RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 MYO19Q96H55 970 aa17.12■□□□□ 0.33
SREBF1-219ENST00000580540 PPP1R9BQ96SB3 815 aa17.12■□□□□ 0.33
SREBF1-219ENST00000580540 NUP58Q9BVL2 599 aa17.12■□□□□ 0.33
SREBF1-219ENST00000580540 RAB6CQ9H0N0 254 aa17.12■□□□□ 0.33
SREBF1-219ENST00000580540 MUC3BQ9H195 1237 aa17.12■□□□□ 0.33
SREBF1-219ENST00000580540 TMEM51Q9NW97 253 aa17.12■□□□□ 0.33
SREBF1-219ENST00000580540 WSB2Q9NYS7 404 aaPredicted RBP17.12■□□□□ 0.33
SREBF1-219ENST00000580540 MPP6Q9NZW5 540 aa17.12■□□□□ 0.33
SREBF1-219ENST00000580540 PILRBQ9UKJ0 227 aa17.12■□□□□ 0.33
SREBF1-219ENST00000580540 CEP192Q8TEP8 1941 aa17.11■□□□□ 0.33
SREBF1-219ENST00000580540 A0A1W2PQC6 194 aa17.11■□□□□ 0.33
SREBF1-219ENST00000580540 C2CD4BA6NLJ0 364 aa17.11■□□□□ 0.33
SREBF1-219ENST00000580540 MEI4A8MW99 385 aa17.11■□□□□ 0.33
SREBF1-219ENST00000580540 RHOCP08134 193 aa17.11■□□□□ 0.33
SREBF1-219ENST00000580540 MAOBP27338 520 aa17.11■□□□□ 0.33
SREBF1-219ENST00000580540 DPP6P42658 865 aa17.11■□□□□ 0.33
SREBF1-219ENST00000580540 SULT2A1Q06520 285 aa17.11■□□□□ 0.33
SREBF1-219ENST00000580540 NR1I3Q14994 352 aa17.11■□□□□ 0.33
SREBF1-219ENST00000580540 SKOR2Q2VWA4 1001 aaPredicted RBP17.11■□□□□ 0.33
SREBF1-219ENST00000580540 HNRNPA1L2Q32P51 320 aaKnown RBP17.11■□□□□ 0.33
SREBF1-219ENST00000580540 CCDC14Q49A88 953 aa17.11■□□□□ 0.33
SREBF1-219ENST00000580540 ACCSLQ4AC99 568 aa17.11■□□□□ 0.33
SREBF1-219ENST00000580540 ALFQ53S48 1182 aa17.11■□□□□ 0.33
SREBF1-219ENST00000580540 SYCP2LQ5T4T6 812 aa17.11■□□□□ 0.33
SREBF1-219ENST00000580540 SFMBT2Q5VUG0 894 aa17.11■□□□□ 0.33
SREBF1-219ENST00000580540 ZNF776Q68DI1 518 aaPredicted RBP17.11■□□□□ 0.33
SREBF1-219ENST00000580540 DNAJC24Q6P3W2 148 aa17.11■□□□□ 0.33
SREBF1-219ENST00000580540 LRSAM1Q6UWE0 723 aa17.11■□□□□ 0.33
SREBF1-219ENST00000580540 ERMP1Q7Z2K6 904 aa17.11■□□□□ 0.33
SREBF1-219ENST00000580540 TFAP2DQ7Z6R9 452 aa17.11■□□□□ 0.33
SREBF1-219ENST00000580540 OR52K2Q8NGK3 314 aa17.11■□□□□ 0.33
SREBF1-219ENST00000580540 FOXJ1Q92949 421 aa17.11■□□□□ 0.33
SREBF1-219ENST00000580540 FEM1AQ9BSK4 669 aa17.11■□□□□ 0.33
SREBF1-219ENST00000580540 NUSAP1Q9BXS6 441 aaKnown RBP17.11■□□□□ 0.33
SREBF1-219ENST00000580540 FBRSQ9HAH7 460 aa17.11■□□□□ 0.33
SREBF1-219ENST00000580540 VPS28Q9UK41 221 aa17.11■□□□□ 0.33
SREBF1-219ENST00000580540 MYO6Q9UM54 1294 aa17.11■□□□□ 0.33
SREBF1-219ENST00000580540 EDDM13A0A1B0GTR0 161 aa17.1■□□□□ 0.33
SREBF1-219ENST00000580540 LNP1A1A4G5 178 aa17.1■□□□□ 0.33
SREBF1-219ENST00000580540 C4orf47A7E2U8 309 aa17.1■□□□□ 0.33
SREBF1-219ENST00000580540 E9PAM4 449 aa17.1■□□□□ 0.33
SREBF1-219ENST00000580540 RNASEH1O60930 286 aaKnown RBP17.1■□□□□ 0.33
SREBF1-219ENST00000580540 GPD1P21695 349 aa17.1■□□□□ 0.33
SREBF1-219ENST00000580540 RFC1P35251 1148 aaPredicted RBP17.1■□□□□ 0.33
SREBF1-219ENST00000580540 UBASH3AP57075 661 aa17.1■□□□□ 0.33
SREBF1-219ENST00000580540 C1QBPQ07021 282 aaKnown RBP17.1■□□□□ 0.33
SREBF1-219ENST00000580540 ARL13BQ3SXY8 428 aa17.1■□□□□ 0.33
SREBF1-219ENST00000580540 TTC31Q49AM3 519 aaPredicted RBP17.1■□□□□ 0.33
SREBF1-219ENST00000580540 WDR45BQ5MNZ6 344 aa17.1■□□□□ 0.33
SREBF1-219ENST00000580540 ACAD10Q6JQN1 1059 aa17.1■□□□□ 0.33
SREBF1-219ENST00000580540 WDR59Q6PJI9 974 aa17.1■□□□□ 0.33
SREBF1-219ENST00000580540 MON1BQ7L1V2 547 aa17.1■□□□□ 0.33
SREBF1-219ENST00000580540 C3orf20Q8ND61 904 aa17.1■□□□□ 0.33
SREBF1-219ENST00000580540 ZNF419Q96HQ0 510 aaPredicted RBP17.1■□□□□ 0.33
SREBF1-219ENST00000580540 C1orf74Q96LT6 269 aa17.1■□□□□ 0.33
SREBF1-219ENST00000580540 HAPLN3Q96S86 360 aa17.1■□□□□ 0.33
SREBF1-219ENST00000580540 MIR1-1HGQ9H1L0 117 aa17.1■□□□□ 0.33
SREBF1-219ENST00000580540 FSCN3Q9NQT6 498 aa17.1■□□□□ 0.33
SREBF1-219ENST00000580540 SLC25A13Q9UJS0 675 aa17.1■□□□□ 0.33
SREBF1-219ENST00000580540 MUC22E2RYF6 1773 aaPredicted RBP17.1■□□□□ 0.33
SREBF1-219ENST00000580540 TARSL2A2RTX5 802 aaKnown RBP17.09■□□□□ 0.33
SREBF1-219ENST00000580540 ANKRD62A6NC57 917 aa17.09■□□□□ 0.33
SREBF1-219ENST00000580540 SIGLEC16A6NMB1 481 aa17.09■□□□□ 0.33
SREBF1-219ENST00000580540 ENDOD1O94919 500 aa17.09■□□□□ 0.33
SREBF1-219ENST00000580540 MAPK8P45983 427 aa17.09■□□□□ 0.33
SREBF1-219ENST00000580540 PLK1P53350 603 aa17.09■□□□□ 0.33
SREBF1-219ENST00000580540 DUOXA1Q1HG43 343 aa17.09■□□□□ 0.33
SREBF1-219ENST00000580540 UAP1L1Q3KQV9 507 aa17.09■□□□□ 0.33
SREBF1-219ENST00000580540 C5orf22Q49AR2 442 aa17.09■□□□□ 0.33
SREBF1-219ENST00000580540 C9orf64Q5T6V5 341 aa17.09■□□□□ 0.33
SREBF1-219ENST00000580540 DCUN1D2Q6PH85 259 aa17.09■□□□□ 0.33
SREBF1-219ENST00000580540 BNIPLQ7Z465 357 aa17.09■□□□□ 0.33
SREBF1-219ENST00000580540 MMAAQ8IVH4 418 aaKnown RBP17.09■□□□□ 0.33
SREBF1-219ENST00000580540 ZNF683Q8IZ20 524 aa17.09■□□□□ 0.33
SREBF1-219ENST00000580540 STK40Q8N2I9 435 aa17.09■□□□□ 0.33
SREBF1-219ENST00000580540 KDM1BQ8NB78 822 aa17.09■□□□□ 0.33
SREBF1-219ENST00000580540 CEP76Q8TAP6 659 aa17.09■□□□□ 0.33
SREBF1-219ENST00000580540 FAM172AQ8WUF8 416 aa17.09■□□□□ 0.33
SREBF1-219ENST00000580540 SNX19Q92543 992 aa17.09■□□□□ 0.33
SREBF1-219ENST00000580540 RSPH9Q9H1X1 276 aaPredicted RBP17.09■□□□□ 0.33
SREBF1-219ENST00000580540 HAUS4Q9H6D7 363 aa17.09■□□□□ 0.33
SREBF1-219ENST00000580540 TAS2R14Q9NYV8 317 aa17.09■□□□□ 0.33
SREBF1-219ENST00000580540 NCKAP1Q9Y2A7 1128 aa17.09■□□□□ 0.33
SREBF1-219ENST00000580540 TBC1D30Q9Y2I9 924 aa17.09■□□□□ 0.33
SREBF1-219ENST00000580540 DRGXA6NNA5 263 aa17.08■□□□□ 0.32
SREBF1-219ENST00000580540 BNIP3LO60238 219 aa17.08■□□□□ 0.32
SREBF1-219ENST00000580540 SKILP12757 684 aa17.08■□□□□ 0.32
SREBF1-219ENST00000580540 VAV1P15498 845 aa17.08■□□□□ 0.32
SREBF1-219ENST00000580540 OR1E1P30953 314 aa17.08■□□□□ 0.32
SREBF1-219ENST00000580540 ACSL1P33121 698 aa17.08■□□□□ 0.32
SREBF1-219ENST00000580540 ADRA1BP35368 520 aa17.08■□□□□ 0.32
SREBF1-219ENST00000580540 PTPN9P43378 593 aa17.08■□□□□ 0.32
SREBF1-219ENST00000580540 PSMD8P48556 350 aa17.08■□□□□ 0.32
SREBF1-219ENST00000580540 LIMK1P53667 647 aa17.08■□□□□ 0.32
SREBF1-219ENST00000580540 ATXN3P54252 364 aaPredicted RBP17.08■□□□□ 0.32
SREBF1-219ENST00000580540 ZBTB16Q05516 673 aa17.08■□□□□ 0.32
SREBF1-219ENST00000580540 KLHL30Q0D2K2 578 aa17.08■□□□□ 0.32
SREBF1-219ENST00000580540 ACBD5Q5T8D3 534 aaPredicted RBP17.08■□□□□ 0.32
SREBF1-219ENST00000580540 DCAF12L1Q5VU92 463 aa17.08■□□□□ 0.32
SREBF1-219ENST00000580540 RWDD4Q6NW29 188 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms