RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 KLF2Q9Y5W3 355 aaPredicted RBP0.95□□□□□ -2.26
COPB1-212ENST00000534771 NFS1Q9Y697 457 aa0.95□□□□□ -2.26
COPB1-212ENST00000534771 TP53BP1Q12888 1972 aaPredicted RBP0.95□□□□□ -2.26
COPB1-212ENST00000534771 IGLV5-37A0A075B6J1 123 aa0.94□□□□□ -2.26
COPB1-212ENST00000534771 LINC01553A4QN01 128 aa0.94□□□□□ -2.26
COPB1-212ENST00000534771 CFAP69A5D8W1 941 aa0.94□□□□□ -2.26
COPB1-212ENST00000534771 CXorf65A6NEN9 183 aa0.94□□□□□ -2.26
COPB1-212ENST00000534771 CAPN8A6NHC0 703 aa0.94□□□□□ -2.26
COPB1-212ENST00000534771 TULP2O00295 520 aa0.94□□□□□ -2.26
COPB1-212ENST00000534771 ZSCAN9O15535 394 aaPredicted RBP0.94□□□□□ -2.26
COPB1-212ENST00000534771 EDIL3O43854 480 aa0.94□□□□□ -2.26
COPB1-212ENST00000534771 XPNPEP2O43895 674 aa0.94□□□□□ -2.26
COPB1-212ENST00000534771 CNTN5O94779 1100 aa0.94□□□□□ -2.26
COPB1-212ENST00000534771 SOX30O94993 753 aa0.94□□□□□ -2.26
COPB1-212ENST00000534771 CRYAAP02489 173 aa0.94□□□□□ -2.26
COPB1-212ENST00000534771 AMBPP02760 352 aa0.94□□□□□ -2.26
COPB1-212ENST00000534771 CT47B1P0C2W7 299 aaPredicted RBP0.94□□□□□ -2.26
COPB1-212ENST00000534771 PF4V1P10720 104 aa0.94□□□□□ -2.26
COPB1-212ENST00000534771 ALADP13716 330 aa0.94□□□□□ -2.26
COPB1-212ENST00000534771 IL1R1P14778 569 aa0.94□□□□□ -2.26
COPB1-212ENST00000534771 HSPA6P17066 643 aa0.94□□□□□ -2.26
COPB1-212ENST00000534771 ZNF10P21506 573 aaPredicted RBP0.94□□□□□ -2.26
COPB1-212ENST00000534771 GNLYP22749 145 aa0.94□□□□□ -2.26
COPB1-212ENST00000534771 DGKAP23743 735 aa0.94□□□□□ -2.26
COPB1-212ENST00000534771 ATICP31939 592 aa0.94□□□□□ -2.26
COPB1-212ENST00000534771 GSTM5P46439 218 aa0.94□□□□□ -2.26
COPB1-212ENST00000534771 CARSP49589 748 aaKnown RBP0.94□□□□□ -2.26
COPB1-212ENST00000534771 CDKN1CP49918 316 aaPredicted RBP0.94□□□□□ -2.26
COPB1-212ENST00000534771 CSRP3P50461 194 aa0.94□□□□□ -2.26
COPB1-212ENST00000534771 SLC37A1P57057 533 aa0.94□□□□□ -2.26
COPB1-212ENST00000534771 BNC1Q01954 994 aa0.94□□□□□ -2.26
COPB1-212ENST00000534771 SNTA1Q13424 505 aa0.94□□□□□ -2.26
COPB1-212ENST00000534771 ACCSLQ4AC99 568 aa0.94□□□□□ -2.26
COPB1-212ENST00000534771 TMEM196Q5HYL7 178 aa0.94□□□□□ -2.26
COPB1-212ENST00000534771 PLA2G4FQ68DD2 849 aa0.94□□□□□ -2.26
COPB1-212ENST00000534771 CCDC144NLQ6NUI1 221 aa0.94□□□□□ -2.26
COPB1-212ENST00000534771 GIMAP6Q6P9H5 292 aa0.94□□□□□ -2.26
COPB1-212ENST00000534771 UNQ6126/PRO20091Q6UXV3 157 aa0.94□□□□□ -2.26
COPB1-212ENST00000534771 MARK2Q7KZI7 788 aaKnown RBP0.94□□□□□ -2.26
COPB1-212ENST00000534771 MON1BQ7L1V2 547 aa0.94□□□□□ -2.26
COPB1-212ENST00000534771 ZBTB46Q86UZ6 589 aa0.94□□□□□ -2.26
COPB1-212ENST00000534771 PALB2Q86YC2 1186 aa0.94□□□□□ -2.26
COPB1-212ENST00000534771 DPP10Q8N608 796 aa0.94□□□□□ -2.26
COPB1-212ENST00000534771 PRPF38AQ8NAV1 312 aaKnown RBP0.94□□□□□ -2.26
COPB1-212ENST00000534771 ADPRHL1Q8NDY3 354 aa0.94□□□□□ -2.26
COPB1-212ENST00000534771 PPP1R35Q8TAP8 253 aa0.94□□□□□ -2.26
COPB1-212ENST00000534771 SLC35G2Q8TBE7 412 aa0.94□□□□□ -2.26
COPB1-212ENST00000534771 USP13Q92995 863 aaPredicted RBP0.94□□□□□ -2.26
COPB1-212ENST00000534771 BICD1Q96G01 975 aa0.94□□□□□ -2.26
COPB1-212ENST00000534771 SCMH1Q96GD3 660 aa0.94□□□□□ -2.26
COPB1-212ENST00000534771 ZNF333Q96JL9 665 aa0.94□□□□□ -2.26
COPB1-212ENST00000534771 FEM1CQ96JP0 617 aa0.94□□□□□ -2.26
COPB1-212ENST00000534771 EIF3CQ99613 913 aaKnown RBP0.94□□□□□ -2.26
COPB1-212ENST00000534771 MOV10L1Q9BXT6 1211 aaKnown RBP0.94□□□□□ -2.26
COPB1-212ENST00000534771 BARHL1Q9BZE3 327 aa0.94□□□□□ -2.26
COPB1-212ENST00000534771 C22orf23Q9BZE7 217 aa0.94□□□□□ -2.26
COPB1-212ENST00000534771 ASPSCR1Q9BZE9 553 aa0.94□□□□□ -2.26
COPB1-212ENST00000534771 GAREM1Q9H706 876 aa0.94□□□□□ -2.26
COPB1-212ENST00000534771 ZBTB26Q9HCK0 441 aa0.94□□□□□ -2.26
COPB1-212ENST00000534771 ZNF304Q9HCX3 659 aa0.94□□□□□ -2.26
COPB1-212ENST00000534771 SLC7A10Q9NS82 523 aa0.94□□□□□ -2.26
COPB1-212ENST00000534771 IP6K2Q9UHH9 426 aa0.94□□□□□ -2.26
COPB1-212ENST00000534771 OGDHLQ9ULD0 1010 aa0.94□□□□□ -2.26
COPB1-212ENST00000534771 KIF26BQ2KJY2 2108 aa0.94□□□□□ -2.26
COPB1-212ENST00000534771 TRBV5-7A0A0A0MS05 114 aa0.93□□□□□ -2.26
COPB1-212ENST00000534771 IGHV4-28A0A0C4DH34 117 aa0.93□□□□□ -2.26
COPB1-212ENST00000534771 KCNJ18B7U540 433 aa0.93□□□□□ -2.26
COPB1-212ENST00000534771 FAM72CH0Y354 149 aa0.93□□□□□ -2.26
COPB1-212ENST00000534771 EYA2O00167 538 aa0.93□□□□□ -2.26
COPB1-212ENST00000534771 P2RY10O00398 339 aa0.93□□□□□ -2.26
COPB1-212ENST00000534771 KIF3BO15066 747 aa0.93□□□□□ -2.26
COPB1-212ENST00000534771 PRPF3O43395 683 aaKnown RBP0.93□□□□□ -2.26
COPB1-212ENST00000534771 FGF17O60258 216 aa0.93□□□□□ -2.26
COPB1-212ENST00000534771 CTNND1O60716 968 aaKnown RBP0.93□□□□□ -2.26
COPB1-212ENST00000534771 TUSC2O75896 110 aa0.93□□□□□ -2.26
COPB1-212ENST00000534771 KAT7O95251 611 aa0.93□□□□□ -2.26
COPB1-212ENST00000534771 MT-ND5P03915 603 aa0.93□□□□□ -2.26
COPB1-212ENST00000534771 ATP1A1P05023 1023 aaKnown RBP0.93□□□□□ -2.26
COPB1-212ENST00000534771 ALDOCP09972 364 aaKnown RBP0.93□□□□□ -2.26
COPB1-212ENST00000534771 KLRC2P26717 231 aa0.93□□□□□ -2.26
COPB1-212ENST00000534771 AVPR1AP37288 418 aa0.93□□□□□ -2.26
COPB1-212ENST00000534771 HSD17B4P51659 736 aa0.93□□□□□ -2.26
COPB1-212ENST00000534771 ZNF132P52740 706 aa0.93□□□□□ -2.26
COPB1-212ENST00000534771 SHC2P98077 582 aa0.93□□□□□ -2.26
COPB1-212ENST00000534771 DLG1Q12959 904 aa0.93□□□□□ -2.26
COPB1-212ENST00000534771 GPS1Q13098 491 aa0.93□□□□□ -2.26
COPB1-212ENST00000534771 MYBPHQ13203 477 aa0.93□□□□□ -2.26
COPB1-212ENST00000534771 CBFBQ13951 182 aa0.93□□□□□ -2.26
COPB1-212ENST00000534771 KRT72Q14CN4 511 aa0.93□□□□□ -2.26
COPB1-212ENST00000534771 P3H1Q32P28 736 aa0.93□□□□□ -2.26
COPB1-212ENST00000534771 FAM72AQ5TYM5 149 aa0.93□□□□□ -2.26
COPB1-212ENST00000534771 ABLIM2Q6H8Q1 611 aa0.93□□□□□ -2.26
COPB1-212ENST00000534771 FAM72DQ6L9T8 149 aa0.93□□□□□ -2.26
COPB1-212ENST00000534771 ERAP2Q6P179 960 aa0.93□□□□□ -2.26
COPB1-212ENST00000534771 WDR93Q6P2C0 686 aa0.93□□□□□ -2.26
COPB1-212ENST00000534771 SUSD1Q6UWL2 747 aa0.93□□□□□ -2.26
COPB1-212ENST00000534771 TUBA1AQ71U36 451 aa0.93□□□□□ -2.26
COPB1-212ENST00000534771 RNF44Q7L0R7 432 aa0.93□□□□□ -2.26
COPB1-212ENST00000534771 SLC26A9Q7LBE3 791 aa0.93□□□□□ -2.26
COPB1-212ENST00000534771 KRT28Q7Z3Y7 464 aa0.93□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 135.8 ms