RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 NEPROQ6NW34 567 aa9.27□□□□□ -0.92
SMARCA1-202ENST00000371122 PHF13Q86YI8 300 aaPredicted RBP9.27□□□□□ -0.92
SMARCA1-202ENST00000371122 ATP6V0D2Q8N8Y2 350 aa9.27□□□□□ -0.92
SMARCA1-202ENST00000371122 CALML6Q8TD86 181 aa9.27□□□□□ -0.92
SMARCA1-202ENST00000371122 CPT1BQ92523 772 aa9.27□□□□□ -0.92
SMARCA1-202ENST00000371122 ESAMQ96AP7 390 aa9.27□□□□□ -0.92
SMARCA1-202ENST00000371122 SH3GL2Q99962 352 aa9.27□□□□□ -0.92
SMARCA1-202ENST00000371122 RHOBTB2Q9BYZ6 727 aa9.27□□□□□ -0.92
SMARCA1-202ENST00000371122 CHRAC1Q9NRG0 131 aa9.27□□□□□ -0.92
SMARCA1-202ENST00000371122 ARL8BQ9NVJ2 186 aa9.27□□□□□ -0.92
SMARCA1-202ENST00000371122 TMEM161AQ9NX61 479 aa9.27□□□□□ -0.92
SMARCA1-202ENST00000371122 PKD2L2Q9NZM6 624 aa9.27□□□□□ -0.92
SMARCA1-202ENST00000371122 BTRCQ9Y297 605 aa9.27□□□□□ -0.92
SMARCA1-202ENST00000371122 AAR2Q9Y312 384 aaKnown RBP9.27□□□□□ -0.92
SMARCA1-202ENST00000371122 DICER1Q9UPY3 1922 aaKnown RBP9.27□□□□□ -0.93
SMARCA1-202ENST00000371122 CES2O00748 559 aa9.27□□□□□ -0.93
SMARCA1-202ENST00000371122 UBDO15205 165 aa9.27□□□□□ -0.93
SMARCA1-202ENST00000371122 CCNT2O60583 730 aaKnown RBP9.27□□□□□ -0.93
SMARCA1-202ENST00000371122 GLP2RO95838 553 aa9.27□□□□□ -0.93
SMARCA1-202ENST00000371122 MT-CYBP00156 380 aaPredicted RBP9.27□□□□□ -0.93
SMARCA1-202ENST00000371122 CYBBP04839 570 aa9.27□□□□□ -0.93
SMARCA1-202ENST00000371122 HNRNPCP07910 306 aaKnown RBP eCLIP9.27□□□□□ -0.932e-7■■■■□ 19.3
SMARCA1-202ENST00000371122 ABCB1P08183 1280 aaPredicted RBP9.27□□□□□ -0.93
SMARCA1-202ENST00000371122 ATP6V1B2P21281 511 aa9.27□□□□□ -0.93
SMARCA1-202ENST00000371122 ATP6V1E1P36543 226 aa9.27□□□□□ -0.93
SMARCA1-202ENST00000371122 PIK3CGP48736 1102 aa9.27□□□□□ -0.93
SMARCA1-202ENST00000371122 LHX1P48742 406 aa9.27□□□□□ -0.93
SMARCA1-202ENST00000371122 OASLQ15646 514 aaKnown RBP9.27□□□□□ -0.93
SMARCA1-202ENST00000371122 TTC23LQ6PF05 361 aa9.27□□□□□ -0.93
SMARCA1-202ENST00000371122 SAPCD2Q86UD0 394 aa9.27□□□□□ -0.93
SMARCA1-202ENST00000371122 ECHDC2Q86YB7 292 aa9.27□□□□□ -0.93
SMARCA1-202ENST00000371122 C10orf107Q8IVU9 208 aa9.27□□□□□ -0.93
SMARCA1-202ENST00000371122 MREGQ8N565 214 aa9.27□□□□□ -0.93
SMARCA1-202ENST00000371122 ATXN2LQ8WWM7 1075 aaKnown RBP9.27□□□□□ -0.93
SMARCA1-202ENST00000371122 FAM162AQ96A26 154 aa9.27□□□□□ -0.93
SMARCA1-202ENST00000371122 NRBF2Q96F24 287 aa9.27□□□□□ -0.93
SMARCA1-202ENST00000371122 TRIM15Q9C019 465 aa9.27□□□□□ -0.93
SMARCA1-202ENST00000371122 TMEM134Q9H6X4 195 aa9.27□□□□□ -0.93
SMARCA1-202ENST00000371122 DMAC2Q9NW81 257 aa9.27□□□□□ -0.93
SMARCA1-202ENST00000371122 GRHL1Q9NZI5 618 aa9.27□□□□□ -0.93
SMARCA1-202ENST00000371122 CACNA1SQ13698 1873 aa9.27□□□□□ -0.93
SMARCA1-202ENST00000371122 SMIM28A0A1B0GU29 152 aa9.27□□□□□ -0.93
SMARCA1-202ENST00000371122 TTC24A2A3L6 582 aaPredicted RBP9.27□□□□□ -0.93
SMARCA1-202ENST00000371122 FFAR3O14843 346 aa9.27□□□□□ -0.93
SMARCA1-202ENST00000371122 TM9SF1O15321 606 aa9.27□□□□□ -0.93
SMARCA1-202ENST00000371122 GPR42O15529 346 aa9.27□□□□□ -0.93
SMARCA1-202ENST00000371122 MTSS1O43312 755 aa9.27□□□□□ -0.93
SMARCA1-202ENST00000371122 CPSF4O95639 269 aaKnown RBP9.27□□□□□ -0.93
SMARCA1-202ENST00000371122 MT-ND1P03886 318 aa9.27□□□□□ -0.93
SMARCA1-202ENST00000371122 SERPINE1P05121 402 aa9.27□□□□□ -0.93
SMARCA1-202ENST00000371122 ETS2P15036 469 aa9.27□□□□□ -0.93
SMARCA1-202ENST00000371122 POU1F1P28069 291 aa9.27□□□□□ -0.93
SMARCA1-202ENST00000371122 SOAT1P35610 550 aa9.27□□□□□ -0.93
SMARCA1-202ENST00000371122 MMP13P45452 471 aa9.27□□□□□ -0.93
SMARCA1-202ENST00000371122 SLC11A2P49281 568 aa9.27□□□□□ -0.93
SMARCA1-202ENST00000371122 CACNA2D1P54289 1103 aa9.27□□□□□ -0.93
SMARCA1-202ENST00000371122 OAZ1P54368 228 aa9.27□□□□□ -0.93
SMARCA1-202ENST00000371122 ZNF460Q14592 562 aa9.27□□□□□ -0.93
SMARCA1-202ENST00000371122 POLD3Q15054 466 aaPredicted RBP9.27□□□□□ -0.93
SMARCA1-202ENST00000371122 C16orf89Q6UX73 402 aa9.27□□□□□ -0.93
SMARCA1-202ENST00000371122 LINC00523Q86TU6 105 aa9.27□□□□□ -0.93
SMARCA1-202ENST00000371122 GSTCDQ8NEC7 633 aa9.27□□□□□ -0.93
SMARCA1-202ENST00000371122 RNF39Q9H2S5 420 aa9.27□□□□□ -0.93
SMARCA1-202ENST00000371122 VPS45Q9NRW7 570 aa9.27□□□□□ -0.93
SMARCA1-202ENST00000371122 LSM7Q9UK45 103 aaKnown RBP9.27□□□□□ -0.93
SMARCA1-202ENST00000371122 C15orf41Q9Y2V0 281 aa9.27□□□□□ -0.93
SMARCA1-202ENST00000371122 RPTORQ8N122 1335 aa9.27□□□□□ -0.93
SMARCA1-202ENST00000371122 MYO18AQ92614 2054 aaKnown RBP9.26□□□□□ -0.93
SMARCA1-202ENST00000371122 VNN1O95497 513 aa9.26□□□□□ -0.93
SMARCA1-202ENST00000371122 NUDT17P0C025 328 aa9.26□□□□□ -0.93
SMARCA1-202ENST00000371122 THRAP10827 490 aa9.26□□□□□ -0.93
SMARCA1-202ENST00000371122 IL1R2P27930 398 aa9.26□□□□□ -0.93
SMARCA1-202ENST00000371122 DSG1Q02413 1049 aa9.26□□□□□ -0.93
SMARCA1-202ENST00000371122 ACAP1Q15027 740 aa9.26□□□□□ -0.93
SMARCA1-202ENST00000371122 MAPRE2Q15555 327 aa9.26□□□□□ -0.93
SMARCA1-202ENST00000371122 CCDC142Q17RM4 750 aa9.26□□□□□ -0.93
SMARCA1-202ENST00000371122 TTC33Q6PID6 262 aaPredicted RBP9.26□□□□□ -0.93
SMARCA1-202ENST00000371122 CCDC185Q8N715 623 aa9.26□□□□□ -0.93
SMARCA1-202ENST00000371122 GFM2Q969S9 779 aaKnown RBP9.26□□□□□ -0.93
SMARCA1-202ENST00000371122 ZNF333Q96JL9 665 aa9.26□□□□□ -0.93
SMARCA1-202ENST00000371122 HAUS8Q9BT25 410 aa9.26□□□□□ -0.93
SMARCA1-202ENST00000371122 ASPSCR1Q9BZE9 553 aa9.26□□□□□ -0.93
SMARCA1-202ENST00000371122 POMKQ9H5K3 350 aa9.26□□□□□ -0.93
SMARCA1-202ENST00000371122 DHX33Q9H6R0 707 aaKnown RBP9.26□□□□□ -0.93
SMARCA1-202ENST00000371122 DMAP1Q9NPF5 467 aaPredicted RBP9.26□□□□□ -0.93
SMARCA1-202ENST00000371122 THAP1Q9NVV9 213 aa9.26□□□□□ -0.93
SMARCA1-202ENST00000371122 MARCH2Q9P0N8 246 aa9.26□□□□□ -0.93
SMARCA1-202ENST00000371122 ZNHIT2Q9UHR6 403 aa9.26□□□□□ -0.93
SMARCA1-202ENST00000371122 SOX13Q9UN79 622 aa9.26□□□□□ -0.93
SMARCA1-202ENST00000371122 A0A0A0MRY4 1105 aa9.26□□□□□ -0.93
SMARCA1-202ENST00000371122 FAM95CA0A1B0GW59 222 aa9.26□□□□□ -0.93
SMARCA1-202ENST00000371122 HEATR9A2RTY3 570 aa9.26□□□□□ -0.93
SMARCA1-202ENST00000371122 C2orf81A6NN90 581 aa9.26□□□□□ -0.93
SMARCA1-202ENST00000371122 ZNF197O14709 1029 aa9.26□□□□□ -0.93
SMARCA1-202ENST00000371122 DHX15O43143 795 aaKnown RBP9.26□□□□□ -0.93
SMARCA1-202ENST00000371122 DDHD2O94830 711 aa9.26□□□□□ -0.93
SMARCA1-202ENST00000371122 UNC5CO95185 931 aa9.26□□□□□ -0.93
SMARCA1-202ENST00000371122 ABL2P42684 1182 aa9.26□□□□□ -0.93
SMARCA1-202ENST00000371122 FCGRTP55899 365 aa9.26□□□□□ -0.93
SMARCA1-202ENST00000371122 NCALDP61601 193 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms