RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 IL17AQ16552 155 aa5.42□□□□□ -1.54
SCAF11-214ENST00000550893 TMEM266Q2M3C6 531 aa5.42□□□□□ -1.54
SCAF11-214ENST00000550893 NOMO2Q5JPE7 1267 aa5.42□□□□□ -1.54
SCAF11-214ENST00000550893 ABHD17BQ5VST6 288 aa5.42□□□□□ -1.54
SCAF11-214ENST00000550893 PLA2G4FQ68DD2 849 aa5.42□□□□□ -1.54
SCAF11-214ENST00000550893 MOXD1Q6UVY6 613 aa5.42□□□□□ -1.54
SCAF11-214ENST00000550893 LRRC71Q8N4P6 559 aa5.42□□□□□ -1.54
SCAF11-214ENST00000550893 FITM2Q8N6M3 262 aa5.42□□□□□ -1.54
SCAF11-214ENST00000550893 PHOSPHO2Q8TCD6 241 aa5.42□□□□□ -1.54
SCAF11-214ENST00000550893 LINC00476Q8WZB0 136 aa5.42□□□□□ -1.54
SCAF11-214ENST00000550893 TOP1MTQ969P6 601 aa5.42□□□□□ -1.54
SCAF11-214ENST00000550893 RNF31Q96EP0 1072 aa5.42□□□□□ -1.54
SCAF11-214ENST00000550893 MARS2Q96GW9 593 aaKnown RBP5.42□□□□□ -1.54
SCAF11-214ENST00000550893 TMX3Q96JJ7 454 aa5.42□□□□□ -1.54
SCAF11-214ENST00000550893 CDHR1Q96JP9 859 aa5.42□□□□□ -1.54
SCAF11-214ENST00000550893 TEKT5Q96M29 485 aa5.42□□□□□ -1.54
SCAF11-214ENST00000550893 MTMR9Q96QG7 549 aa5.42□□□□□ -1.54
SCAF11-214ENST00000550893 FAM49AQ9H0Q0 323 aaPredicted RBP5.42□□□□□ -1.54
SCAF11-214ENST00000550893 C11orf54Q9H0W9 315 aaPredicted RBP5.42□□□□□ -1.54
SCAF11-214ENST00000550893 SMARCAD1Q9H4L7 1026 aa5.42□□□□□ -1.54
SCAF11-214ENST00000550893 MINDY3Q9H8M7 445 aa5.42□□□□□ -1.54
SCAF11-214ENST00000550893 USP25Q9UHP3 1055 aa5.42□□□□□ -1.54
SCAF11-214ENST00000550893 LIMCH1Q9UPQ0 1083 aa5.42□□□□□ -1.54
SCAF11-214ENST00000550893 IPPQ9Y573 584 aa5.42□□□□□ -1.54
SCAF11-214ENST00000550893 NOX1Q9Y5S8 564 aa5.42□□□□□ -1.54
SCAF11-214ENST00000550893 KIF26AQ9ULI4 1882 aaPredicted RBP5.41□□□□□ -1.54
SCAF11-214ENST00000550893 CCDC196A0A1B0GTZ2 297 aa5.41□□□□□ -1.54
SCAF11-214ENST00000550893 CDHR4A6H8M9 788 aa5.41□□□□□ -1.54
SCAF11-214ENST00000550893 HTRA2O43464 458 aaPredicted RBP5.41□□□□□ -1.54
SCAF11-214ENST00000550893 CSDE1O75534 798 aaKnown RBP5.41□□□□□ -1.54
SCAF11-214ENST00000550893 GPANK1O95872 356 aa5.41□□□□□ -1.54
SCAF11-214ENST00000550893 MMP1P03956 469 aa5.41□□□□□ -1.54
SCAF11-214ENST00000550893 VTNP04004 478 aa5.41□□□□□ -1.54
SCAF11-214ENST00000550893 HKR1P10072 659 aa5.41□□□□□ -1.54
SCAF11-214ENST00000550893 ITGAMP11215 1152 aa5.41□□□□□ -1.54
SCAF11-214ENST00000550893 TGM1P22735 817 aa5.41□□□□□ -1.54
SCAF11-214ENST00000550893 KLRC1P26715 233 aa5.41□□□□□ -1.54
SCAF11-214ENST00000550893 ADRA1BP35368 520 aa5.41□□□□□ -1.54
SCAF11-214ENST00000550893 AVPR1BP47901 424 aa5.41□□□□□ -1.54
SCAF11-214ENST00000550893 SLC16A1P53985 500 aa5.41□□□□□ -1.54
SCAF11-214ENST00000550893 SEC24CP53992 1094 aa5.41□□□□□ -1.54
SCAF11-214ENST00000550893 CXADRP78310 365 aa5.41□□□□□ -1.54
SCAF11-214ENST00000550893 CDC42EP1Q00587 391 aa5.41□□□□□ -1.54
SCAF11-214ENST00000550893 SETQ01105 290 aaPredicted RBP5.41□□□□□ -1.54
SCAF11-214ENST00000550893 CREMQ03060 361 aa5.41□□□□□ -1.54
SCAF11-214ENST00000550893 BRDTQ58F21 947 aaPredicted RBP5.41□□□□□ -1.54
SCAF11-214ENST00000550893 CLLU1OSQ5K130 101 aa5.41□□□□□ -1.54
SCAF11-214ENST00000550893 PPP4R3AQ6IN85 833 aa5.41□□□□□ -1.54
SCAF11-214ENST00000550893 SWSAP1Q6NVH7 229 aa5.41□□□□□ -1.54
SCAF11-214ENST00000550893 OLFML1Q6UWY5 402 aa5.41□□□□□ -1.54
SCAF11-214ENST00000550893 TSHZ1Q6ZSZ6 1077 aa5.41□□□□□ -1.54
SCAF11-214ENST00000550893 GPR149Q86SP6 731 aa5.41□□□□□ -1.54
SCAF11-214ENST00000550893 RSPH3Q86UC2 560 aa5.41□□□□□ -1.54
SCAF11-214ENST00000550893 TMEM173Q86WV6 379 aaPredicted RBP5.41□□□□□ -1.54
SCAF11-214ENST00000550893 FAM177A1Q8N128 213 aaPredicted RBP5.41□□□□□ -1.54
SCAF11-214ENST00000550893 CCDC148Q8NFR7 591 aa5.41□□□□□ -1.54
SCAF11-214ENST00000550893 VN1R2Q8NFZ6 395 aa5.41□□□□□ -1.54
SCAF11-214ENST00000550893 CAVIN3Q969G5 261 aa5.41□□□□□ -1.54
SCAF11-214ENST00000550893 HDAC10Q969S8 669 aa5.41□□□□□ -1.54
SCAF11-214ENST00000550893 NACC2Q96BF6 587 aa5.41□□□□□ -1.54
SCAF11-214ENST00000550893 ZNF668Q96K58 619 aaPredicted RBP5.41□□□□□ -1.54
SCAF11-214ENST00000550893 COQ10AQ96MF6 247 aa5.41□□□□□ -1.54
SCAF11-214ENST00000550893 RIT2Q99578 217 aa5.41□□□□□ -1.54
SCAF11-214ENST00000550893 ZNF577Q9BSK1 485 aa5.41□□□□□ -1.54
SCAF11-214ENST00000550893 VN1R3Q9BXE9 311 aa5.41□□□□□ -1.54
SCAF11-214ENST00000550893 IFIH1Q9BYX4 1025 aaKnown RBP5.41□□□□□ -1.54
SCAF11-214ENST00000550893 CXCL16Q9H2A7 254 aa5.41□□□□□ -1.54
SCAF11-214ENST00000550893 C6orf50Q9HD87 102 aa5.41□□□□□ -1.54
SCAF11-214ENST00000550893 ZNF302Q9NR11 478 aa5.41□□□□□ -1.54
SCAF11-214ENST00000550893 TDP1Q9NUW8 608 aa5.41□□□□□ -1.54
SCAF11-214ENST00000550893 ORC3Q9UBD5 711 aaPredicted RBP5.41□□□□□ -1.54
SCAF11-214ENST00000550893 GABBR1Q9UBS5 961 aa5.41□□□□□ -1.54
SCAF11-214ENST00000550893 ZNF215Q9UL58 517 aaPredicted RBP5.41□□□□□ -1.54
SCAF11-214ENST00000550893 NAP1L2Q9ULW6 460 aaPredicted RBP5.41□□□□□ -1.54
SCAF11-214ENST00000550893 PADI3Q9ULW8 664 aa5.41□□□□□ -1.54
SCAF11-214ENST00000550893 TRPV2Q9Y5S1 764 aa5.41□□□□□ -1.54
SCAF11-214ENST00000550893 ADGRA3Q8IWK6 1321 aa5.41□□□□□ -1.54
SCAF11-214ENST00000550893 OBSL1O75147 1896 aa5.41□□□□□ -1.54
SCAF11-214ENST00000550893 A0A087WWV3 80 aa5.4□□□□□ -1.54
SCAF11-214ENST00000550893 ALG1L2C9J202 215 aa5.4□□□□□ -1.54
SCAF11-214ENST00000550893 C5orf67F2Z3F1 127 aa5.4□□□□□ -1.54
SCAF11-214ENST00000550893 GRM6O15303 877 aa5.4□□□□□ -1.54
SCAF11-214ENST00000550893 CHMP2AO43633 222 aa5.4□□□□□ -1.54
SCAF11-214ENST00000550893 HBP1O60381 514 aa5.4□□□□□ -1.54
SCAF11-214ENST00000550893 GLP2RO95838 553 aa5.4□□□□□ -1.54
SCAF11-214ENST00000550893 SLC6A4P31645 630 aa5.4□□□□□ -1.54
SCAF11-214ENST00000550893 GPC3P51654 580 aa5.4□□□□□ -1.54
SCAF11-214ENST00000550893 KRT85P78386 507 aa5.4□□□□□ -1.54
SCAF11-214ENST00000550893 FOXI1Q12951 378 aa5.4□□□□□ -1.54
SCAF11-214ENST00000550893 IL10RAQ13651 578 aa5.4□□□□□ -1.54
SCAF11-214ENST00000550893 ODF1Q14990 250 aa5.4□□□□□ -1.54
SCAF11-214ENST00000550893 C3orf36Q3SXR2 165 aa5.4□□□□□ -1.54
SCAF11-214ENST00000550893 EPC2Q52LR7 807 aa5.4□□□□□ -1.54
SCAF11-214ENST00000550893 LRCH2Q5VUJ6 765 aa5.4□□□□□ -1.54
SCAF11-214ENST00000550893 TAF2Q6P1X5 1199 aa5.4□□□□□ -1.54
SCAF11-214ENST00000550893 SYNE3Q6ZMZ3 975 aa5.4□□□□□ -1.54
SCAF11-214ENST00000550893 PIK3AP1Q6ZUJ8 805 aa5.4□□□□□ -1.54
SCAF11-214ENST00000550893 ADGRD2Q7Z7M1 963 aa5.4□□□□□ -1.54
SCAF11-214ENST00000550893 NEK8Q86SG6 692 aa5.4□□□□□ -1.54
SCAF11-214ENST00000550893 CCDC83Q8IWF9 413 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms