RNA–Protein interactions for RNA: ENST00000575671.5

TRAP1-212, Transcript of TNF receptor associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene TRAP1, Length 2,309 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-212ENST00000575671 TFAP2DQ7Z6R9 452 aa13.01□□□□□ -0.33
TRAP1-212ENST00000575671 PRPF39Q86UA1 669 aaKnown RBP13.01□□□□□ -0.33
TRAP1-212ENST00000575671 TRABD2AQ86V40 505 aa13.01□□□□□ -0.33
TRAP1-212ENST00000575671 RNF168Q8IYW5 571 aaPredicted RBP13.01□□□□□ -0.33
TRAP1-212ENST00000575671 ANKLE1Q8NAG6 615 aa13.01□□□□□ -0.33
TRAP1-212ENST00000575671 USP33Q8TEY7 942 aa13.01□□□□□ -0.33
TRAP1-212ENST00000575671 DYDC1Q8WWB3 177 aa13.01□□□□□ -0.33
TRAP1-212ENST00000575671 ZNF689Q96CS4 500 aaPredicted RBP13.01□□□□□ -0.33
TRAP1-212ENST00000575671 LRRC39Q96DD0 335 aa13.01□□□□□ -0.33
TRAP1-212ENST00000575671 SIGLEC10Q96LC7 697 aa13.01□□□□□ -0.33
TRAP1-212ENST00000575671 ACTR5Q9H9F9 607 aaPredicted RBP13.01□□□□□ -0.33
TRAP1-212ENST00000575671 CD248Q9HCU0 757 aa13.01□□□□□ -0.33
TRAP1-212ENST00000575671 EIF2B3Q9NR50 452 aaKnown RBP13.01□□□□□ -0.33
TRAP1-212ENST00000575671 TTLL3Q9Y4R7 772 aa13.01□□□□□ -0.33
TRAP1-212ENST00000575671 BACE2Q9Y5Z0 518 aa13.01□□□□□ -0.33
TRAP1-212ENST00000575671 SPAG7O75391 227 aa13.01□□□□□ -0.33
TRAP1-212ENST00000575671 ZNF189O75820 626 aaPredicted RBP13.01□□□□□ -0.33
TRAP1-212ENST00000575671 DNAJB2P25686 324 aa13.01□□□□□ -0.33
TRAP1-212ENST00000575671 STX2P32856 288 aa13.01□□□□□ -0.33
TRAP1-212ENST00000575671 TUFMP49411 452 aaKnown RBP13.01□□□□□ -0.33
TRAP1-212ENST00000575671 COG7P83436 770 aa13.01□□□□□ -0.33
TRAP1-212ENST00000575671 TRIP4Q15650 581 aaPredicted RBP13.01□□□□□ -0.33
TRAP1-212ENST00000575671 TEX44Q53QW1 395 aa13.01□□□□□ -0.33
TRAP1-212ENST00000575671 MS4A13Q5J8X5 152 aa13.01□□□□□ -0.33
TRAP1-212ENST00000575671 ARTNQ5T4W7 220 aa13.01□□□□□ -0.33
TRAP1-212ENST00000575671 UNC5AQ6ZN44 842 aa13.01□□□□□ -0.33
TRAP1-212ENST00000575671 OTOP2Q7RTS6 562 aa13.01□□□□□ -0.33
TRAP1-212ENST00000575671 ARHGAP12Q8IWW6 846 aa13.01□□□□□ -0.33
TRAP1-212ENST00000575671 CTAGE3PQ8IX95 158 aa13.01□□□□□ -0.33
TRAP1-212ENST00000575671 CACNA2D3Q8IZS8 1091 aa13.01□□□□□ -0.33
TRAP1-212ENST00000575671 C4orf33Q8N1A6 199 aa13.01□□□□□ -0.33
TRAP1-212ENST00000575671 CENPTQ96BT3 561 aa13.01□□□□□ -0.33
TRAP1-212ENST00000575671 C1orf74Q96LT6 269 aa13.01□□□□□ -0.33
TRAP1-212ENST00000575671 ZNF512Q96ME7 567 aaPredicted RBP13.01□□□□□ -0.33
TRAP1-212ENST00000575671 EBNA1BP2Q99848 306 aaKnown RBP13.01□□□□□ -0.33
TRAP1-212ENST00000575671 SLC39A8Q9C0K1 460 aa13.01□□□□□ -0.33
TRAP1-212ENST00000575671 TRABDQ9H4I3 376 aa13.01□□□□□ -0.33
TRAP1-212ENST00000575671 FETUBQ9UGM5 382 aa13.01□□□□□ -0.33
TRAP1-212ENST00000575671 GREB1Q4ZG55 1949 aa13.01□□□□□ -0.33
TRAP1-212ENST00000575671 ARHGAP42A6NI28 874 aa13□□□□□ -0.33
TRAP1-212ENST00000575671 USP12O75317 370 aa13□□□□□ -0.33
TRAP1-212ENST00000575671 SEC24AO95486 1093 aa13□□□□□ -0.33
TRAP1-212ENST00000575671 CD68P34810 354 aaPredicted RBP13□□□□□ -0.33
TRAP1-212ENST00000575671 MPP2Q14168 576 aa13□□□□□ -0.33
TRAP1-212ENST00000575671 LRRC8BQ6P9F7 803 aa13□□□□□ -0.33
TRAP1-212ENST00000575671 ADGRD1Q6QNK2 874 aa13□□□□□ -0.33
TRAP1-212ENST00000575671 SLC39A11Q8N1S5 342 aa13□□□□□ -0.33
TRAP1-212ENST00000575671 LZTR1Q8N653 840 aa13□□□□□ -0.33
TRAP1-212ENST00000575671 RTL3Q8N8U3 475 aaKnown RBP13□□□□□ -0.33
TRAP1-212ENST00000575671 ATP6V0D2Q8N8Y2 350 aa13□□□□□ -0.33
TRAP1-212ENST00000575671 GPATCH11Q8N954 259 aa13□□□□□ -0.33
TRAP1-212ENST00000575671 DCAKDQ8WVC6 231 aa13□□□□□ -0.33
TRAP1-212ENST00000575671 AUTS2Q8WXX7 1259 aa13□□□□□ -0.33
TRAP1-212ENST00000575671 BTN2A3PQ96KV6 586 aa13□□□□□ -0.33
TRAP1-212ENST00000575671 SMC6Q96SB8 1091 aa13□□□□□ -0.33
TRAP1-212ENST00000575671 YME1L1Q96TA2 773 aa13□□□□□ -0.33
TRAP1-212ENST00000575671 GORASP1Q9BQQ3 440 aa13□□□□□ -0.33
TRAP1-212ENST00000575671 NACA2Q9H009 215 aa13□□□□□ -0.33
TRAP1-212ENST00000575671 GBA3Q9H227 469 aa13□□□□□ -0.33
TRAP1-212ENST00000575671 CYP4F11Q9HBI6 524 aa13□□□□□ -0.33
TRAP1-212ENST00000575671 PLAC1Q9HBJ0 212 aa13□□□□□ -0.33
TRAP1-212ENST00000575671 UBP1Q9NZI7 540 aa13□□□□□ -0.33
TRAP1-212ENST00000575671 TRHDEQ9UKU6 1024 aa13□□□□□ -0.33
TRAP1-212ENST00000575671 ACTL7BQ9Y614 415 aa13□□□□□ -0.33
TRAP1-212ENST00000575671 A0A1W2PPM1 405 aa13□□□□□ -0.33
TRAP1-212ENST00000575671 INHBAP08476 426 aa13□□□□□ -0.33
TRAP1-212ENST00000575671 MLNP12872 115 aa13□□□□□ -0.33
TRAP1-212ENST00000575671 NFKB1P19838 968 aa13□□□□□ -0.33
TRAP1-212ENST00000575671 MGAT1P26572 445 aa13□□□□□ -0.33
TRAP1-212ENST00000575671 CBLBQ13191 982 aa13□□□□□ -0.33
TRAP1-212ENST00000575671 GKAP1Q5VSY0 366 aaPredicted RBP13□□□□□ -0.33
TRAP1-212ENST00000575671 RAP1GAP2Q684P5 730 aa13□□□□□ -0.33
TRAP1-212ENST00000575671 ITPRIPL1Q6GPH6 555 aa13□□□□□ -0.33
TRAP1-212ENST00000575671 NECAB2Q7Z6G3 386 aa13□□□□□ -0.33
TRAP1-212ENST00000575671 CPLX4Q7Z7G2 160 aa13□□□□□ -0.33
TRAP1-212ENST00000575671 PPM1NQ8N819 430 aa13□□□□□ -0.33
TRAP1-212ENST00000575671 ZNF461Q8TAF7 563 aa13□□□□□ -0.33
TRAP1-212ENST00000575671 GDAP1Q8TB36 358 aa13□□□□□ -0.33
TRAP1-212ENST00000575671 STAMBPL1Q96FJ0 436 aa13□□□□□ -0.33
TRAP1-212ENST00000575671 DHRS4Q9BTZ2 278 aa13□□□□□ -0.33
TRAP1-212ENST00000575671 UBE2OQ9C0C9 1292 aaKnown RBP13□□□□□ -0.33
TRAP1-212ENST00000575671 COMMD8Q9NX08 183 aa13□□□□□ -0.33
TRAP1-212ENST00000575671 NKIRAS1Q9NYS0 192 aa13□□□□□ -0.33
TRAP1-212ENST00000575671 AFF4Q9UHB7 1163 aaKnown RBP13□□□□□ -0.33
TRAP1-212ENST00000575671 LAMA3Q16787 3333 aa13□□□□□ -0.33
TRAP1-212ENST00000575671 LTBP2Q14767 1821 aa12.99□□□□□ -0.33
TRAP1-212ENST00000575671 SDR42E2A6NKP2 422 aa12.99□□□□□ -0.33
TRAP1-212ENST00000575671 CHUKO15111 745 aa12.99□□□□□ -0.33
TRAP1-212ENST00000575671 HSPA8P11142 646 aaKnown RBP12.99□□□□□ -0.33
TRAP1-212ENST00000575671 CCNB1P14635 433 aa12.99□□□□□ -0.33
TRAP1-212ENST00000575671 NRG1Q02297 640 aaPredicted RBP12.99□□□□□ -0.33
TRAP1-212ENST00000575671 DSG1Q02413 1049 aa12.99□□□□□ -0.33
TRAP1-212ENST00000575671 RASA2Q15283 850 aa12.99□□□□□ -0.33
TRAP1-212ENST00000575671 TAF12Q16514 161 aa12.99□□□□□ -0.33
TRAP1-212ENST00000575671 TMEM199Q8N511 208 aa12.99□□□□□ -0.33
TRAP1-212ENST00000575671 OR52K1Q8NGK4 314 aa12.99□□□□□ -0.33
TRAP1-212ENST00000575671 GSDMBQ8TAX9 411 aa12.99□□□□□ -0.33
TRAP1-212ENST00000575671 TEKT5Q96M29 485 aa12.99□□□□□ -0.33
TRAP1-212ENST00000575671 VAT1Q99536 393 aa12.99□□□□□ -0.33
TRAP1-212ENST00000575671 TTLL2Q9BWV7 592 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms