RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 KCTD11Q693B1 232 aa17.26■□□□□ 0.35
SREK1-212ENST00000522912 KIAA1841Q6NSI8 718 aa17.26■□□□□ 0.35
SREK1-212ENST00000522912 TRMT10BQ6PF06 316 aaKnown RBP17.26■□□□□ 0.35
SREK1-212ENST00000522912 CNTD1Q8N815 330 aa17.26■□□□□ 0.35
SREK1-212ENST00000522912 ARNTL2Q8WYA1 636 aa17.26■□□□□ 0.35
SREK1-212ENST00000522912 CHMP6Q96FZ7 201 aa17.26■□□□□ 0.35
SREK1-212ENST00000522912 VAT1Q99536 393 aa17.26■□□□□ 0.35
SREK1-212ENST00000522912 MLPHQ9BV36 600 aaPredicted RBP17.26■□□□□ 0.35
SREK1-212ENST00000522912 UBE2OQ9C0C9 1292 aaKnown RBP17.26■□□□□ 0.35
SREK1-212ENST00000522912 KIAA0100Q14667 2235 aaKnown RBP17.25■□□□□ 0.35
SREK1-212ENST00000522912 SLC12A8A0AV02 714 aa17.25■□□□□ 0.35
SREK1-212ENST00000522912 FAM47DPA6NHR8 397 aa17.25■□□□□ 0.35
SREK1-212ENST00000522912 SDR42E2A6NKP2 422 aa17.25■□□□□ 0.35
SREK1-212ENST00000522912 WASH4PA8MWX3 477 aa17.25■□□□□ 0.35
SREK1-212ENST00000522912 PRPF4O43172 522 aaKnown RBP eCLIP17.25■□□□□ 0.352e-6■□□□□ 9.3
SREK1-212ENST00000522912 AP2A1O95782 977 aa17.25■□□□□ 0.35
SREK1-212ENST00000522912 TIMP1P01033 207 aa17.25■□□□□ 0.35
SREK1-212ENST00000522912 IGLV3-27P01718 113 aa17.25■□□□□ 0.35
SREK1-212ENST00000522912 SOD2P04179 222 aa17.25■□□□□ 0.35
SREK1-212ENST00000522912 STEAP4Q687X5 459 aa17.25■□□□□ 0.35
SREK1-212ENST00000522912 SLC39A11Q8N1S5 342 aa17.25■□□□□ 0.35
SREK1-212ENST00000522912 ATPAF2Q8N5M1 289 aa17.25■□□□□ 0.35
SREK1-212ENST00000522912 ATP6V0D2Q8N8Y2 350 aa17.25■□□□□ 0.35
SREK1-212ENST00000522912 ANKLE1Q8NAG6 615 aa17.25■□□□□ 0.35
SREK1-212ENST00000522912 USP33Q8TEY7 942 aa17.25■□□□□ 0.35
SREK1-212ENST00000522912 STAMBPL1Q96FJ0 436 aa17.25■□□□□ 0.35
SREK1-212ENST00000522912 ZNF558Q96NG5 402 aa17.25■□□□□ 0.35
SREK1-212ENST00000522912 NOL6Q9H6R4 1146 aaKnown RBP17.25■□□□□ 0.35
SREK1-212ENST00000522912 PRDM5Q9NQX1 630 aaPredicted RBP17.25■□□□□ 0.35
SREK1-212ENST00000522912 PTPRSQ13332 1948 aa17.25■□□□□ 0.35
SREK1-212ENST00000522912 TLR5O60602 858 aa17.25■□□□□ 0.35
SREK1-212ENST00000522912 MAFKO60675 156 aa17.25■□□□□ 0.35
SREK1-212ENST00000522912 FAM155BO75949 473 aa17.25■□□□□ 0.35
SREK1-212ENST00000522912 SUN1O94901 812 aa17.25■□□□□ 0.35
SREK1-212ENST00000522912 PPM1NQ8N819 430 aa17.25■□□□□ 0.35
SREK1-212ENST00000522912 GSDMBQ8TAX9 411 aa17.25■□□□□ 0.35
SREK1-212ENST00000522912 GDAP1Q8TB36 358 aa17.25■□□□□ 0.35
SREK1-212ENST00000522912 DENND1AQ8TEH3 1009 aa17.25■□□□□ 0.35
SREK1-212ENST00000522912 ZNF419Q96HQ0 510 aaPredicted RBP17.25■□□□□ 0.35
SREK1-212ENST00000522912 BTN2A3PQ96KV6 586 aa17.25■□□□□ 0.35
SREK1-212ENST00000522912 SMC6Q96SB8 1091 aa17.25■□□□□ 0.35
SREK1-212ENST00000522912 NKIRAS1Q9NYS0 192 aa17.25■□□□□ 0.35
SREK1-212ENST00000522912 AFF4Q9UHB7 1163 aaKnown RBP17.25■□□□□ 0.35
SREK1-212ENST00000522912 ARHGAP42A6NI28 874 aa17.24■□□□□ 0.35
SREK1-212ENST00000522912 USP12O75317 370 aa17.24■□□□□ 0.35
SREK1-212ENST00000522912 INHBAP08476 426 aa17.24■□□□□ 0.35
SREK1-212ENST00000522912 CCNB1P14635 433 aa17.24■□□□□ 0.35
SREK1-212ENST00000522912 TUFMP49411 452 aaKnown RBP17.24■□□□□ 0.35
SREK1-212ENST00000522912 WDR4P57081 412 aaKnown RBP17.24■□□□□ 0.35
SREK1-212ENST00000522912 WDR5P61964 334 aaKnown RBP17.24■□□□□ 0.35
SREK1-212ENST00000522912 DSG1Q02413 1049 aa17.24■□□□□ 0.35
SREK1-212ENST00000522912 ITPRIPL1Q6GPH6 555 aa17.24■□□□□ 0.35
SREK1-212ENST00000522912 OTOP3Q7RTS5 596 aa17.24■□□□□ 0.35
SREK1-212ENST00000522912 CTAGE3PQ8IX95 158 aa17.24■□□□□ 0.35
SREK1-212ENST00000522912 OR52K1Q8NGK4 314 aa17.24■□□□□ 0.35
SREK1-212ENST00000522912 DYDC1Q8WWB3 177 aa17.24■□□□□ 0.35
SREK1-212ENST00000522912 SYBUQ9NX95 663 aa17.24■□□□□ 0.35
SREK1-212ENST00000522912 KIAA1671Q9BY89 1806 aa17.23■□□□□ 0.35
SREK1-212ENST00000522912 FAM159BA6NKW6 160 aa17.23■□□□□ 0.35
SREK1-212ENST00000522912 TYROBPO43914 113 aa17.23■□□□□ 0.35
SREK1-212ENST00000522912 UGT1A9O60656 530 aa17.23■□□□□ 0.35
SREK1-212ENST00000522912 CNTN5O94779 1100 aa17.23■□□□□ 0.35
SREK1-212ENST00000522912 ABLIM3O94929 683 aa17.23■□□□□ 0.35
SREK1-212ENST00000522912 ACRP10323 421 aa17.23■□□□□ 0.35
SREK1-212ENST00000522912 KRT4P19013 534 aa17.23■□□□□ 0.35
SREK1-212ENST00000522912 ALFQ53S48 1182 aa17.23■□□□□ 0.35
SREK1-212ENST00000522912 RAP1GAP2Q684P5 730 aa17.23■□□□□ 0.35
SREK1-212ENST00000522912 CASC4Q6P4E1 433 aa17.23■□□□□ 0.35
SREK1-212ENST00000522912 SLC26A11Q86WA9 606 aa17.23■□□□□ 0.35
SREK1-212ENST00000522912 LRRC6Q86X45 466 aa17.23■□□□□ 0.35
SREK1-212ENST00000522912 LRRC34Q8IZ02 419 aa17.23■□□□□ 0.35
SREK1-212ENST00000522912 CKAP2Q8WWK9 683 aa17.23■□□□□ 0.35
SREK1-212ENST00000522912 IL12RB2Q99665 862 aa17.23■□□□□ 0.35
SREK1-212ENST00000522912 UGT1A7Q9HAW7 530 aa17.23■□□□□ 0.35
SREK1-212ENST00000522912 UGT1A10Q9HAW8 530 aa17.23■□□□□ 0.35
SREK1-212ENST00000522912 UGT1A8Q9HAW9 530 aa17.23■□□□□ 0.35
SREK1-212ENST00000522912 MOCS1Q9NZB8 636 aa17.23■□□□□ 0.35
SREK1-212ENST00000522912 IKBKGQ9Y6K9 419 aa17.23■□□□□ 0.35
SREK1-212ENST00000522912 IGLV3-10A0A075B6K4 115 aa17.23■□□□□ 0.35
SREK1-212ENST00000522912 MATN3O15232 486 aa17.23■□□□□ 0.35
SREK1-212ENST00000522912 CSH1P0DML2 217 aa17.23■□□□□ 0.35
SREK1-212ENST00000522912 CSH2P0DML3 217 aa17.23■□□□□ 0.35
SREK1-212ENST00000522912 RHOQP17081 205 aa17.23■□□□□ 0.35
SREK1-212ENST00000522912 RPA3P35244 121 aaPredicted RBP17.23■□□□□ 0.35
SREK1-212ENST00000522912 PAPOLAP51003 745 aaKnown RBP17.23■□□□□ 0.35
SREK1-212ENST00000522912 SLC18A1P54219 525 aa17.23■□□□□ 0.35
SREK1-212ENST00000522912 RING1Q06587 406 aa17.23■□□□□ 0.35
SREK1-212ENST00000522912 BTG3Q14201 252 aaPredicted RBP17.23■□□□□ 0.35
SREK1-212ENST00000522912 FBXL22Q6P050 247 aa17.23■□□□□ 0.35
SREK1-212ENST00000522912 TFAP2DQ7Z6R9 452 aa17.23■□□□□ 0.35
SREK1-212ENST00000522912 TAX1BP1Q86VP1 789 aa17.23■□□□□ 0.35
SREK1-212ENST00000522912 UNC5BQ8IZJ1 945 aa17.23■□□□□ 0.35
SREK1-212ENST00000522912 ZNF461Q8TAF7 563 aa17.23■□□□□ 0.35
SREK1-212ENST00000522912 IGSF8Q969P0 613 aa17.23■□□□□ 0.35
SREK1-212ENST00000522912 TMEM169Q96HH4 297 aa17.23■□□□□ 0.35
SREK1-212ENST00000522912 OXNAD1Q96HP4 312 aaPredicted RBP17.23■□□□□ 0.35
SREK1-212ENST00000522912 CEP295NLQ96MC4 621 aa17.23■□□□□ 0.35
SREK1-212ENST00000522912 HERC2P3Q9BVR0 1158 aa17.23■□□□□ 0.35
SREK1-212ENST00000522912 ZYG11BQ9C0D3 744 aa17.23■□□□□ 0.35
SREK1-212ENST00000522912 CASS4Q9NQ75 786 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms