RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 TLX3O43711 291 aaPredicted RBP8.11□□□□□ -1.11
CLK1-215ENST00000621181 SIN3BO75182 1162 aa8.11□□□□□ -1.11
CLK1-215ENST00000621181 WNT1P04628 370 aa8.11□□□□□ -1.11
CLK1-215ENST00000621181 MYL1P05976 194 aa8.11□□□□□ -1.11
CLK1-215ENST00000621181 SKILP12757 684 aa8.11□□□□□ -1.11
CLK1-215ENST00000621181 CD19P15391 556 aa8.11□□□□□ -1.11
CLK1-215ENST00000621181 GTF2H1P32780 548 aa8.11□□□□□ -1.11
CLK1-215ENST00000621181 ACADVLP49748 655 aa8.11□□□□□ -1.11
CLK1-215ENST00000621181 GSDMDP57764 484 aa8.11□□□□□ -1.11
CLK1-215ENST00000621181 ADAM9Q13443 819 aa8.11□□□□□ -1.11
CLK1-215ENST00000621181 CDH18Q13634 790 aa8.11□□□□□ -1.11
CLK1-215ENST00000621181 HNRNPA1L2Q32P51 320 aaKnown RBP8.11□□□□□ -1.11
CLK1-215ENST00000621181 SGO2Q562F6 1265 aa8.11□□□□□ -1.11
CLK1-215ENST00000621181 SLC45A4Q5BKX6 768 aa8.11□□□□□ -1.11
CLK1-215ENST00000621181 PIK3R6Q5UE93 754 aa8.11□□□□□ -1.11
CLK1-215ENST00000621181 NUGGCQ68CJ6 796 aa8.11□□□□□ -1.11
CLK1-215ENST00000621181 BHLHA9Q7RTU4 235 aa8.11□□□□□ -1.11
CLK1-215ENST00000621181 UNC45BQ8IWX7 931 aa8.11□□□□□ -1.11
CLK1-215ENST00000621181 OR2T34Q8NGX1 318 aa8.11□□□□□ -1.11
CLK1-215ENST00000621181 OR14C36Q8NHC7 312 aa8.11□□□□□ -1.11
CLK1-215ENST00000621181 SAP25Q8TEE9 199 aa8.11□□□□□ -1.11
CLK1-215ENST00000621181 SEMA4DQ92854 862 aa8.11□□□□□ -1.11
CLK1-215ENST00000621181 TATDN2Q93075 761 aa8.11□□□□□ -1.11
CLK1-215ENST00000621181 CCDC47Q96A33 483 aaKnown RBP8.11□□□□□ -1.11
CLK1-215ENST00000621181 EEF2KMTQ96G04 330 aa8.11□□□□□ -1.11
CLK1-215ENST00000621181 C16orf45Q96MC5 204 aaPredicted RBP8.11□□□□□ -1.11
CLK1-215ENST00000621181 PRORYQ9H606 182 aa8.11□□□□□ -1.11
CLK1-215ENST00000621181 RAB20Q9NX57 234 aa8.11□□□□□ -1.11
CLK1-215ENST00000621181 FZD4Q9ULV1 537 aa8.11□□□□□ -1.11
CLK1-215ENST00000621181 RAI2Q9Y5P3 530 aa8.11□□□□□ -1.11
CLK1-215ENST00000621181 ARID1BQ8NFD5 2236 aaPredicted RBP8.11□□□□□ -1.11
CLK1-215ENST00000621181 ASLP04424 464 aa8.1□□□□□ -1.11
CLK1-215ENST00000621181 LCP1P13796 627 aa8.1□□□□□ -1.11
CLK1-215ENST00000621181 EPHA8P29322 1005 aaPredicted RBP8.1□□□□□ -1.11
CLK1-215ENST00000621181 SLC6A4P31645 630 aa8.1□□□□□ -1.11
CLK1-215ENST00000621181 SLC8A1P32418 973 aa8.1□□□□□ -1.11
CLK1-215ENST00000621181 CSKP41240 450 aa8.1□□□□□ -1.11
CLK1-215ENST00000621181 ENPEPQ07075 957 aa8.1□□□□□ -1.11
CLK1-215ENST00000621181 KCNJ12Q14500 433 aa8.1□□□□□ -1.11
CLK1-215ENST00000621181 RTP5Q14D33 572 aa8.1□□□□□ -1.11
CLK1-215ENST00000621181 NFIL3Q16649 462 aa8.1□□□□□ -1.11
CLK1-215ENST00000621181 GPR155Q7Z3F1 870 aa8.1□□□□□ -1.11
CLK1-215ENST00000621181 HJURPQ8NCD3 748 aaPredicted RBP8.1□□□□□ -1.11
CLK1-215ENST00000621181 LSM14AQ8ND56 463 aaKnown RBP8.1□□□□□ -1.11
CLK1-215ENST00000621181 SNIP1Q8TAD8 396 aaKnown RBP8.1□□□□□ -1.11
CLK1-215ENST00000621181 FGF11Q92914 225 aa8.1□□□□□ -1.11
CLK1-215ENST00000621181 MYO19Q96H55 970 aa8.1□□□□□ -1.11
CLK1-215ENST00000621181 HS3ST6Q96QI5 342 aa8.1□□□□□ -1.11
CLK1-215ENST00000621181 XPO4Q9C0E2 1151 aaKnown RBP8.1□□□□□ -1.11
CLK1-215ENST00000621181 EBF2Q9HAK2 575 aa8.1□□□□□ -1.11
CLK1-215ENST00000621181 CNGB3Q9NQW8 809 aa8.1□□□□□ -1.11
CLK1-215ENST00000621181 ZNF462Q96JM2 2506 aa8.1□□□□□ -1.11
CLK1-215ENST00000621181 TBC1D3DA0A087WVF3 549 aa8.1□□□□□ -1.11
CLK1-215ENST00000621181 TBC1D3IA0A087WXS9 549 aa8.1□□□□□ -1.11
CLK1-215ENST00000621181 TBC1D3EA0A087X179 549 aa8.1□□□□□ -1.11
CLK1-215ENST00000621181 TBC1D3KA0A087X1G2 549 aa8.1□□□□□ -1.11
CLK1-215ENST00000621181 TEX51A0A1B0GUA7 166 aa8.1□□□□□ -1.11
CLK1-215ENST00000621181 GOLGA6L7A0A1B0GV03 622 aa8.1□□□□□ -1.11
CLK1-215ENST00000621181 TBC1D3FA6NER0 549 aaPredicted RBP8.1□□□□□ -1.11
CLK1-215ENST00000621181 TBC1D3LB9A6J9 549 aa8.1□□□□□ -1.11
CLK1-215ENST00000621181 TLR4O00206 839 aa8.1□□□□□ -1.11
CLK1-215ENST00000621181 BRINP1O60477 761 aa8.1□□□□□ -1.11
CLK1-215ENST00000621181 STX10O60499 249 aa8.1□□□□□ -1.11
CLK1-215ENST00000621181 MOCS3O95396 460 aa8.1□□□□□ -1.11
CLK1-215ENST00000621181 TBC1D3HP0C7X1 549 aa8.1□□□□□ -1.11
CLK1-215ENST00000621181 SETSIPP0DME0 302 aa8.1□□□□□ -1.11
CLK1-215ENST00000621181 CKMT2P17540 419 aa8.1□□□□□ -1.11
CLK1-215ENST00000621181 BMP6P22004 513 aa8.1□□□□□ -1.11
CLK1-215ENST00000621181 SYKP43405 635 aa8.1□□□□□ -1.11
CLK1-215ENST00000621181 PSMD8P48556 350 aa8.1□□□□□ -1.11
CLK1-215ENST00000621181 ADPRHP54922 357 aa8.1□□□□□ -1.11
CLK1-215ENST00000621181 RPS24P62847 133 aaKnown RBP8.1□□□□□ -1.11
CLK1-215ENST00000621181 ILKQ13418 452 aa8.1□□□□□ -1.11
CLK1-215ENST00000621181 SHBQ15464 509 aa8.1□□□□□ -1.11
CLK1-215ENST00000621181 FAM133BQ5BKY9 247 aaKnown RBP8.1□□□□□ -1.11
CLK1-215ENST00000621181 DCAF17Q5H9S7 520 aaPredicted RBP8.1□□□□□ -1.11
CLK1-215ENST00000621181 C9orf64Q5T6V5 341 aa8.1□□□□□ -1.11
CLK1-215ENST00000621181 TCERG1LQ5VWI1 586 aa8.1□□□□□ -1.11
CLK1-215ENST00000621181 RNF219Q5W0B1 726 aaPredicted RBP8.1□□□□□ -1.11
CLK1-215ENST00000621181 E4F1Q66K89 784 aaPredicted RBP8.1□□□□□ -1.11
CLK1-215ENST00000621181 TBC1D3GQ6DHY5 549 aa8.1□□□□□ -1.11
CLK1-215ENST00000621181 TBC1D3CQ6IPX1 549 aa8.1□□□□□ -1.11
CLK1-215ENST00000621181 FBXL19Q6PCT2 694 aa8.1□□□□□ -1.11
CLK1-215ENST00000621181 TBC1D3Q8IZP1 549 aaPredicted RBP8.1□□□□□ -1.11
CLK1-215ENST00000621181 CARNMT1Q8N4J0 409 aa8.1□□□□□ -1.11
CLK1-215ENST00000621181 FIBINQ8TAL6 211 aa8.1□□□□□ -1.11
CLK1-215ENST00000621181 UBA3Q8TBC4 463 aa8.1□□□□□ -1.11
CLK1-215ENST00000621181 TTC17Q96AE7 1141 aa8.1□□□□□ -1.11
CLK1-215ENST00000621181 DDX50Q9BQ39 737 aaKnown RBP8.1□□□□□ -1.11
CLK1-215ENST00000621181 IRX2Q9BZI1 471 aaPredicted RBP8.1□□□□□ -1.11
CLK1-215ENST00000621181 ADAMTS1Q9UHI8 967 aa8.1□□□□□ -1.11
CLK1-215ENST00000621181 TPX2Q9ULW0 747 aaKnown RBP8.1□□□□□ -1.11
CLK1-215ENST00000621181 CLCA2Q9UQC9 943 aa8.1□□□□□ -1.11
CLK1-215ENST00000621181 EDDM13A0A1B0GTR0 161 aa8.09□□□□□ -1.11
CLK1-215ENST00000621181 TTC34A8MYJ7 566 aa8.09□□□□□ -1.11
CLK1-215ENST00000621181 PIK3R2O00459 728 aa8.09□□□□□ -1.11
CLK1-215ENST00000621181 WNT9AO14904 365 aa8.09□□□□□ -1.11
CLK1-215ENST00000621181 ACSL4O60488 711 aa8.09□□□□□ -1.11
CLK1-215ENST00000621181 RHOBTB3O94955 611 aa8.09□□□□□ -1.11
CLK1-215ENST00000621181 ADH1BP00325 375 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms