCL17Q6UXB2 119 aa15.72■□□□□ 0.11
CPSF7-202ENST00000394888 TRIB2Q92519 343 aa15.72■□□□□ 0.11
CPSF7-202ENST00000394888 AGAP3Q96P47 875 aa15.72■□□□□ 0.11
CPSF7-202ENST00000394888 GPR78Q96P69 363 aa15.72■□□□□ 0.11
CPSF7-202ENST00000394888 NUDCD1Q96RS6 583 aa15.72■□□□□ 0.11
CPSF7-202ENST00000394888 DDIT4Q9NX09 232 aa15.72■□□□□ 0.11
CPSF7-202ENST00000394888 OR12D3Q9UGF7 316 aa15.72■□□□□ 0.11
CPSF7-202ENST00000394888 STAP1Q9ULZ2 295 aa15.72■□□□□ 0.11
CPSF7-202ENST00000394888 RPS6KL1Q9Y6S9 549 aa15.72■□□□□ 0.11
CPSF7-202ENST00000394888 MAFKO60675 156 aa15.72■□□□□ 0.11
CPSF7-202ENST00000394888 SLC1A6P48664 564 aa15.72■□□□□ 0.11
CPSF7-202ENST00000394888 LHX1P48742 406 aa15.72■□□□□ 0.11
CPSF7-202ENST00000394888 INTS6LQ5JSJ4 861 aaKnown RBP15.72■□□□□ 0.11
CPSF7-202ENST00000394888 TSTD2Q5T7W7 516 aa15.72■□□□□ 0.11
CPSF7-202ENST00000394888 RASSF3Q86WH2 238 aa15.72■□□□□ 0.11
CPSF7-202ENST00000394888 CCNJLQ8IV13 435 aa15.72■□□□□ 0.11
CPSF7-202ENST00000394888 TNS4Q8IZW8 715 aa15.72■□□□□ 0.11
CPSF7-202ENST00000394888 SIX6OS1Q8N1H7 587 aa15.72■□□□□ 0.11
CPSF7-202ENST00000394888 CCNYQ8ND76 341 aa15.72■□□□□ 0.11
CPSF7-202ENST00000394888 DQX1Q8TE96 717 aaKnown RBP15.72■□□□□ 0.11
CPSF7-202ENST00000394888 CPNE1Q99829 537 aa15.72■□□□□ 0.11
CPSF7-202ENST00000394888 LRRC4Q9HBW1 653 aa15.72■□□□□ 0.11
CPSF7-202ENST00000394888 VANGL2Q9ULK5 521 aa15.72■□□□□ 0.11
CPSF7-202ENST00000394888 GLRA3O75311 464 aa15.72■□□□□ 0.11
CPSF7-202ENST00000394888 THP07101 528 aa15.72■□□□□ 0.11
CPSF7-202ENST00000394888 TEX9Q8N6V9 391 aa15.72■□□□□ 0.11
CPSF7-202ENST00000394888 CLEC11AQ9Y240 323 aa15.72■□□□□ 0.11
CPSF7-202ENST00000394888 INPPL1O15357 1258 aa15.71■□□□□ 0.11
CPSF7-202ENST00000394888 GP5P40197 560 aa15.71■□□□□ 0.11
CPSF7-202ENST00000394888 STX3Q13277 289 aa15.71■□□□□ 0.11
CPSF7-202ENST00000394888 TAF2Q6P1X5 1199 aa15.71■□□□□ 0.11
CPSF7-202ENST00000394888 PID1Q7Z2X4 250 aa15.71■□□□□ 0.11
CPSF7-202ENST00000394888 ZNF598Q86UK7 904 aaKnown RBP15.71■□□□□ 0.11
CPSF7-202ENST00000394888 SMARCD1Q96GM5 515 aa15.71■□□□□ 0.11
CPSF7-202ENST00000394888 ZNF333Q96JL9 665 aa15.71■□□□□ 0.11
CPSF7-202ENST00000394888 CXorf56Q9H5V9 222 aa15.71■□□□□ 0.11
CPSF7-202ENST00000394888 WASF2Q9Y6W5 498 aa15.71■□□□□ 0.11
CPSF7-202ENST00000394888 ZBTB14O43829 449 aa15.71■□□□□ 0.11
CPSF7-202ENST00000394888 MAGEC1O60732 1142 aa15.71■□□□□ 0.11
CPSF7-202ENST00000394888 DUSP11O75319 330 aaKnown RBP15.71■□□□□ 0.11
CPSF7-202ENST00000394888 CCR10P46092 362 aa15.71■□□□□ 0.11
CPSF7-202ENST00000394888 SEPT7Q16181 437 aaKnown RBP15.71■□□□□ 0.11
CPSF7-202ENST00000394888 BSPRYQ5W0U4 402 aa15.71■□□□□ 0.11
CPSF7-202ENST00000394888 SPATA22Q8NHS9 363 aa15.71■□□□□ 0.11
CPSF7-202ENST00000394888 PIWIL2Q8TC59 973 aaKnown RBP15.71■□□□□ 0.11
CPSF7-202ENST00000394888 APOL2Q9BQE5 337 aa15.71■□□□□ 0.11
CPSF7-202ENST00000394888 KIFC1Q9BW19 673 aa15.71■□□□□ 0.11
CPSF7-202ENST00000394888 KATNAL1Q9BW62 490 aa15.71■□□□□ 0.11
CPSF7-202ENST00000394888 ZNF385DQ9H6B1 395 aa15.71■□□□□ 0.11
CPSF7-202ENST00000394888 SOX13Q9UN79 622 aa15.71■□□□□ 0.11
CPSF7-202ENST00000394888 DNAJC16Q9Y2G8 782 aa15.71■□□□□ 0.11
CPSF7-202ENST00000394888 ZNF623O75123 536 aa15.71■□□□□ 0.1
CPSF7-202ENST00000394888 DLG1Q12959 904 aa15.71■□□□□ 0.1
CPSF7-202ENST00000394888 PAN2Q504Q3 1202 aaKnown RBP15.71■□□□□ 0.1
CPSF7-202ENST00000394888 ATG16L1Q676U5 607 aa15.71■□□□□ 0.1
CPSF7-202ENST00000394888 CNTN4Q8IWV2 1026 aa15.71■□□□□ 0.1
CPSF7-202ENST00000394888 CFAP61Q8NHU2 1237 aa15.71■□□□□ 0.1
CPSF7-202ENST00000394888 IRGQQ8WZA9 623 aa15.71■□□□□ 0.1
CPSF7-202ENST00000394888 MED10Q9BTT4 135 aa15.71■□□□□ 0.1
CPSF7-202ENST00000394888 C1orf21Q9H246 121 aa15.71■□□□□ 0.1
CPSF7-202ENST00000394888 SLC7A8Q9UHI5 535 aa15.71■□□□□ 0.1
CPSF7-202ENST00000394888 GIT1Q9Y2X7 761 aa15.71■□□□□ 0.1
CPSF7-202ENST00000394888 MAP3K13O43283 966 aa15.7■□□□□ 0.1
CPSF7-202ENST00000394888 PGK1P00558 417 aa15.7■□□□□ 0.1
CPSF7-202ENST00000394888 CTSHP09668 335 aa15.7■□□□□ 0.1
CPSF7-202ENST00000394888 BDNFP23560 247 aa15.7■□□□□ 0.1
CPSF7-202ENST00000394888 TPI1P60174 286 aa15.7■□□□□ 0.1
CPSF7-202ENST00000394888 GRTP1Q5TC63 336 aa15.7■□□□□ 0.1
CPSF7-202ENST00000394888 FAM219BQ5XKK7 198 aa15.7■□□□□ 0.1
CPSF7-202ENST00000394888 ANO7Q6IWH7 933 aa15.7■□□□□ 0.1
CPSF7-202ENST00000394888 IFNL1Q8IU54 200 aa15.7■□□□□ 0.1
CPSF7-202ENST00000394888 CENPLQ8N0S6 344 aaPredicted RBP15.7■□□□□ 0.1
CPSF7-202ENST00000394888 CELF6Q96J87 481 aaKnown RBP15.7■□□□□ 0.1
CPSF7-202ENST00000394888 IL12RB2Q99665 862 aa15.7■□□□□ 0.1
CPSF7-202ENST00000394888 NAT9Q9BTE0 207 aa15.7■□□□□ 0.1
CPSF7-202ENST00000394888 NMUR1Q9HB89 426 aa15.7■□□□□ 0.1
CPSF7-202ENST00000394888 CHST12Q9NRB3 414 aa15.7■□□□□ 0.1
CPSF7-202ENST00000394888 GEMIN8Q9NWZ8 242 aaKnown RBP15.7■□□□□ 0.1
CPSF7-202ENST00000394888 UBP1Q9NZI7 540 aa15.7■□□□□ 0.1
CPSF7-202ENST00000394888 MRPL42Q9Y6G3 142 aaKnown RBP15.7■□□□□ 0.1
CPSF7-202ENST00000394888 KCNU1A8MYU2 1149 aa15.7■□□□□ 0.1
CPSF7-202ENST00000394888 ENO1P06733 434 aaKnown RBP15.7■□□□□ 0.1
CPSF7-202ENST00000394888 POLBP06746 335 aa15.7■□□□□ 0.1
CPSF7-202ENST00000394888 TPH1P17752 444 aa15.7■□□□□ 0.1
CPSF7-202ENST00000394888 LPIN1Q14693 890 aa15.7■□□□□ 0.1
CPSF7-202ENST00000394888 LGSNQ5TDP6 509 aa15.7■□□□□ 0.1
CPSF7-202ENST00000394888 RTN4RL1Q86UN2 441 aaPredicted RBP15.7■□□□□ 0.1
CPSF7-202ENST00000394888 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.7■□□□□ 0.1
CPSF7-202ENST00000394888 ZIC5Q96T25 663 aa15.7■□□□□ 0.1
CPSF7-202ENST00000394888 ACBD6Q9BR61 282 aa15.7■□□□□ 0.1
CPSF7-202ENST00000394888 OSBPL2Q9H1P3 480 aa15.7■□□□□ 0.1
CPSF7-202ENST00000394888 DNAJC28Q9NX36 388 aa15.7■□□□□ 0.1
CPSF7-202ENST00000394888 DCDC2Q9UHG0 476 aa15.7■□□□□ 0.1
CPSF7-202ENST00000394888 GABRQQ9UN88 632 aa15.7■□□□□ 0.1
CPSF7-202ENST00000394888 TUBP50607 506 aa15.7■□□□□ 0.1
CPSF7-202ENST00000394888 CASC4Q6P4E1 433 aa15.7■□□□□ 0.1
CPSF7-202ENST00000394888 BEND5Q7L4P6 421 aa15.7■□□□□ 0.1
CPSF7-202ENST00000394888 LSMEM2Q8N112 164 aa15.7■□□□□ 0.1
CPSF7-202ENST00000394888 NMRK1Q9NWW6 199 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms