RNA–Protein interactions for RNA: ENST00000311550.9

GABRB3-202, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB3, Length 5,781 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-202ENST00000311550 SPIRE1Q08AE8 756 aa17.52■□□□□ 0.4
GABRB3-202ENST00000311550 VPS37AQ8NEZ2 397 aa17.52■□□□□ 0.4
GABRB3-202ENST00000311550 SERPINB11Q96P15 392 aa17.52■□□□□ 0.4
GABRB3-202ENST00000311550 NDNQ99608 321 aa17.52■□□□□ 0.4
GABRB3-202ENST00000311550 CAB39LQ9H9S4 337 aa17.52■□□□□ 0.4
GABRB3-202ENST00000311550 DDX28Q9NUL7 540 aaKnown RBP17.52■□□□□ 0.4
GABRB3-202ENST00000311550 DUOX1Q9NRD9 1551 aa17.52■□□□□ 0.4
GABRB3-202ENST00000311550 APOA1P02647 267 aa17.52■□□□□ 0.4
GABRB3-202ENST00000311550 TRAF2Q12933 501 aa17.52■□□□□ 0.4
GABRB3-202ENST00000311550 POLD3Q15054 466 aaPredicted RBP17.52■□□□□ 0.4
GABRB3-202ENST00000311550 TAF5Q15542 800 aa17.52■□□□□ 0.4
GABRB3-202ENST00000311550 LACTB2Q53H82 288 aaPredicted RBP17.52■□□□□ 0.4
GABRB3-202ENST00000311550 CLNKQ7Z7G1 428 aa17.52■□□□□ 0.4
GABRB3-202ENST00000311550 C12orf50Q8NA57 414 aaPredicted RBP17.52■□□□□ 0.4
GABRB3-202ENST00000311550 MPP4Q96JB8 637 aa17.52■□□□□ 0.4
GABRB3-202ENST00000311550 ELOVL4Q9GZR5 314 aa17.52■□□□□ 0.4
GABRB3-202ENST00000311550 LHX5Q9H2C1 402 aa17.52■□□□□ 0.4
GABRB3-202ENST00000311550 AP4S1Q9Y587 144 aa17.52■□□□□ 0.4
GABRB3-202ENST00000311550 PARNO95453 639 aaKnown RBP17.52■□□□□ 0.39
GABRB3-202ENST00000311550 USP4Q13107 963 aa17.52■□□□□ 0.39
GABRB3-202ENST00000311550 ADRM1Q16186 407 aa17.52■□□□□ 0.39
GABRB3-202ENST00000311550 FNDC5Q8NAU1 212 aa17.52■□□□□ 0.39
GABRB3-202ENST00000311550 TFAP2BQ92481 460 aa17.52■□□□□ 0.39
GABRB3-202ENST00000311550 MORF4L1Q9UBU8 362 aa17.52■□□□□ 0.39
GABRB3-202ENST00000311550 ZNF682O95780 498 aa17.51■□□□□ 0.39
GABRB3-202ENST00000311550 SLC2A4P14672 509 aa17.51■□□□□ 0.39
GABRB3-202ENST00000311550 TSPAN8P19075 237 aa17.51■□□□□ 0.39
GABRB3-202ENST00000311550 EPHA3P29320 983 aa17.51■□□□□ 0.39
GABRB3-202ENST00000311550 DNAJC14Q6Y2X3 702 aaPredicted RBP17.51■□□□□ 0.39
GABRB3-202ENST00000311550 ARCQ7LC44 396 aa17.51■□□□□ 0.39
GABRB3-202ENST00000311550 MIEF2Q96C03 454 aa17.51■□□□□ 0.39
GABRB3-202ENST00000311550 PDGFDQ9GZP0 370 aaPredicted RBP17.51■□□□□ 0.39
GABRB3-202ENST00000311550 NMUR2Q9GZQ4 415 aa17.51■□□□□ 0.39
GABRB3-202ENST00000311550 FAM50BQ9Y247 325 aa17.51■□□□□ 0.39
GABRB3-202ENST00000311550 CKMP06732 381 aa17.51■□□□□ 0.39
GABRB3-202ENST00000311550 ANPEPP15144 967 aa17.51■□□□□ 0.39
GABRB3-202ENST00000311550 GBE1Q04446 702 aa17.51■□□□□ 0.39
GABRB3-202ENST00000311550 BNIP1Q12981 228 aa17.51■□□□□ 0.39
GABRB3-202ENST00000311550 ZC3H12BQ5HYM0 836 aaKnown RBP17.51■□□□□ 0.39
GABRB3-202ENST00000311550 PCID2Q5JVF3 399 aa17.51■□□□□ 0.39
GABRB3-202ENST00000311550 PACS1Q6VY07 963 aa17.51■□□□□ 0.39
GABRB3-202ENST00000311550 C18orf25Q96B23 403 aaPredicted RBP17.51■□□□□ 0.39
GABRB3-202ENST00000311550 TLR8Q9NR97 1041 aaKnown RBP17.51■□□□□ 0.39
GABRB3-202ENST00000311550 SNX15Q9NRS6 342 aa17.51■□□□□ 0.39
GABRB3-202ENST00000311550 CCNT2O60583 730 aaKnown RBP17.51■□□□□ 0.39
GABRB3-202ENST00000311550 ITGALP20701 1170 aa17.51■□□□□ 0.39
GABRB3-202ENST00000311550 SKIV2L2P42285 1042 aaKnown RBP17.51■□□□□ 0.39
GABRB3-202ENST00000311550 RIN3Q8TB24 985 aa17.51■□□□□ 0.39
GABRB3-202ENST00000311550 SLC44A1Q8WWI5 657 aa17.51■□□□□ 0.39
GABRB3-202ENST00000311550 UBXN6Q9BZV1 441 aa17.51■□□□□ 0.39
GABRB3-202ENST00000311550 PCDHB5Q9Y5E4 795 aa17.51■□□□□ 0.39
GABRB3-202ENST00000311550 CCDC166P0CW27 439 aa17.51■□□□□ 0.39
GABRB3-202ENST00000311550 FMO4P31512 558 aa17.51■□□□□ 0.39
GABRB3-202ENST00000311550 CTBP1Q13363 440 aa17.51■□□□□ 0.39
GABRB3-202ENST00000311550 LPCAT2Q7L5N7 544 aa17.51■□□□□ 0.39
GABRB3-202ENST00000311550 ULK2Q8IYT8 1036 aa17.51■□□□□ 0.39
GABRB3-202ENST00000311550 P2RY11Q96G91 374 aa17.51■□□□□ 0.39
GABRB3-202ENST00000311550 ACE2Q9BYF1 805 aaPredicted RBP17.51■□□□□ 0.39
GABRB3-202ENST00000311550 ENTPD7Q9NQZ7 604 aa17.51■□□□□ 0.39
GABRB3-202ENST00000311550 SMPD4Q9NXE4 827 aa17.51■□□□□ 0.39
GABRB3-202ENST00000311550 TRPM5Q9NZQ8 1165 aa17.51■□□□□ 0.39
GABRB3-202ENST00000311550 KANSL1LA0AUZ9 987 aa17.51■□□□□ 0.39
GABRB3-202ENST00000311550 CYP1A1P04798 512 aaPredicted RBP17.51■□□□□ 0.39
GABRB3-202ENST00000311550 TAF2Q6P1X5 1199 aa17.51■□□□□ 0.39
GABRB3-202ENST00000311550 FIG4Q92562 907 aa17.51■□□□□ 0.39
GABRB3-202ENST00000311550 NDRG1Q92597 394 aaKnown RBP17.51■□□□□ 0.39
GABRB3-202ENST00000311550 NKD2Q969F2 451 aaPredicted RBP17.51■□□□□ 0.39
GABRB3-202ENST00000311550 ADGRE3Q9BY15 652 aa17.51■□□□□ 0.39
GABRB3-202ENST00000311550 XPNPEP1Q9NQW7 623 aa17.51■□□□□ 0.39
GABRB3-202ENST00000311550 RNASEH2BQ5TBB1 312 aaKnown RBP17.5■□□□□ 0.39
GABRB3-202ENST00000311550 CYP4X1Q8N118 509 aa17.5■□□□□ 0.39
GABRB3-202ENST00000311550 TMEM109Q9BVC6 243 aa17.5■□□□□ 0.39
GABRB3-202ENST00000311550 NXF3Q9H4D5 531 aaKnown RBP17.5■□□□□ 0.39
GABRB3-202ENST00000311550 ATP13A1Q9HD20 1204 aa17.5■□□□□ 0.39
GABRB3-202ENST00000311550 ACSS2Q9NR19 701 aa17.5■□□□□ 0.39
GABRB3-202ENST00000311550 ZDHHC18Q9NUE0 388 aa17.5■□□□□ 0.39
GABRB3-202ENST00000311550 S100A5P33763 92 aa17.5■□□□□ 0.39
GABRB3-202ENST00000311550 MATKP42679 507 aa17.5■□□□□ 0.39
GABRB3-202ENST00000311550 SERPINH1P50454 418 aaKnown RBP17.5■□□□□ 0.39
GABRB3-202ENST00000311550 MAP3K10Q02779 954 aa17.5■□□□□ 0.39
GABRB3-202ENST00000311550 FAM171A1Q5VUB5 890 aa17.5■□□□□ 0.39
GABRB3-202ENST00000311550 RMND5BQ96G75 393 aaPredicted RBP17.5■□□□□ 0.39
GABRB3-202ENST00000311550 TMEM169Q96HH4 297 aa17.5■□□□□ 0.39
GABRB3-202ENST00000311550 FBXO44Q9H4M3 255 aa17.5■□□□□ 0.39
GABRB3-202ENST00000311550 TAS2R13Q9NYV9 303 aa17.5■□□□□ 0.39
GABRB3-202ENST00000311550 TUBGCP4Q9UGJ1 667 aa17.5■□□□□ 0.39
GABRB3-202ENST00000311550 SORCS3Q9UPU3 1222 aa17.5■□□□□ 0.39
GABRB3-202ENST00000311550 BTN3A1O00481 513 aa17.5■□□□□ 0.39
GABRB3-202ENST00000311550 B4GALT4O60513 344 aa17.5■□□□□ 0.39
GABRB3-202ENST00000311550 SERPINA6P08185 405 aa17.5■□□□□ 0.39
GABRB3-202ENST00000311550 SMIM10L2AP0DMW4 78 aa17.5■□□□□ 0.39
GABRB3-202ENST00000311550 SMIM10L2BP0DMW5 78 aa17.5■□□□□ 0.39
GABRB3-202ENST00000311550 ANKS6Q68DC2 871 aa17.5■□□□□ 0.39
GABRB3-202ENST00000311550 LRRC8DQ7L1W4 858 aa17.5■□□□□ 0.39
GABRB3-202ENST00000311550 LPPQ93052 612 aa17.5■□□□□ 0.39
GABRB3-202ENST00000311550 DCUN1D5Q9BTE7 237 aa17.5■□□□□ 0.39
GABRB3-202ENST00000311550 GOLGA2P5Q9HBQ8 144 aa17.5■□□□□ 0.39
GABRB3-202ENST00000311550 PSMD12O00232 456 aaPredicted RBP17.5■□□□□ 0.39
GABRB3-202ENST00000311550 DAB1O75553 588 aa17.5■□□□□ 0.39
GABRB3-202ENST00000311550 CCNB1P14635 433 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms