RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 XYLBO75191 536 aa17.72■□□□□ 0.43
PHGDH-234ENST00000642041 BEST1O76090 585 aa17.72■□□□□ 0.43
PHGDH-234ENST00000642041 STK10O94804 968 aaKnown RBP17.72■□□□□ 0.43
PHGDH-234ENST00000642041 KRT10P13645 584 aa17.72■□□□□ 0.43
PHGDH-234ENST00000642041 RPL17P18621 184 aaKnown RBP17.72■□□□□ 0.43
PHGDH-234ENST00000642041 L1CAMP32004 1257 aa17.72■□□□□ 0.43
PHGDH-234ENST00000642041 SERPINB6P35237 376 aa17.72■□□□□ 0.43
PHGDH-234ENST00000642041 ADRA1BP35368 520 aa17.72■□□□□ 0.43
PHGDH-234ENST00000642041 PPP3CCP48454 512 aa17.72■□□□□ 0.43
PHGDH-234ENST00000642041 EIF3EP60228 445 aaKnown RBP17.72■□□□□ 0.43
PHGDH-234ENST00000642041 SNX1Q13596 522 aa17.72■□□□□ 0.43
PHGDH-234ENST00000642041 PSMD5Q16401 504 aa17.72■□□□□ 0.43
PHGDH-234ENST00000642041 SMTNL2Q2TAL5 461 aa17.72■□□□□ 0.43
PHGDH-234ENST00000642041 SLC39A12Q504Y0 691 aa17.72■□□□□ 0.43
PHGDH-234ENST00000642041 RTP2Q5QGT7 225 aa17.72■□□□□ 0.43
PHGDH-234ENST00000642041 PPM1LQ5SGD2 360 aa17.72■□□□□ 0.43
PHGDH-234ENST00000642041 BSPRYQ5W0U4 402 aa17.72■□□□□ 0.43
PHGDH-234ENST00000642041 PSAPL1Q6NUJ1 521 aa17.72■□□□□ 0.43
PHGDH-234ENST00000642041 CPNE8Q86YQ8 564 aa17.72■□□□□ 0.43
PHGDH-234ENST00000642041 LRRC49Q8IUZ0 686 aa17.72■□□□□ 0.43
PHGDH-234ENST00000642041 IQCKQ8N0W5 287 aa17.72■□□□□ 0.43
PHGDH-234ENST00000642041 PDZD8Q8NEN9 1154 aa17.72■□□□□ 0.43
PHGDH-234ENST00000642041 OR10T2Q8NGX3 314 aa17.72■□□□□ 0.43
PHGDH-234ENST00000642041 ACTL9Q8TC94 416 aa17.72■□□□□ 0.43
PHGDH-234ENST00000642041 TTC25Q96NG3 672 aa17.72■□□□□ 0.43
PHGDH-234ENST00000642041 SERPINB11Q96P15 392 aa17.72■□□□□ 0.43
PHGDH-234ENST00000642041 HAPLN3Q96S86 360 aa17.72■□□□□ 0.43
PHGDH-234ENST00000642041 EPAS1Q99814 870 aa17.72■□□□□ 0.43
PHGDH-234ENST00000642041 CCDC77Q9BR77 488 aa17.72■□□□□ 0.43
PHGDH-234ENST00000642041 ADAM33Q9BZ11 813 aa17.72■□□□□ 0.43
PHGDH-234ENST00000642041 OSBPL2Q9H1P3 480 aa17.72■□□□□ 0.43
PHGDH-234ENST00000642041 DPH5Q9H2P9 285 aa17.72■□□□□ 0.43
PHGDH-234ENST00000642041 PABPC3Q9H361 631 aaKnown RBP17.72■□□□□ 0.43
PHGDH-234ENST00000642041 PAK5Q9P286 719 aa17.72■□□□□ 0.43
PHGDH-234ENST00000642041 MTRRQ9UBK8 725 aa17.72■□□□□ 0.43
PHGDH-234ENST00000642041 TPX2Q9ULW0 747 aaKnown RBP17.72■□□□□ 0.43
PHGDH-234ENST00000642041 SHOC2Q9UQ13 582 aa17.72■□□□□ 0.43
PHGDH-234ENST00000642041 NOTCH4Q99466 2003 aa17.72■□□□□ 0.43
PHGDH-234ENST00000642041 AKAP13Q12802 2813 aa17.71■□□□□ 0.43
PHGDH-234ENST00000642041 SPAG17Q6Q759 2223 aa17.71■□□□□ 0.43
PHGDH-234ENST00000642041 SGK1O00141 431 aa17.71■□□□□ 0.43
PHGDH-234ENST00000642041 PIK3R2O00459 728 aa17.71■□□□□ 0.43
PHGDH-234ENST00000642041 CCL16O15467 120 aa17.71■□□□□ 0.43
PHGDH-234ENST00000642041 POU2F2P09086 479 aa17.71■□□□□ 0.43
PHGDH-234ENST00000642041 MYBL2P10244 700 aa17.71■□□□□ 0.43
PHGDH-234ENST00000642041 RBP3P10745 1247 aa17.71■□□□□ 0.43
PHGDH-234ENST00000642041 CPB1P15086 417 aa17.71■□□□□ 0.43
PHGDH-234ENST00000642041 MX2P20592 715 aa17.71■□□□□ 0.43
PHGDH-234ENST00000642041 RPL21P46778 160 aaKnown RBP17.71■□□□□ 0.43
PHGDH-234ENST00000642041 CXCR3P49682 368 aa17.71■□□□□ 0.43
PHGDH-234ENST00000642041 CDR1P51861 262 aa17.71■□□□□ 0.43
PHGDH-234ENST00000642041 PMS2P54278 862 aa17.71■□□□□ 0.43
PHGDH-234ENST00000642041 YWHAGP61981 247 aaKnown RBP eCLIP17.71■□□□□ 0.43
PHGDH-234ENST00000642041 OTUD4Q01804 1114 aaKnown RBP17.71■□□□□ 0.43
PHGDH-234ENST00000642041 ROR1Q01973 937 aa17.71■□□□□ 0.43
PHGDH-234ENST00000642041 DHX9Q08211 1270 aaKnown RBP17.71■□□□□ 0.43
PHGDH-234ENST00000642041 CBLBQ13191 982 aa17.71■□□□□ 0.43
PHGDH-234ENST00000642041 SLC8B1Q6J4K2 584 aa17.71■□□□□ 0.43
PHGDH-234ENST00000642041 TRNP1Q6NT89 227 aa17.71■□□□□ 0.43
PHGDH-234ENST00000642041 CEP68Q76N32 757 aa17.71■□□□□ 0.43
PHGDH-234ENST00000642041 LZTR1Q8N653 840 aa17.71■□□□□ 0.43
PHGDH-234ENST00000642041 KCNK16Q96T55 309 aa17.71■□□□□ 0.43
PHGDH-234ENST00000642041 ROPN1BQ9BZX4 212 aaPredicted RBP17.71■□□□□ 0.43
PHGDH-234ENST00000642041 ARRDC1-AS1Q9H2J1 176 aa17.71■□□□□ 0.43
PHGDH-234ENST00000642041 DHX35Q9H5Z1 703 aaKnown RBP17.71■□□□□ 0.43
PHGDH-234ENST00000642041 ROPN1Q9HAT0 212 aaPredicted RBP17.71■□□□□ 0.43
PHGDH-234ENST00000642041 DNPEPQ9ULA0 475 aa17.71■□□□□ 0.43
PHGDH-234ENST00000642041 NEU2Q9Y3R4 380 aa17.71■□□□□ 0.43
PHGDH-234ENST00000642041 ESYT3A0FGR9 886 aa17.7■□□□□ 0.42
PHGDH-234ENST00000642041 FAM92AA1XBS5 289 aa17.7■□□□□ 0.42
PHGDH-234ENST00000642041 DNALI1O14645 258 aaPredicted RBP17.7■□□□□ 0.42
PHGDH-234ENST00000642041 TNFRSF10BO14763 440 aa17.7■□□□□ 0.42
PHGDH-234ENST00000642041 PPP1R12AO14974 1030 aaPredicted RBP17.7■□□□□ 0.42
PHGDH-234ENST00000642041 PAPSS2O95340 614 aaPredicted RBP17.7■□□□□ 0.42
PHGDH-234ENST00000642041 C8AP07357 584 aa17.7■□□□□ 0.42
PHGDH-234ENST00000642041 USP17L7P0C7H9 530 aa17.7■□□□□ 0.42
PHGDH-234ENST00000642041 TSHRP16473 764 aa17.7■□□□□ 0.42
PHGDH-234ENST00000642041 ECHS1P30084 290 aa17.7■□□□□ 0.42
PHGDH-234ENST00000642041 CCR1P32246 355 aa17.7■□□□□ 0.42
PHGDH-234ENST00000642041 KCNJ1P48048 391 aa17.7■□□□□ 0.42
PHGDH-234ENST00000642041 SLC5A3P53794 718 aa17.7■□□□□ 0.42
PHGDH-234ENST00000642041 SARNPP82979 210 aaKnown RBP17.7■□□□□ 0.42
PHGDH-234ENST00000642041 PDK1Q15118 436 aa17.7■□□□□ 0.42
PHGDH-234ENST00000642041 TAF5Q15542 800 aa17.7■□□□□ 0.42
PHGDH-234ENST00000642041 P3H1Q32P28 736 aa17.7■□□□□ 0.42
PHGDH-234ENST00000642041 TXNRD3NBQ6F5E7 133 aa17.7■□□□□ 0.42
PHGDH-234ENST00000642041 DARS2Q6PI48 645 aaKnown RBP17.7■□□□□ 0.42
PHGDH-234ENST00000642041 CYP4V2Q6ZWL3 525 aaPredicted RBP17.7■□□□□ 0.42
PHGDH-234ENST00000642041 TMC3Q7Z5M5 1100 aa17.7■□□□□ 0.42
PHGDH-234ENST00000642041 LRRTM3Q86VH5 581 aa17.7■□□□□ 0.42
PHGDH-234ENST00000642041 SPEM1Q8N4L4 309 aa17.7■□□□□ 0.42
PHGDH-234ENST00000642041 PLD5Q8N7P1 536 aa17.7■□□□□ 0.42
PHGDH-234ENST00000642041 SLC7A14Q8TBB6 771 aa17.7■□□□□ 0.42
PHGDH-234ENST00000642041 FAM3CQ92520 227 aa17.7■□□□□ 0.42
PHGDH-234ENST00000642041 GATA6Q92908 595 aa17.7■□□□□ 0.42
PHGDH-234ENST00000642041 ELSPBP1Q96BH3 223 aa17.7■□□□□ 0.42
PHGDH-234ENST00000642041 RTP4Q96DX8 246 aa17.7■□□□□ 0.42
PHGDH-234ENST00000642041 PIWIL1Q96J94 861 aaKnown RBP17.7■□□□□ 0.42
PHGDH-234ENST00000642041 LOXL4Q96JB6 756 aa17.7■□□□□ 0.42
PHGDH-234ENST00000642041 PPP1R2P1Q96PQ5 205 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms