RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 VPS28Q9UK41 221 aa17.77■□□□□ 0.44
SHKBP1-212ENST00000596163 GMEB2Q9UKD1 530 aa17.77■□□□□ 0.44
SHKBP1-212ENST00000596163 FZD10Q9ULW2 581 aa17.77■□□□□ 0.44
SHKBP1-212ENST00000596163 WDFY4Q6ZS81 3184 aa17.77■□□□□ 0.44
SHKBP1-212ENST00000596163 ATG2BQ96BY7 2078 aa17.76■□□□□ 0.43
SHKBP1-212ENST00000596163 CYP1A2P05177 515 aa17.76■□□□□ 0.43
SHKBP1-212ENST00000596163 H2AFZP0C0S5 128 aa17.76■□□□□ 0.43
SHKBP1-212ENST00000596163 RHOQP17081 205 aa17.76■□□□□ 0.43
SHKBP1-212ENST00000596163 GABRG2P18507 467 aa17.76■□□□□ 0.43
SHKBP1-212ENST00000596163 PRKCHP24723 683 aa17.76■□□□□ 0.43
SHKBP1-212ENST00000596163 MZF1P28698 734 aaPredicted RBP17.76■□□□□ 0.43
SHKBP1-212ENST00000596163 L1CAMP32004 1257 aa17.76■□□□□ 0.43
SHKBP1-212ENST00000596163 IRAK1P51617 712 aa17.76■□□□□ 0.43
SHKBP1-212ENST00000596163 GALCP54803 685 aa17.76■□□□□ 0.43
SHKBP1-212ENST00000596163 OGDHQ02218 1023 aa17.76■□□□□ 0.43
SHKBP1-212ENST00000596163 GFPT1Q06210 699 aaPredicted RBP17.76■□□□□ 0.43
SHKBP1-212ENST00000596163 SRSF5Q13243 272 aaKnown RBP17.76■□□□□ 0.43
SHKBP1-212ENST00000596163 PIGHQ14442 188 aaPredicted RBP17.76■□□□□ 0.43
SHKBP1-212ENST00000596163 ELF2Q15723 593 aa17.76■□□□□ 0.43
SHKBP1-212ENST00000596163 H2AFVQ71UI9 128 aa17.76■□□□□ 0.43
SHKBP1-212ENST00000596163 ASCL5Q7RTU5 278 aa17.76■□□□□ 0.43
SHKBP1-212ENST00000596163 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.76■□□□□ 0.43
SHKBP1-212ENST00000596163 METTL3Q86U44 580 aaKnown RBP17.76■□□□□ 0.43
SHKBP1-212ENST00000596163 CTNNBL1Q8WYA6 563 aaPredicted RBP17.76■□□□□ 0.43
SHKBP1-212ENST00000596163 RUBCNQ92622 972 aa17.76■□□□□ 0.43
SHKBP1-212ENST00000596163 EPAS1Q99814 870 aa17.76■□□□□ 0.43
SHKBP1-212ENST00000596163 C2orf49Q9BVC5 232 aaPredicted RBP17.76■□□□□ 0.43
SHKBP1-212ENST00000596163 NHEJ1Q9H9Q4 299 aaPredicted RBP17.76■□□□□ 0.43
SHKBP1-212ENST00000596163 PRDM16Q9HAZ2 1276 aa17.76■□□□□ 0.43
SHKBP1-212ENST00000596163 CD248Q9HCU0 757 aa17.76■□□□□ 0.43
SHKBP1-212ENST00000596163 DONSONQ9NYP3 566 aa17.76■□□□□ 0.43
SHKBP1-212ENST00000596163 NCDNQ9UBB6 729 aa17.76■□□□□ 0.43
SHKBP1-212ENST00000596163 IP6K2Q9UHH9 426 aa17.76■□□□□ 0.43
SHKBP1-212ENST00000596163 LCMT1Q9UIC8 334 aa17.76■□□□□ 0.43
SHKBP1-212ENST00000596163 SLC25A13Q9UJS0 675 aa17.76■□□□□ 0.43
SHKBP1-212ENST00000596163 ILVBLA1L0T0 632 aa17.75■□□□□ 0.43
SHKBP1-212ENST00000596163 TARSL2A2RTX5 802 aaKnown RBP17.75■□□□□ 0.43
SHKBP1-212ENST00000596163 MAP3K13O43283 966 aa17.75■□□□□ 0.43
SHKBP1-212ENST00000596163 PRPSAP2O60256 369 aa17.75■□□□□ 0.43
SHKBP1-212ENST00000596163 NDUFV2P19404 249 aa17.75■□□□□ 0.43
SHKBP1-212ENST00000596163 HTR7P34969 479 aa17.75■□□□□ 0.43
SHKBP1-212ENST00000596163 ETFBP38117 255 aa17.75■□□□□ 0.43
SHKBP1-212ENST00000596163 P2RY2P41231 377 aa17.75■□□□□ 0.43
SHKBP1-212ENST00000596163 MAPKAPK2P49137 400 aa17.75■□□□□ 0.43
SHKBP1-212ENST00000596163 VASPP50552 380 aaPredicted RBP17.75■□□□□ 0.43
SHKBP1-212ENST00000596163 CAMK2GQ13555 558 aaPredicted RBP17.75■□□□□ 0.43
SHKBP1-212ENST00000596163 ASTE1Q2TB18 679 aaPredicted RBP17.75■□□□□ 0.43
SHKBP1-212ENST00000596163 MANEALQ5VSG8 457 aa17.75■□□□□ 0.43
SHKBP1-212ENST00000596163 TFAP2DQ7Z6R9 452 aa17.75■□□□□ 0.43
SHKBP1-212ENST00000596163 PSTKQ8IV42 348 aaKnown RBP17.75■□□□□ 0.43
SHKBP1-212ENST00000596163 OR2T3Q8NH03 318 aa17.75■□□□□ 0.43
SHKBP1-212ENST00000596163 PRCCQ92733 491 aaPredicted RBP17.75■□□□□ 0.43
SHKBP1-212ENST00000596163 LOXL4Q96JB6 756 aa17.75■□□□□ 0.43
SHKBP1-212ENST00000596163 ZC3H10Q96K80 434 aaKnown RBP17.75■□□□□ 0.43
SHKBP1-212ENST00000596163 HINFPQ9BQA5 517 aa17.75■□□□□ 0.43
SHKBP1-212ENST00000596163 NUP85Q9BW27 656 aa17.75■□□□□ 0.43
SHKBP1-212ENST00000596163 MYO1FO00160 1098 aa17.74■□□□□ 0.43
SHKBP1-212ENST00000596163 RNASEH1O60930 286 aaKnown RBP17.74■□□□□ 0.43
SHKBP1-212ENST00000596163 LRIG2O94898 1065 aa17.74■□□□□ 0.43
SHKBP1-212ENST00000596163 RETP07949 1114 aa17.74■□□□□ 0.43
SHKBP1-212ENST00000596163 ACADMP11310 421 aa17.74■□□□□ 0.43
SHKBP1-212ENST00000596163 HLA-EP13747 358 aa17.74■□□□□ 0.43
SHKBP1-212ENST00000596163 PCK1P35558 622 aa17.74■□□□□ 0.43
SHKBP1-212ENST00000596163 ZNF135P52742 658 aaPredicted RBP17.74■□□□□ 0.43
SHKBP1-212ENST00000596163 SFSWAPQ12872 951 aaKnown RBP17.74■□□□□ 0.43
SHKBP1-212ENST00000596163 HNRNPA1L2Q32P51 320 aaKnown RBP17.74■□□□□ 0.43
SHKBP1-212ENST00000596163 ERMARDQ5T6L9 678 aa17.74■□□□□ 0.43
SHKBP1-212ENST00000596163 KIAA1324Q6UXG2 1013 aaKnown RBP17.74■□□□□ 0.43
SHKBP1-212ENST00000596163 SLC36A4Q6YBV0 504 aa17.74■□□□□ 0.43
SHKBP1-212ENST00000596163 TMPRSS6Q8IU80 811 aa17.74■□□□□ 0.43
SHKBP1-212ENST00000596163 ALG14Q96F25 216 aa17.74■□□□□ 0.43
SHKBP1-212ENST00000596163 SIPA1Q96FS4 1042 aa17.74■□□□□ 0.43
SHKBP1-212ENST00000596163 MRGPRX3Q96LB0 322 aa17.74■□□□□ 0.43
SHKBP1-212ENST00000596163 MRGPRX1Q96LB2 322 aa17.74■□□□□ 0.43
SHKBP1-212ENST00000596163 CHP1Q99653 195 aa17.74■□□□□ 0.43
SHKBP1-212ENST00000596163 CATSPERBQ9H7T0 1116 aa17.74■□□□□ 0.43
SHKBP1-212ENST00000596163 TMEM248Q9NWD8 314 aa17.74■□□□□ 0.43
SHKBP1-212ENST00000596163 CTTNBP2NLQ9P2B4 639 aa17.74■□□□□ 0.43
SHKBP1-212ENST00000596163 UVRAGQ9P2Y5 699 aa17.74■□□□□ 0.43
SHKBP1-212ENST00000596163 NENFQ9UMX5 172 aa17.74■□□□□ 0.43
SHKBP1-212ENST00000596163 OR51B4Q9Y5P0 310 aa17.74■□□□□ 0.43
SHKBP1-212ENST00000596163 EDDM13A0A1B0GTR0 161 aa17.73■□□□□ 0.43
SHKBP1-212ENST00000596163 FAM72CH0Y354 149 aa17.73■□□□□ 0.43
SHKBP1-212ENST00000596163 EPHB2P29323 1055 aa17.73■□□□□ 0.43
SHKBP1-212ENST00000596163 MIPP30301 263 aa17.73■□□□□ 0.43
SHKBP1-212ENST00000596163 OXTRP30559 389 aa17.73■□□□□ 0.43
SHKBP1-212ENST00000596163 HOXD11P31277 338 aaPredicted RBP17.73■□□□□ 0.43
SHKBP1-212ENST00000596163 CTSOP43234 321 aaPredicted RBP17.73■□□□□ 0.43
SHKBP1-212ENST00000596163 ZBTB16Q05516 673 aa17.73■□□□□ 0.43
SHKBP1-212ENST00000596163 LPAL2Q16609 132 aa17.73■□□□□ 0.43
SHKBP1-212ENST00000596163 PLK5Q496M5 336 aa17.73■□□□□ 0.43
SHKBP1-212ENST00000596163 BOLA3Q53S33 107 aa17.73■□□□□ 0.43
SHKBP1-212ENST00000596163 FAM72AQ5TYM5 149 aa17.73■□□□□ 0.43
SHKBP1-212ENST00000596163 FAM72DQ6L9T8 149 aa17.73■□□□□ 0.43
SHKBP1-212ENST00000596163 KBTBD6Q86V97 674 aa17.73■□□□□ 0.43
SHKBP1-212ENST00000596163 FAM72BQ86X60 149 aa17.73■□□□□ 0.43
SHKBP1-212ENST00000596163 GPR161Q8N6U8 529 aaKnown RBP17.73■□□□□ 0.43
SHKBP1-212ENST00000596163 DCAF4L2Q8NA75 395 aa17.73■□□□□ 0.43
SHKBP1-212ENST00000596163 ERLEC1Q96DZ1 483 aa17.73■□□□□ 0.43
SHKBP1-212ENST00000596163 RPL10LQ96L21 214 aaKnown RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms