RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 TRNP1Q6NT89 227 aa5.52□□□□□ -1.53
VAPA-203ENST00000577539 SLC26A11Q86WA9 606 aa5.52□□□□□ -1.53
VAPA-203ENST00000577539 NUDCD3Q8IVD9 361 aa5.52□□□□□ -1.53
VAPA-203ENST00000577539 ARID3BQ8IVW6 561 aaPredicted RBP5.52□□□□□ -1.53
VAPA-203ENST00000577539 SULF2Q8IWU5 870 aa5.52□□□□□ -1.53
VAPA-203ENST00000577539 GPC2Q8N158 579 aa5.52□□□□□ -1.53
VAPA-203ENST00000577539 NDUFAF2Q8N183 169 aa5.52□□□□□ -1.53
VAPA-203ENST00000577539 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.52□□□□□ -1.53
VAPA-203ENST00000577539 FAM13CQ8NE31 585 aa5.52□□□□□ -1.53
VAPA-203ENST00000577539 PCDH19Q8TAB3 1148 aa5.52□□□□□ -1.53
VAPA-203ENST00000577539 DEPDC1BQ8WUY9 529 aa5.52□□□□□ -1.53
VAPA-203ENST00000577539 SLC44A1Q8WWI5 657 aa5.52□□□□□ -1.53
VAPA-203ENST00000577539 NINJ1Q92982 152 aa5.52□□□□□ -1.53
VAPA-203ENST00000577539 APOPT1Q96IL0 206 aa5.52□□□□□ -1.53
VAPA-203ENST00000577539 VPS11Q9H270 941 aa5.52□□□□□ -1.53
VAPA-203ENST00000577539 YY1AP1Q9H869 796 aa5.52□□□□□ -1.53
VAPA-203ENST00000577539 PCDH18Q9HCL0 1135 aa5.52□□□□□ -1.53
VAPA-203ENST00000577539 PHIPQ8WWQ0 1821 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 FAM237BA0A1B0GVD1 139 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 ASB14A6NK59 587 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 CXorf49A8MYA2 514 aaPredicted RBP5.51□□□□□ -1.53
VAPA-203ENST00000577539 ZNF646O15015 1829 aaPredicted RBP5.51□□□□□ -1.53
VAPA-203ENST00000577539 RFPL3O75679 317 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 CCNB1P14635 433 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 AMPD1P23109 780 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 ARNTP27540 789 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 GSCP56915 257 aaPredicted RBP5.51□□□□□ -1.53
VAPA-203ENST00000577539 YWHAZP63104 245 aaKnown RBP5.51□□□□□ -1.53
VAPA-203ENST00000577539 MLLT1Q03111 559 aaPredicted RBP5.51□□□□□ -1.53
VAPA-203ENST00000577539 ACAP1Q15027 740 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 CHI3L2Q15782 390 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 SLC45A4Q5BKX6 768 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 ZNF484Q5JVG2 852 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 TMEM201Q5SNT2 666 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 HEATR6Q6AI08 1181 aaKnown RBP5.51□□□□□ -1.53
VAPA-203ENST00000577539 ASRGL1Q7L266 308 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 CLNKQ7Z7G1 428 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 DPP9Q86TI2 863 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 FAM131BQ86XD5 332 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 DTX3LQ8TDB6 740 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 UTP4Q969X6 686 aaKnown RBP5.51□□□□□ -1.53
VAPA-203ENST00000577539 OPTNQ96CV9 577 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 ASPSCR1Q9BZE9 553 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 LRMDAQ9H2I8 198 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 SETD4Q9NVD3 440 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 ETNK2Q9NVF9 386 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 ARL8BQ9NVJ2 186 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 RGS17Q9UGC6 210 aaPredicted RBP5.51□□□□□ -1.53
VAPA-203ENST00000577539 SLC45A1Q9Y2W3 748 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 UTRNP46939 3433 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 CCDC163A0A0D9SF12 145 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 CYB561D2O14569 222 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 TBX1O43435 398 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 KRT38O76015 456 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 ALADP13716 330 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 CCDC130P13994 396 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 AKAP5P24588 427 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 ARL4AP40617 200 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 GRIA1P42261 906 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 SKIV2L2P42285 1042 aaKnown RBP5.51□□□□□ -1.53
VAPA-203ENST00000577539 SLC6A3Q01959 620 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 PCDH1Q08174 1060 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 CCDC15Q0P6D6 951 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 PPP2R5DQ14738 602 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 PDK2Q15119 407 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 ANKRD20A2Q5SQ80 823 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 ANKRD20A1Q5TYW2 823 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 TRMT10BQ6PF06 316 aaKnown RBP5.51□□□□□ -1.53
VAPA-203ENST00000577539 KCNT2Q6UVM3 1135 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 LCLAT1Q6UWP7 414 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 ZCCHC23Q6ZST2 131 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 DENND5BQ6ZUT9 1274 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 TTC7BQ86TV6 843 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 TTC30AQ86WT1 665 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 CDKL3Q8IVW4 592 aaPredicted RBP5.51□□□□□ -1.53
VAPA-203ENST00000577539 TTC30BQ8N4P2 665 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 CLEC4CQ8WTT0 213 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 NDRG1Q92597 394 aaKnown RBP5.51□□□□□ -1.53
VAPA-203ENST00000577539 C18orf25Q96B23 403 aaPredicted RBP5.51□□□□□ -1.53
VAPA-203ENST00000577539 TRIM8Q9BZR9 551 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 SNX25Q9H3E2 840 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 RNF181Q9P0P0 153 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 TXNDC16Q9P2K2 825 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 NKX1-2Q9UD57 310 aaPredicted RBP5.51□□□□□ -1.53
VAPA-203ENST00000577539 ITGA11Q9UKX5 1188 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 E7ESA3 106 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 CXCL11O14625 94 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 CHADO15335 359 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 PAPSS1O43252 624 aaPredicted RBP5.51□□□□□ -1.53
VAPA-203ENST00000577539 CCDC22O60826 627 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 SKAP2O75563 359 aaPredicted RBP5.51□□□□□ -1.53
VAPA-203ENST00000577539 SPAG6O75602 509 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 CNMDO75829 334 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 ENO1P06733 434 aaKnown RBP5.51□□□□□ -1.53
VAPA-203ENST00000577539 T-ENOLP0DO92 83 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 YY1P25490 414 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 PTPN4P29074 926 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 GRIA2P42262 883 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 AFF1P51825 1210 aaKnown RBP5.51□□□□□ -1.53
VAPA-203ENST00000577539 SNX16P57768 344 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms