RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 A0A0U1RQJ8 604 aa20.11■□□□□ 0.81
CIRBP-220ENST00000588917 ILVBLA1L0T0 632 aa20.11■□□□□ 0.81
CIRBP-220ENST00000588917 GRID2IPA4D2P6 1211 aa20.11■□□□□ 0.81
CIRBP-220ENST00000588917 ZNF487B1APH4 448 aa20.11■□□□□ 0.81
CIRBP-220ENST00000588917 NPC1O15118 1278 aa20.11■□□□□ 0.81
CIRBP-220ENST00000588917 ZRANB2O95218 330 aaKnown RBP eCLIP20.11■□□□□ 0.81
CIRBP-220ENST00000588917 ATP5BP06576 529 aaKnown RBP20.11■□□□□ 0.81
CIRBP-220ENST00000588917 PABPC1P11940 636 aaKnown RBP20.11■□□□□ 0.81
CIRBP-220ENST00000588917 TNNT1P13805 278 aa20.11■□□□□ 0.81
CIRBP-220ENST00000588917 GOT1P17174 413 aa20.11■□□□□ 0.81
CIRBP-220ENST00000588917 KDELR1P24390 212 aa20.11■□□□□ 0.81
CIRBP-220ENST00000588917 GJC1P36383 396 aa20.11■□□□□ 0.81
CIRBP-220ENST00000588917 PLK1P53350 603 aa20.11■□□□□ 0.81
CIRBP-220ENST00000588917 KDSRQ06136 332 aa20.11■□□□□ 0.81
CIRBP-220ENST00000588917 CCINQ13939 588 aa20.11■□□□□ 0.81
CIRBP-220ENST00000588917 ATP13A4Q4VNC1 1196 aa20.11■□□□□ 0.81
CIRBP-220ENST00000588917 ARTNQ5T4W7 220 aa20.11■□□□□ 0.81
CIRBP-220ENST00000588917 FSTL4Q6MZW2 842 aa20.11■□□□□ 0.81
CIRBP-220ENST00000588917 NLRP14Q86W24 1093 aa20.11■□□□□ 0.81
CIRBP-220ENST00000588917 CIR1Q86X95 450 aaPredicted RBP20.11■□□□□ 0.81
CIRBP-220ENST00000588917 RCOR2Q8IZ40 523 aa20.11■□□□□ 0.81
CIRBP-220ENST00000588917 RTL3Q8N8U3 475 aaKnown RBP20.11■□□□□ 0.81
CIRBP-220ENST00000588917 TRIM58Q8NG06 486 aa20.11■□□□□ 0.81
CIRBP-220ENST00000588917 PJA1Q8NG27 643 aa20.11■□□□□ 0.81
CIRBP-220ENST00000588917 ATRIPQ8WXE1 791 aa20.11■□□□□ 0.81
CIRBP-220ENST00000588917 ZNF670Q9BS34 389 aa20.11■□□□□ 0.81
CIRBP-220ENST00000588917 CALN1Q9BXU9 219 aa20.11■□□□□ 0.81
CIRBP-220ENST00000588917 PCDH18Q9HCL0 1135 aa20.11■□□□□ 0.81
CIRBP-220ENST00000588917 HYOU1Q9Y4L1 999 aa20.11■□□□□ 0.81
CIRBP-220ENST00000588917 PCDHA3Q9Y5H8 950 aa20.11■□□□□ 0.81
CIRBP-220ENST00000588917 K7EQS6 105 aa20.1■□□□□ 0.81
CIRBP-220ENST00000588917 ATG13O75143 517 aa20.1■□□□□ 0.81
CIRBP-220ENST00000588917 RHOCP08134 193 aa20.1■□□□□ 0.81
CIRBP-220ENST00000588917 CHRNB1P11230 501 aa20.1■□□□□ 0.81
CIRBP-220ENST00000588917 POLR2EP19388 210 aaKnown RBP20.1■□□□□ 0.81
CIRBP-220ENST00000588917 MSNP26038 577 aaKnown RBP20.1■□□□□ 0.81
CIRBP-220ENST00000588917 TARSP26639 723 aaKnown RBP20.1■□□□□ 0.81
CIRBP-220ENST00000588917 CETN2P41208 172 aa20.1■□□□□ 0.81
CIRBP-220ENST00000588917 RPS9P46781 194 aaKnown RBP20.1■□□□□ 0.81
CIRBP-220ENST00000588917 ARSEP51690 589 aa20.1■□□□□ 0.81
CIRBP-220ENST00000588917 YBEYP58557 167 aaPredicted RBP20.1■□□□□ 0.81
CIRBP-220ENST00000588917 MRPS21P82921 87 aaKnown RBP20.1■□□□□ 0.81
CIRBP-220ENST00000588917 SULT2A1Q06520 285 aa20.1■□□□□ 0.81
CIRBP-220ENST00000588917 LMAN2Q12907 356 aa20.1■□□□□ 0.81
CIRBP-220ENST00000588917 FSCBQ5H9T9 825 aa20.1■□□□□ 0.81
CIRBP-220ENST00000588917 TRMT11Q7Z4G4 463 aaKnown RBP20.1■□□□□ 0.81
CIRBP-220ENST00000588917 TFAP2DQ7Z6R9 452 aa20.1■□□□□ 0.81
CIRBP-220ENST00000588917 NT5DC3Q86UY8 548 aa20.1■□□□□ 0.81
CIRBP-220ENST00000588917 CPNE8Q86YQ8 564 aa20.1■□□□□ 0.81
CIRBP-220ENST00000588917 KATNAL2Q8IYT4 538 aa20.1■□□□□ 0.81
CIRBP-220ENST00000588917 ZNF687Q8N1G0 1237 aa20.1■□□□□ 0.81
CIRBP-220ENST00000588917 UBL4BQ8N7F7 174 aa20.1■□□□□ 0.81
CIRBP-220ENST00000588917 CLDN23Q96B33 292 aa20.1■□□□□ 0.81
CIRBP-220ENST00000588917 MAK16Q9BXY0 300 aaKnown RBP20.1■□□□□ 0.81
CIRBP-220ENST00000588917 MUC3BQ9H195 1237 aa20.1■□□□□ 0.81
CIRBP-220ENST00000588917 MAGEH1Q9H213 219 aa20.1■□□□□ 0.81
CIRBP-220ENST00000588917 ELOVL2Q9NXB9 296 aa20.1■□□□□ 0.81
CIRBP-220ENST00000588917 PLA2G4CQ9UP65 541 aa20.1■□□□□ 0.81
CIRBP-220ENST00000588917 PROB1E7EW31 1015 aa20.09■□□□□ 0.81
CIRBP-220ENST00000588917 TRIM24O15164 1050 aa20.09■□□□□ 0.81
CIRBP-220ENST00000588917 EGFP01133 1207 aa20.09■□□□□ 0.81
CIRBP-220ENST00000588917 ASLP04424 464 aa20.09■□□□□ 0.81
CIRBP-220ENST00000588917 ERCC2P18074 760 aa20.09■□□□□ 0.81
CIRBP-220ENST00000588917 AOC1P19801 751 aa20.09■□□□□ 0.81
CIRBP-220ENST00000588917 CTNNA2P26232 953 aa20.09■□□□□ 0.81
CIRBP-220ENST00000588917 CD70P32970 193 aa20.09■□□□□ 0.81
CIRBP-220ENST00000588917 CTNNA1P35221 906 aaKnown RBP20.09■□□□□ 0.81
CIRBP-220ENST00000588917 IRAK1P51617 712 aa20.09■□□□□ 0.81
CIRBP-220ENST00000588917 GEN1Q17RS7 908 aa20.09■□□□□ 0.81
CIRBP-220ENST00000588917 HSF5Q4G112 596 aaPredicted RBP20.09■□□□□ 0.81
CIRBP-220ENST00000588917 RNF219Q5W0B1 726 aaPredicted RBP20.09■□□□□ 0.81
CIRBP-220ENST00000588917 CXorf57Q6NSI4 855 aaKnown RBP20.09■□□□□ 0.81
CIRBP-220ENST00000588917 EXD1Q8NHP7 514 aa20.09■□□□□ 0.81
CIRBP-220ENST00000588917 TSC1Q92574 1164 aa20.09■□□□□ 0.81
CIRBP-220ENST00000588917 TTC17Q96AE7 1141 aa20.09■□□□□ 0.81
CIRBP-220ENST00000588917 RBM41Q96IZ5 413 aaKnown RBP20.09■□□□□ 0.81
CIRBP-220ENST00000588917 LMLNQ96KR4 655 aa20.09■□□□□ 0.81
CIRBP-220ENST00000588917 CSPG4P5Q96PW8 444 aa20.09■□□□□ 0.81
CIRBP-220ENST00000588917 FEM1AQ9BSK4 669 aa20.09■□□□□ 0.81
CIRBP-220ENST00000588917 IER2Q9BTL4 223 aa20.09■□□□□ 0.81
CIRBP-220ENST00000588917 FOXQ1Q9C009 403 aa20.09■□□□□ 0.81
CIRBP-220ENST00000588917 GOLPH3Q9H4A6 298 aa20.09■□□□□ 0.81
CIRBP-220ENST00000588917 DNAI1Q9UI46 699 aa20.09■□□□□ 0.81
CIRBP-220ENST00000588917 LRRD1A4D1F6 860 aa20.08■□□□□ 0.81
CIRBP-220ENST00000588917 RAMP2O60895 175 aa20.08■□□□□ 0.81
CIRBP-220ENST00000588917 IL4RP24394 825 aa20.08■□□□□ 0.81
CIRBP-220ENST00000588917 NDST2P52849 883 aa20.08■□□□□ 0.81
CIRBP-220ENST00000588917 RWDD2BP57060 319 aa20.08■□□□□ 0.81
CIRBP-220ENST00000588917 GNA12Q03113 381 aa20.08■□□□□ 0.81
CIRBP-220ENST00000588917 DPYSQ14117 519 aa20.08■□□□□ 0.81
CIRBP-220ENST00000588917 DPYSL3Q14195 570 aa20.08■□□□□ 0.81
CIRBP-220ENST00000588917 POLD3Q15054 466 aaPredicted RBP20.08■□□□□ 0.81
CIRBP-220ENST00000588917 PLEKHG6Q3KR16 790 aa20.08■□□□□ 0.81
CIRBP-220ENST00000588917 HS1BP3Q53T59 392 aa20.08■□□□□ 0.81
CIRBP-220ENST00000588917 PITRM1Q5JRX3 1037 aa20.08■□□□□ 0.81
CIRBP-220ENST00000588917 MBLAC2Q68D91 279 aa20.08■□□□□ 0.81
CIRBP-220ENST00000588917 NAIF1Q69YI7 327 aaPredicted RBP20.08■□□□□ 0.81
CIRBP-220ENST00000588917 SDE2Q6IQ49 451 aa20.08■□□□□ 0.81
CIRBP-220ENST00000588917 ADIPOR2Q86V24 386 aa20.08■□□□□ 0.81
CIRBP-220ENST00000588917 REXO1L1PQ8IX06 675 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms