RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 CASTOR2A6NHX0 329 aa16.74■□□□□ 0.27
SH3RF1-201ENST00000284637 ADRB2P07550 413 aa16.74■□□□□ 0.27
SH3RF1-201ENST00000284637 ALOX12P18054 663 aa16.74■□□□□ 0.27
SH3RF1-201ENST00000284637 RHOAP61586 193 aa16.74■□□□□ 0.27
SH3RF1-201ENST00000284637 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.74■□□□□ 0.27
SH3RF1-201ENST00000284637 YAF2Q8IY57 180 aa16.74■□□□□ 0.27
SH3RF1-201ENST00000284637 SLC2A14Q8TDB8 520 aa16.74■□□□□ 0.27
SH3RF1-201ENST00000284637 ALG3Q92685 438 aa16.74■□□□□ 0.27
SH3RF1-201ENST00000284637 MAN1C1Q9NR34 630 aa16.74■□□□□ 0.27
SH3RF1-201ENST00000284637 LACTBL1A8MY62 500 aa16.73■□□□□ 0.27
SH3RF1-201ENST00000284637 PSMD12O00232 456 aaPredicted RBP16.73■□□□□ 0.27
SH3RF1-201ENST00000284637 WNT7AO00755 349 aa16.73■□□□□ 0.27
SH3RF1-201ENST00000284637 ABCB1P08183 1280 aaPredicted RBP16.73■□□□□ 0.27
SH3RF1-201ENST00000284637 PCNAP12004 261 aa16.73■□□□□ 0.27
SH3RF1-201ENST00000284637 CNPY1Q3B7I2 92 aa16.73■□□□□ 0.27
SH3RF1-201ENST00000284637 SPANXN2Q5MJ10 180 aa16.73■□□□□ 0.27
SH3RF1-201ENST00000284637 CAMK1DQ8IU85 385 aa16.73■□□□□ 0.27
SH3RF1-201ENST00000284637 C19orf18Q8NEA5 215 aa16.73■□□□□ 0.27
SH3RF1-201ENST00000284637 TBCDQ9BTW9 1192 aa16.73■□□□□ 0.27
SH3RF1-201ENST00000284637 TRNAU1APQ9NX07 287 aaKnown RBP16.73■□□□□ 0.27
SH3RF1-201ENST00000284637 CNTNAP2Q9UHC6 1331 aa16.73■□□□□ 0.27
SH3RF1-201ENST00000284637 SERPINF2P08697 491 aa16.73■□□□□ 0.27
SH3RF1-201ENST00000284637 ZNF286BP0CG31 522 aa16.73■□□□□ 0.27
SH3RF1-201ENST00000284637 PBLDP30039 288 aaPredicted RBP16.73■□□□□ 0.27
SH3RF1-201ENST00000284637 LHX1P48742 406 aa16.73■□□□□ 0.27
SH3RF1-201ENST00000284637 FRG1Q14331 258 aaKnown RBP16.73■□□□□ 0.27
SH3RF1-201ENST00000284637 IRF2BP2Q7Z5L9 587 aa16.73■□□□□ 0.27
SH3RF1-201ENST00000284637 FGD2Q7Z6J4 655 aa16.73■□□□□ 0.27
SH3RF1-201ENST00000284637 ZDHHC13Q8IUH4 622 aa16.73■□□□□ 0.27
SH3RF1-201ENST00000284637 ALLCQ8N6M5 410 aa16.73■□□□□ 0.27
SH3RF1-201ENST00000284637 SYT15Q9BQS2 421 aa16.73■□□□□ 0.27
SH3RF1-201ENST00000284637 ARHGEF3Q9NR81 526 aa16.73■□□□□ 0.27
SH3RF1-201ENST00000284637 DUSP12Q9UNI6 340 aa16.73■□□□□ 0.27
SH3RF1-201ENST00000284637 MEGF6O75095 1541 aa16.73■□□□□ 0.27
SH3RF1-201ENST00000284637 NCANO14594 1321 aa16.73■□□□□ 0.27
SH3RF1-201ENST00000284637 WTIPA6NIX2 430 aaPredicted RBP16.73■□□□□ 0.27
SH3RF1-201ENST00000284637 BTNL10A8MVZ5 291 aa16.73■□□□□ 0.27
SH3RF1-201ENST00000284637 MAP3K13O43283 966 aa16.73■□□□□ 0.27
SH3RF1-201ENST00000284637 RHOCP08134 193 aa16.73■□□□□ 0.27
SH3RF1-201ENST00000284637 IL1R1P14778 569 aa16.73■□□□□ 0.27
SH3RF1-201ENST00000284637 NUDT18Q6ZVK8 323 aa16.73■□□□□ 0.27
SH3RF1-201ENST00000284637 ECHDC2Q86YB7 292 aa16.73■□□□□ 0.27
SH3RF1-201ENST00000284637 ITFG1Q8TB96 612 aa16.73■□□□□ 0.27
SH3RF1-201ENST00000284637 MAGEE2Q8TD90 523 aaPredicted RBP16.73■□□□□ 0.27
SH3RF1-201ENST00000284637 ZFP42Q96MM3 310 aa16.73■□□□□ 0.27
SH3RF1-201ENST00000284637 TRIM39Q9HCM9 518 aa16.73■□□□□ 0.27
SH3RF1-201ENST00000284637 SH3BP4Q9P0V3 963 aa16.73■□□□□ 0.27
SH3RF1-201ENST00000284637 SLC12A4Q9UP95 1085 aa16.73■□□□□ 0.27
SH3RF1-201ENST00000284637 ANKRD6Q9Y2G4 727 aa16.73■□□□□ 0.27
SH3RF1-201ENST00000284637 CRYL1Q9Y2S2 319 aa16.73■□□□□ 0.27
SH3RF1-201ENST00000284637 SLIT1O75093 1534 aa16.73■□□□□ 0.27
SH3RF1-201ENST00000284637 TCF3P15923 654 aa16.73■□□□□ 0.27
SH3RF1-201ENST00000284637 DPEP1P16444 411 aa16.73■□□□□ 0.27
SH3RF1-201ENST00000284637 YBX3P16989 372 aaKnown RBP eCLIP16.73■□□□□ 0.27
SH3RF1-201ENST00000284637 FAM71AQ8IYT1 594 aa16.73■□□□□ 0.27
SH3RF1-201ENST00000284637 ANKRD13AQ8IZ07 590 aa16.73■□□□□ 0.27
SH3RF1-201ENST00000284637 OR52K1Q8NGK4 314 aa16.73■□□□□ 0.27
SH3RF1-201ENST00000284637 ZMYM5Q9UJ78 669 aa16.73■□□□□ 0.27
SH3RF1-201ENST00000284637 TRHDEQ9UKU6 1024 aa16.73■□□□□ 0.27
SH3RF1-201ENST00000284637 KLHL20Q9Y2M5 609 aa16.73■□□□□ 0.27
SH3RF1-201ENST00000284637 SEC22BO75396 215 aa16.72■□□□□ 0.27
SH3RF1-201ENST00000284637 KRT6AP02538 564 aa16.72■□□□□ 0.27
SH3RF1-201ENST00000284637 KRT6BP04259 564 aa16.72■□□□□ 0.27
SH3RF1-201ENST00000284637 ITGA2BP08514 1039 aa16.72■□□□□ 0.27
SH3RF1-201ENST00000284637 KRT6CP48668 564 aa16.72■□□□□ 0.27
SH3RF1-201ENST00000284637 FMO1Q01740 532 aa16.72■□□□□ 0.27
SH3RF1-201ENST00000284637 C1DQ13901 141 aaKnown RBP16.72■□□□□ 0.27
SH3RF1-201ENST00000284637 CCDC149Q6ZUS6 474 aa16.72■□□□□ 0.27
SH3RF1-201ENST00000284637 SAMD3Q8N6K7 520 aa16.72■□□□□ 0.27
SH3RF1-201ENST00000284637 LRRN4Q8WUT4 740 aa16.72■□□□□ 0.27
SH3RF1-201ENST00000284637 S100ZQ8WXG8 99 aa16.72■□□□□ 0.27
SH3RF1-201ENST00000284637 TPD52L3Q96J77 140 aa16.72■□□□□ 0.27
SH3RF1-201ENST00000284637 APOL4Q9BPW4 351 aa16.72■□□□□ 0.27
SH3RF1-201ENST00000284637 PRKD2Q9BZL6 878 aa16.72■□□□□ 0.27
SH3RF1-201ENST00000284637 PADI4Q9UM07 663 aa16.72■□□□□ 0.27
SH3RF1-201ENST00000284637 A0A1W2PPM1 405 aa16.72■□□□□ 0.27
SH3RF1-201ENST00000284637 PIPSLA2A3N6 862 aa16.72■□□□□ 0.27
SH3RF1-201ENST00000284637 TMEM114B3SHH9 223 aa16.72■□□□□ 0.27
SH3RF1-201ENST00000284637 CCNA2P20248 432 aa16.72■□□□□ 0.27
SH3RF1-201ENST00000284637 GLRA2P23416 452 aa16.72■□□□□ 0.27
SH3RF1-201ENST00000284637 KRT20P35900 424 aa16.72■□□□□ 0.27
SH3RF1-201ENST00000284637 GRIA3P42263 894 aa16.72■□□□□ 0.27
SH3RF1-201ENST00000284637 TUBP50607 506 aa16.72■□□□□ 0.27
SH3RF1-201ENST00000284637 DGKKQ5KSL6 1271 aa16.72■□□□□ 0.27
SH3RF1-201ENST00000284637 ZNF614Q8N883 585 aa16.72■□□□□ 0.27
SH3RF1-201ENST00000284637 HPS1Q92902 700 aa16.72■□□□□ 0.27
SH3RF1-201ENST00000284637 POLR1BQ9H9Y6 1135 aa16.72■□□□□ 0.27
SH3RF1-201ENST00000284637 BTBD3Q9Y2F9 522 aa16.72■□□□□ 0.27
SH3RF1-201ENST00000284637 TRIM43BA6NCK2 446 aa16.72■□□□□ 0.27
SH3RF1-201ENST00000284637 MYL4P12829 197 aa16.72■□□□□ 0.27
SH3RF1-201ENST00000284637 COX4I1P13073 169 aa16.72■□□□□ 0.27
SH3RF1-201ENST00000284637 ACVR2BQ13705 512 aa16.72■□□□□ 0.27
SH3RF1-201ENST00000284637 CLNKQ7Z7G1 428 aa16.72■□□□□ 0.27
SH3RF1-201ENST00000284637 ALYREFQ86V81 257 aaKnown RBP16.72■□□□□ 0.27
SH3RF1-201ENST00000284637 KLHL3Q9UH77 587 aa16.72■□□□□ 0.27
SH3RF1-201ENST00000284637 DOLKQ9UPQ8 538 aa16.72■□□□□ 0.27
SH3RF1-201ENST00000284637 COL3A1P02461 1466 aaPredicted RBP16.72■□□□□ 0.27
SH3RF1-201ENST00000284637 DIP2AQ14689 1571 aa16.72■□□□□ 0.27
SH3RF1-201ENST00000284637 CHADO15335 359 aa16.72■□□□□ 0.27
SH3RF1-201ENST00000284637 PSMB4P28070 264 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms