RNA–Protein interactions for RNA: ENST00000522227.5

CTNNA1-234, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-234ENST00000522227 ZNF699Q32M78 642 aa11.45□□□□□ -0.58
CTNNA1-234ENST00000522227 FHL5Q5TD97 284 aa11.45□□□□□ -0.58
CTNNA1-234ENST00000522227 ZCCHC8Q6NZY4 707 aaKnown RBP11.45□□□□□ -0.58
CTNNA1-234ENST00000522227 MMS22LQ6ZRQ5 1243 aa11.45□□□□□ -0.58
CTNNA1-234ENST00000522227 FAM217AQ8IXS0 508 aa11.45□□□□□ -0.58
CTNNA1-234ENST00000522227 TPCN2Q8NHX9 752 aa11.45□□□□□ -0.58
CTNNA1-234ENST00000522227 ZNF516Q92618 1163 aa11.45□□□□□ -0.58
CTNNA1-234ENST00000522227 SYAP1Q96A49 352 aaPredicted RBP11.45□□□□□ -0.58
CTNNA1-234ENST00000522227 RPL10LQ96L21 214 aaKnown RBP11.45□□□□□ -0.58
CTNNA1-234ENST00000522227 CCDC3Q9BQI4 270 aa11.45□□□□□ -0.58
CTNNA1-234ENST00000522227 XYLT2Q9H1B5 865 aa11.45□□□□□ -0.58
CTNNA1-234ENST00000522227 SLCO3A1Q9UIG8 710 aa11.45□□□□□ -0.58
CTNNA1-234ENST00000522227 TPX2Q9ULW0 747 aaKnown RBP11.45□□□□□ -0.58
CTNNA1-234ENST00000522227 ERVW-1Q9UQF0 538 aa11.45□□□□□ -0.58
CTNNA1-234ENST00000522227 PCDHB11Q9Y5F2 797 aa11.45□□□□□ -0.58
CTNNA1-234ENST00000522227 EDDM13A0A1B0GTR0 161 aa11.44□□□□□ -0.58
CTNNA1-234ENST00000522227 EME2A4GXA9 379 aaPredicted RBP11.44□□□□□ -0.58
CTNNA1-234ENST00000522227 RNGTTO60942 597 aaKnown RBP11.44□□□□□ -0.58
CTNNA1-234ENST00000522227 TCEA3O75764 348 aa11.44□□□□□ -0.58
CTNNA1-234ENST00000522227 GNLYP22749 145 aa11.44□□□□□ -0.58
CTNNA1-234ENST00000522227 DCTP40126 519 aa11.44□□□□□ -0.58
CTNNA1-234ENST00000522227 MAPK10P53779 464 aa11.44□□□□□ -0.58
CTNNA1-234ENST00000522227 BIRC3Q13489 604 aa11.44□□□□□ -0.58
CTNNA1-234ENST00000522227 ZNF667Q5HYK9 610 aa11.44□□□□□ -0.58
CTNNA1-234ENST00000522227 PTAR1Q7Z6K3 402 aaPredicted RBP11.44□□□□□ -0.58
CTNNA1-234ENST00000522227 MFN1Q8IWA4 741 aa11.44□□□□□ -0.58
CTNNA1-234ENST00000522227 SLC22A18ASQ8N1D0 253 aa11.44□□□□□ -0.58
CTNNA1-234ENST00000522227 CARNMT1Q8N4J0 409 aa11.44□□□□□ -0.58
CTNNA1-234ENST00000522227 ZNF548Q8NEK5 533 aaPredicted RBP11.44□□□□□ -0.58
CTNNA1-234ENST00000522227 C9orf43Q8TAL5 461 aaPredicted RBP11.44□□□□□ -0.58
CTNNA1-234ENST00000522227 LMX1AQ8TE12 382 aa11.44□□□□□ -0.58
CTNNA1-234ENST00000522227 NDRG1Q92597 394 aaKnown RBP11.44□□□□□ -0.58
CTNNA1-234ENST00000522227 PLD4Q96BZ4 506 aa11.44□□□□□ -0.58
CTNNA1-234ENST00000522227 CDK5RAP1Q96SZ6 601 aaKnown RBP11.44□□□□□ -0.58
CTNNA1-234ENST00000522227 FOXD4L1Q9NU39 408 aa11.44□□□□□ -0.58
CTNNA1-234ENST00000522227 CLIC5Q9NZA1 410 aa11.44□□□□□ -0.58
CTNNA1-234ENST00000522227 FOXJ2Q9P0K8 574 aa11.44□□□□□ -0.58
CTNNA1-234ENST00000522227 SFMBT1Q9UHJ3 866 aa11.44□□□□□ -0.58
CTNNA1-234ENST00000522227 INTS6Q9UL03 887 aaKnown RBP11.44□□□□□ -0.58
CTNNA1-234ENST00000522227 ITPR3Q14573 2671 aa11.44□□□□□ -0.58
CTNNA1-234ENST00000522227 TARSL2A2RTX5 802 aaKnown RBP11.43□□□□□ -0.58
CTNNA1-234ENST00000522227 PLRG1O43660 514 aaKnown RBP11.43□□□□□ -0.58
CTNNA1-234ENST00000522227 SEMA7AO75326 666 aa11.43□□□□□ -0.58
CTNNA1-234ENST00000522227 GAP43P17677 238 aa11.43□□□□□ -0.58
CTNNA1-234ENST00000522227 STK19P49842 368 aaPredicted RBP11.43□□□□□ -0.58
CTNNA1-234ENST00000522227 CYP2J2P51589 502 aa11.43□□□□□ -0.58
CTNNA1-234ENST00000522227 HNRNPKP61978 463 aaKnown RBP eCLIP11.43□□□□□ -0.58
CTNNA1-234ENST00000522227 YWHAGP61981 247 aaKnown RBP eCLIP11.43□□□□□ -0.58
CTNNA1-234ENST00000522227 CNTN1Q12860 1018 aa11.43□□□□□ -0.58
CTNNA1-234ENST00000522227 TRIP4Q15650 581 aaPredicted RBP11.43□□□□□ -0.58
CTNNA1-234ENST00000522227 Q6ZSR6 202 aa11.43□□□□□ -0.58
CTNNA1-234ENST00000522227 CCDC186Q7Z3E2 898 aa11.43□□□□□ -0.58
CTNNA1-234ENST00000522227 TRIM69Q86WT6 500 aa11.43□□□□□ -0.58
CTNNA1-234ENST00000522227 PTPRN2Q92932 1015 aa11.43□□□□□ -0.58
CTNNA1-234ENST00000522227 TTC17Q96AE7 1141 aa11.43□□□□□ -0.58
CTNNA1-234ENST00000522227 CYFIP2Q96F07 1278 aa11.43□□□□□ -0.58
CTNNA1-234ENST00000522227 SLC12A9Q9BXP2 914 aa11.43□□□□□ -0.58
CTNNA1-234ENST00000522227 STRADBQ9C0K7 418 aa11.43□□□□□ -0.58
CTNNA1-234ENST00000522227 PREBQ9HCU5 417 aa11.43□□□□□ -0.58
CTNNA1-234ENST00000522227 A0A1W2PQU0 124 aa11.42□□□□□ -0.58
CTNNA1-234ENST00000522227 MSI1O43347 362 aaKnown RBP11.42□□□□□ -0.58
CTNNA1-234ENST00000522227 EPB41L2O43491 1005 aaKnown RBP11.42□□□□□ -0.58
CTNNA1-234ENST00000522227 ASLP04424 464 aa11.42□□□□□ -0.58
CTNNA1-234ENST00000522227 AKT2P31751 481 aa11.42□□□□□ -0.58
CTNNA1-234ENST00000522227 ATICP31939 592 aa11.42□□□□□ -0.58
CTNNA1-234ENST00000522227 NUDT1P36639 197 aa11.42□□□□□ -0.58
CTNNA1-234ENST00000522227 ETV5P41161 510 aa11.42□□□□□ -0.58
CTNNA1-234ENST00000522227 CASP4P49662 377 aa11.42□□□□□ -0.58
CTNNA1-234ENST00000522227 NEK4P51957 841 aa11.42□□□□□ -0.58
CTNNA1-234ENST00000522227 C1orf61Q13536 156 aa11.42□□□□□ -0.58
CTNNA1-234ENST00000522227 SNRNP35Q16560 246 aaKnown RBP11.42□□□□□ -0.58
CTNNA1-234ENST00000522227 BMT2Q1RMZ1 405 aa11.42□□□□□ -0.58
CTNNA1-234ENST00000522227 PITRM1Q5JRX3 1037 aa11.42□□□□□ -0.58
CTNNA1-234ENST00000522227 ADGRF1Q5T601 910 aa11.42□□□□□ -0.58
CTNNA1-234ENST00000522227 RNF219Q5W0B1 726 aaPredicted RBP11.42□□□□□ -0.58
CTNNA1-234ENST00000522227 SLC35F3Q8IY50 421 aa11.42□□□□□ -0.58
CTNNA1-234ENST00000522227 TMEM145Q8NBT3 493 aa11.42□□□□□ -0.58
CTNNA1-234ENST00000522227 USP7Q93009 1102 aa11.42□□□□□ -0.58
CTNNA1-234ENST00000522227 AK8Q96MA6 479 aa11.42□□□□□ -0.58
CTNNA1-234ENST00000522227 IL12RB2Q99665 862 aa11.42□□□□□ -0.58
CTNNA1-234ENST00000522227 KDM4CQ9H3R0 1056 aa11.42□□□□□ -0.58
CTNNA1-234ENST00000522227 SARDHQ9UL12 918 aa11.42□□□□□ -0.58
CTNNA1-234ENST00000522227 LOXL2Q9Y4K0 774 aa11.42□□□□□ -0.58
CTNNA1-234ENST00000522227 LRBAP50851 2863 aa11.41□□□□□ -0.58
CTNNA1-234ENST00000522227 KIAA0391O15091 583 aaKnown RBP11.41□□□□□ -0.58
CTNNA1-234ENST00000522227 CLIC2O15247 247 aa11.41□□□□□ -0.58
CTNNA1-234ENST00000522227 NVLO15381 856 aaKnown RBP11.41□□□□□ -0.58
CTNNA1-234ENST00000522227 AQP9O43315 295 aa11.41□□□□□ -0.58
CTNNA1-234ENST00000522227 BNIP3LO60238 219 aa11.41□□□□□ -0.58
CTNNA1-234ENST00000522227 STAU1O95793 577 aaKnown RBP11.41□□□□□ -0.58
CTNNA1-234ENST00000522227 NR1D1P20393 614 aa11.41□□□□□ -0.58
CTNNA1-234ENST00000522227 OXCT1P55809 520 aa11.41□□□□□ -0.58
CTNNA1-234ENST00000522227 CCL7P80098 99 aa11.41□□□□□ -0.58
CTNNA1-234ENST00000522227 CYP24A1Q07973 514 aa11.41□□□□□ -0.58
CTNNA1-234ENST00000522227 PSMD6Q15008 389 aa11.41□□□□□ -0.58
CTNNA1-234ENST00000522227 FSCBQ5H9T9 825 aa11.41□□□□□ -0.58
CTNNA1-234ENST00000522227 AGBL4Q5VU57 503 aa11.41□□□□□ -0.58
CTNNA1-234ENST00000522227 ARL6IP4Q66PJ3 421 aaKnown RBP11.41□□□□□ -0.58
CTNNA1-234ENST00000522227 GCNT7Q6ZNI0 430 aa11.41□□□□□ -0.58
CTNNA1-234ENST00000522227 CRYBG2Q8N1P7 616 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms