RNA–Protein interactions for RNA: ENST00000231656.12

CDX1-201, Transcript of caudal type homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-201ENST00000231656 LRRC3Q9BY71 257 aa23.19■■□□□ 1.3
CDX1-201ENST00000231656 OSBPL2Q9H1P3 480 aa23.19■■□□□ 1.3
CDX1-201ENST00000231656 OR12D3Q9UGF7 316 aa23.19■■□□□ 1.3
CDX1-201ENST00000231656 HCFC2Q9Y5Z7 792 aa23.19■■□□□ 1.3
CDX1-201ENST00000231656 RASA4BC9J798 803 aa23.18■■□□□ 1.3
CDX1-201ENST00000231656 RFXAPO00287 272 aa23.18■■□□□ 1.3
CDX1-201ENST00000231656 RASA4O43374 803 aa23.18■■□□□ 1.3
CDX1-201ENST00000231656 OPHN1O60890 802 aa23.18■■□□□ 1.3
CDX1-201ENST00000231656 SPAG6O75602 509 aa23.18■■□□□ 1.3
CDX1-201ENST00000231656 ATP5C1P36542 298 aaKnown RBP23.18■■□□□ 1.3
CDX1-201ENST00000231656 FDFT1P37268 417 aa23.18■■□□□ 1.3
CDX1-201ENST00000231656 TUBP50607 506 aa23.18■■□□□ 1.3
CDX1-201ENST00000231656 TBX4P57082 545 aa23.18■■□□□ 1.3
CDX1-201ENST00000231656 PABPC1LQ4VXU2 614 aaKnown RBP23.18■■□□□ 1.3
CDX1-201ENST00000231656 KLHDC10Q6PID8 442 aa23.18■■□□□ 1.3
CDX1-201ENST00000231656 HS6ST3Q8IZP7 471 aa23.18■■□□□ 1.3
CDX1-201ENST00000231656 NPWQ8N729 165 aa23.18■■□□□ 1.3
CDX1-201ENST00000231656 FCRL2Q96LA5 508 aaPredicted RBP23.18■■□□□ 1.3
CDX1-201ENST00000231656 ZNF317Q96PQ6 595 aaPredicted RBP23.18■■□□□ 1.3
CDX1-201ENST00000231656 TLE6Q9H808 572 aa23.18■■□□□ 1.3
CDX1-201ENST00000231656 DNMT3LQ9UJW3 386 aa23.18■■□□□ 1.3
CDX1-201ENST00000231656 KCNU1A8MYU2 1149 aa23.17■■□□□ 1.3
CDX1-201ENST00000231656 COCHO43405 550 aa23.17■■□□□ 1.3
CDX1-201ENST00000231656 STK10O94804 968 aaKnown RBP23.17■■□□□ 1.3
CDX1-201ENST00000231656 LRIG2O94898 1065 aa23.17■■□□□ 1.3
CDX1-201ENST00000231656 GABRR2P28476 465 aa23.17■■□□□ 1.3
CDX1-201ENST00000231656 TRIP4Q15650 581 aaPredicted RBP23.17■■□□□ 1.3
CDX1-201ENST00000231656 PRMT1Q99873 361 aaKnown RBP23.17■■□□□ 1.3
CDX1-201ENST00000231656 KCNK9Q9NPC2 374 aa23.17■■□□□ 1.3
CDX1-201ENST00000231656 TCRBV9S1A1TA0A576 114 aa23.17■■□□□ 1.3
CDX1-201ENST00000231656 C2orf78A6NCI8 922 aa23.17■■□□□ 1.3
CDX1-201ENST00000231656 ZNF189O75820 626 aaPredicted RBP23.17■■□□□ 1.3
CDX1-201ENST00000231656 OAS1P00973 400 aaKnown RBP23.17■■□□□ 1.3
CDX1-201ENST00000231656 DRD4P21917 467 aa23.17■■□□□ 1.3
CDX1-201ENST00000231656 HOXA9P31269 272 aa23.17■■□□□ 1.3
CDX1-201ENST00000231656 ADGRD1Q6QNK2 874 aa23.17■■□□□ 1.3
CDX1-201ENST00000231656 GAREM2Q75VX8 874 aa23.17■■□□□ 1.3
CDX1-201ENST00000231656 CCNYQ8ND76 341 aa23.17■■□□□ 1.3
CDX1-201ENST00000231656 LRRC39Q96DD0 335 aa23.17■■□□□ 1.3
CDX1-201ENST00000231656 PAFAH2Q99487 392 aa23.17■■□□□ 1.3
CDX1-201ENST00000231656 FERMT1Q9BQL6 677 aa23.17■■□□□ 1.3
CDX1-201ENST00000231656 NACA2Q9H009 215 aa23.17■■□□□ 1.3
CDX1-201ENST00000231656 PLAC1Q9HBJ0 212 aa23.17■■□□□ 1.3
CDX1-201ENST00000231656 NEU3Q9UQ49 428 aa23.17■■□□□ 1.3
CDX1-201ENST00000231656 SLC12A8A0AV02 714 aa23.16■■□□□ 1.3
CDX1-201ENST00000231656 SLC2A3P11169 496 aa23.16■■□□□ 1.3
CDX1-201ENST00000231656 DCAKDQ8WVC6 231 aa23.16■■□□□ 1.3
CDX1-201ENST00000231656 MRRFQ96E11 262 aaKnown RBP23.16■■□□□ 1.3
CDX1-201ENST00000231656 CHMP6Q96FZ7 201 aa23.16■■□□□ 1.3
CDX1-201ENST00000231656 HAPLN3Q96S86 360 aa23.16■■□□□ 1.3
CDX1-201ENST00000231656 CYTH2Q99418 400 aa23.16■■□□□ 1.3
CDX1-201ENST00000231656 CORO1BQ9BR76 489 aa23.16■■□□□ 1.3
CDX1-201ENST00000231656 FAM107BQ9H098 131 aa23.16■■□□□ 1.3
CDX1-201ENST00000231656 XAB2Q9HCS7 855 aaKnown RBP23.16■■□□□ 1.3
CDX1-201ENST00000231656 EIF2B3Q9NR50 452 aaKnown RBP23.16■■□□□ 1.3
CDX1-201ENST00000231656 SENP1Q9P0U3 644 aa23.16■■□□□ 1.3
CDX1-201ENST00000231656 DPP7Q9UHL4 492 aa23.16■■□□□ 1.3
CDX1-201ENST00000231656 REV3LO60673 3130 aa23.16■■□□□ 1.3
CDX1-201ENST00000231656 NUP205Q92621 2012 aa23.15■■□□□ 1.3
CDX1-201ENST00000231656 EBAG9O00559 213 aa23.15■■□□□ 1.3
CDX1-201ENST00000231656 NCAM2O15394 837 aa23.15■■□□□ 1.3
CDX1-201ENST00000231656 PAGE1O75459 146 aa23.15■■□□□ 1.3
CDX1-201ENST00000231656 IGLV3-27P01718 113 aa23.15■■□□□ 1.3
CDX1-201ENST00000231656 C1QAP02745 245 aa23.15■■□□□ 1.3
CDX1-201ENST00000231656 HNRNPA1P09651 372 aaKnown RBP eCLIP23.15■■□□□ 1.3
CDX1-201ENST00000231656 NRIP1P48552 1158 aa23.15■■□□□ 1.3
CDX1-201ENST00000231656 CDK16Q00536 496 aa23.15■■□□□ 1.3
CDX1-201ENST00000231656 PPIDQ08752 370 aaKnown RBP23.15■■□□□ 1.3
CDX1-201ENST00000231656 GALNT2Q10471 571 aa23.15■■□□□ 1.3
CDX1-201ENST00000231656 QPCTQ16769 361 aa23.15■■□□□ 1.3
CDX1-201ENST00000231656 DUSP6Q16828 381 aa23.15■■□□□ 1.3
CDX1-201ENST00000231656 ZNF567Q8N184 647 aa23.15■■□□□ 1.3
CDX1-201ENST00000231656 MRPL38Q96DV4 380 aaKnown RBP23.15■■□□□ 1.3
CDX1-201ENST00000231656 SIGLEC10Q96LC7 697 aa23.15■■□□□ 1.3
CDX1-201ENST00000231656 RNF38Q9H0F5 515 aa23.15■■□□□ 1.3
CDX1-201ENST00000231656 TRABDQ9H4I3 376 aa23.15■■□□□ 1.3
CDX1-201ENST00000231656 ASAH2Q9NR71 780 aa23.15■■□□□ 1.3
CDX1-201ENST00000231656 HCFC1R1Q9NWW0 138 aa23.15■■□□□ 1.3
CDX1-201ENST00000231656 TTLL3Q9Y4R7 772 aa23.15■■□□□ 1.3
CDX1-201ENST00000231656 SHROOM3Q8TF72 1996 aa23.14■■□□□ 1.3
CDX1-201ENST00000231656 MOCS2O96007 188 aaPredicted RBP23.14■■□□□ 1.3
CDX1-201ENST00000231656 HMBSP08397 361 aa23.14■■□□□ 1.3
CDX1-201ENST00000231656 EPHB2P29323 1055 aa23.14■■□□□ 1.3
CDX1-201ENST00000231656 KPNA1P52294 538 aaPredicted RBP23.14■■□□□ 1.3
CDX1-201ENST00000231656 RING1Q06587 406 aa23.14■■□□□ 1.3
CDX1-201ENST00000231656 ANKRD42Q8N9B4 389 aa23.14■■□□□ 1.3
CDX1-201ENST00000231656 MGARPQ8TDB4 240 aa23.14■■□□□ 1.3
CDX1-201ENST00000231656 MZB1Q8WU39 189 aa23.14■■□□□ 1.3
CDX1-201ENST00000231656 CFAP36Q96G28 342 aa23.14■■□□□ 1.3
CDX1-201ENST00000231656 CEP41Q9BYV8 373 aa23.14■■□□□ 1.3
CDX1-201ENST00000231656 BRD8Q9H0E9 1235 aa23.14■■□□□ 1.3
CDX1-201ENST00000231656 SEPT10Q9P0V9 454 aa23.14■■□□□ 1.3
CDX1-201ENST00000231656 IGSF9Q9P2J2 1179 aa23.14■■□□□ 1.3
CDX1-201ENST00000231656 ZC3H7BQ9UGR2 993 aaKnown RBP23.14■■□□□ 1.3
CDX1-201ENST00000231656 HBS1LQ9Y450 684 aaKnown RBP23.14■■□□□ 1.3
CDX1-201ENST00000231656 SZT2Q5T011 3432 aa23.14■■□□□ 1.3
CDX1-201ENST00000231656 PIAS1O75925 651 aa23.14■■□□□ 1.29
CDX1-201ENST00000231656 KRT15P19012 456 aa23.14■■□□□ 1.29
CDX1-201ENST00000231656 GRIA1P42261 906 aa23.14■■□□□ 1.29
CDX1-201ENST00000231656 MSH2P43246 934 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 165.6 ms