RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 PBXIP1Q96AQ6 731 aa19.91■□□□□ 0.78
PCOLCE-208ENST00000487172 ALG14Q96F25 216 aa19.91■□□□□ 0.78
PCOLCE-208ENST00000487172 ZNF670Q9BS34 389 aa19.91■□□□□ 0.78
PCOLCE-208ENST00000487172 LMAN1LQ9HAT1 526 aa19.91■□□□□ 0.78
PCOLCE-208ENST00000487172 AMFRQ9UKV5 643 aa19.91■□□□□ 0.78
PCOLCE-208ENST00000487172 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.91■□□□□ 0.78
PCOLCE-208ENST00000487172 PCDHA3Q9Y5H8 950 aa19.91■□□□□ 0.78
PCOLCE-208ENST00000487172 VCANP13611 3396 aa19.9■□□□□ 0.78
PCOLCE-208ENST00000487172 CCDC66A2RUB6 948 aa19.9■□□□□ 0.78
PCOLCE-208ENST00000487172 DAPK3O43293 454 aa19.9■□□□□ 0.78
PCOLCE-208ENST00000487172 GPR37L1O60883 481 aa19.9■□□□□ 0.78
PCOLCE-208ENST00000487172 ERCC2P18074 760 aa19.9■□□□□ 0.78
PCOLCE-208ENST00000487172 AOC1P19801 751 aa19.9■□□□□ 0.78
PCOLCE-208ENST00000487172 MAGEA9P43362 315 aa19.9■□□□□ 0.78
PCOLCE-208ENST00000487172 RPS9P46781 194 aaKnown RBP19.9■□□□□ 0.78
PCOLCE-208ENST00000487172 E2F5Q15329 346 aa19.9■□□□□ 0.78
PCOLCE-208ENST00000487172 TMEM215Q68D42 235 aa19.9■□□□□ 0.78
PCOLCE-208ENST00000487172 PEX26Q7Z412 305 aa19.9■□□□□ 0.78
PCOLCE-208ENST00000487172 ADIPOR2Q86V24 386 aa19.9■□□□□ 0.78
PCOLCE-208ENST00000487172 KATNAL2Q8IYT4 538 aa19.9■□□□□ 0.78
PCOLCE-208ENST00000487172 OR52K2Q8NGK3 314 aa19.9■□□□□ 0.78
PCOLCE-208ENST00000487172 RAPGEF5Q92565 580 aa19.9■□□□□ 0.78
PCOLCE-208ENST00000487172 TTC17Q96AE7 1141 aa19.9■□□□□ 0.78
PCOLCE-208ENST00000487172 FAF2Q96CS3 445 aa19.9■□□□□ 0.78
PCOLCE-208ENST00000487172 CSPG4P5Q96PW8 444 aa19.9■□□□□ 0.78
PCOLCE-208ENST00000487172 FEM1AQ9BSK4 669 aa19.9■□□□□ 0.78
PCOLCE-208ENST00000487172 NDFIP2Q9NV92 336 aa19.9■□□□□ 0.78
PCOLCE-208ENST00000487172 ELOVL2Q9NXB9 296 aa19.9■□□□□ 0.78
PCOLCE-208ENST00000487172 INTS6Q9UL03 887 aaKnown RBP19.9■□□□□ 0.78
PCOLCE-208ENST00000487172 OR51B4Q9Y5P0 310 aa19.9■□□□□ 0.78
PCOLCE-208ENST00000487172 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.9■□□□□ 0.78
PCOLCE-208ENST00000487172 MIF4GDA9UHW6 222 aaKnown RBP19.89■□□□□ 0.77
PCOLCE-208ENST00000487172 RHOCP08134 193 aa19.89■□□□□ 0.77
PCOLCE-208ENST00000487172 CD48P09326 243 aa19.89■□□□□ 0.77
PCOLCE-208ENST00000487172 CSKP41240 450 aa19.89■□□□□ 0.77
PCOLCE-208ENST00000487172 KIR2DL1P43626 348 aaPredicted RBP19.89■□□□□ 0.77
PCOLCE-208ENST00000487172 YBEYP58557 167 aaPredicted RBP19.89■□□□□ 0.77
PCOLCE-208ENST00000487172 MRPS21P82921 87 aaKnown RBP19.89■□□□□ 0.77
PCOLCE-208ENST00000487172 PLEKHG6Q3KR16 790 aa19.89■□□□□ 0.77
PCOLCE-208ENST00000487172 ZFYVE27Q5T4F4 411 aa19.89■□□□□ 0.77
PCOLCE-208ENST00000487172 MBLAC2Q68D91 279 aa19.89■□□□□ 0.77
PCOLCE-208ENST00000487172 UMODL1-AS1Q8N2C9 162 aa19.89■□□□□ 0.77
PCOLCE-208ENST00000487172 LZTR1Q8N653 840 aa19.89■□□□□ 0.77
PCOLCE-208ENST00000487172 TRIM58Q8NG06 486 aa19.89■□□□□ 0.77
PCOLCE-208ENST00000487172 UCMAQ8WVF2 138 aa19.89■□□□□ 0.77
PCOLCE-208ENST00000487172 DNAI1Q9UI46 699 aa19.89■□□□□ 0.77
PCOLCE-208ENST00000487172 PYCARDQ9ULZ3 195 aa19.89■□□□□ 0.77
PCOLCE-208ENST00000487172 CHD5Q8TDI0 1954 aa19.88■□□□□ 0.77
PCOLCE-208ENST00000487172 C3orf70A6NLC5 250 aaPredicted RBP19.88■□□□□ 0.77
PCOLCE-208ENST00000487172 DCLK1O15075 740 aa19.88■□□□□ 0.77
PCOLCE-208ENST00000487172 ZRANB2O95218 330 aaKnown RBP eCLIP19.88■□□□□ 0.77
PCOLCE-208ENST00000487172 CHRM1P11229 460 aaPredicted RBP19.88■□□□□ 0.77
PCOLCE-208ENST00000487172 TNNT1P13805 278 aa19.88■□□□□ 0.77
PCOLCE-208ENST00000487172 POLR2EP19388 210 aaKnown RBP19.88■□□□□ 0.77
PCOLCE-208ENST00000487172 AMPD1P23109 780 aa19.88■□□□□ 0.77
PCOLCE-208ENST00000487172 MZF1P28698 734 aaPredicted RBP19.88■□□□□ 0.77
PCOLCE-208ENST00000487172 PEX5P50542 639 aa19.88■□□□□ 0.77
PCOLCE-208ENST00000487172 GNA12Q03113 381 aa19.88■□□□□ 0.77
PCOLCE-208ENST00000487172 SULT2A1Q06520 285 aa19.88■□□□□ 0.77
PCOLCE-208ENST00000487172 FUT11Q495W5 492 aa19.88■□□□□ 0.77
PCOLCE-208ENST00000487172 HSF5Q4G112 596 aaPredicted RBP19.88■□□□□ 0.77
PCOLCE-208ENST00000487172 ANKRD20A8PQ5CZ79 823 aa19.88■□□□□ 0.77
PCOLCE-208ENST00000487172 PITRM1Q5JRX3 1037 aa19.88■□□□□ 0.77
PCOLCE-208ENST00000487172 RNF219Q5W0B1 726 aaPredicted RBP19.88■□□□□ 0.77
PCOLCE-208ENST00000487172 SFTPA1Q8IWL2 248 aa19.88■□□□□ 0.77
PCOLCE-208ENST00000487172 RCOR2Q8IZ40 523 aa19.88■□□□□ 0.77
PCOLCE-208ENST00000487172 APCDD1Q8J025 514 aa19.88■□□□□ 0.77
PCOLCE-208ENST00000487172 FBXL6Q8N531 539 aa19.88■□□□□ 0.77
PCOLCE-208ENST00000487172 EXD1Q8NHP7 514 aa19.88■□□□□ 0.77
PCOLCE-208ENST00000487172 ALS2CR12Q96Q35 445 aa19.88■□□□□ 0.77
PCOLCE-208ENST00000487172 IER2Q9BTL4 223 aa19.88■□□□□ 0.77
PCOLCE-208ENST00000487172 CALN1Q9BXU9 219 aa19.88■□□□□ 0.77
PCOLCE-208ENST00000487172 MAGEH1Q9H213 219 aa19.88■□□□□ 0.77
PCOLCE-208ENST00000487172 PRDM16Q9HAZ2 1276 aa19.88■□□□□ 0.77
PCOLCE-208ENST00000487172 C11orf16Q9NQ32 467 aa19.88■□□□□ 0.77
PCOLCE-208ENST00000487172 KCND1Q9NSA2 647 aa19.88■□□□□ 0.77
PCOLCE-208ENST00000487172 RBM12Q9NTZ6 932 aaKnown RBP19.88■□□□□ 0.77
PCOLCE-208ENST00000487172 DLGAP2Q9P1A6 1054 aa19.88■□□□□ 0.77
PCOLCE-208ENST00000487172 BDP1A6H8Y1 2624 aa19.87■□□□□ 0.77
PCOLCE-208ENST00000487172 CXorf51AA0A1B0GTR3 108 aa19.87■□□□□ 0.77
PCOLCE-208ENST00000487172 LRRD1A4D1F6 860 aa19.87■□□□□ 0.77
PCOLCE-208ENST00000487172 GOLGA6L9A6NEM1 432 aa19.87■□□□□ 0.77
PCOLCE-208ENST00000487172 CHURC1-FNTBB4DL54 471 aa19.87■□□□□ 0.77
PCOLCE-208ENST00000487172 NPC1O15118 1278 aa19.87■□□□□ 0.77
PCOLCE-208ENST00000487172 RAMP2O60895 175 aa19.87■□□□□ 0.77
PCOLCE-208ENST00000487172 RNF40O75150 1001 aa19.87■□□□□ 0.77
PCOLCE-208ENST00000487172 KRT1P04264 644 aa19.87■□□□□ 0.77
PCOLCE-208ENST00000487172 ASLP04424 464 aa19.87■□□□□ 0.77
PCOLCE-208ENST00000487172 ATP5BP06576 529 aaKnown RBP19.87■□□□□ 0.77
PCOLCE-208ENST00000487172 HNRNPLP14866 589 aaKnown RBP eCLIP19.87■□□□□ 0.77
PCOLCE-208ENST00000487172 ETFBP38117 255 aa19.87■□□□□ 0.77
PCOLCE-208ENST00000487172 NDST2P52849 883 aa19.87■□□□□ 0.77
PCOLCE-208ENST00000487172 MMRN1Q13201 1228 aa19.87■□□□□ 0.77
PCOLCE-208ENST00000487172 TAZQ16635 292 aa19.87■□□□□ 0.77
PCOLCE-208ENST00000487172 ODF2Q5BJF6 829 aa19.87■□□□□ 0.77
PCOLCE-208ENST00000487172 USP33Q8TEY7 942 aa19.87■□□□□ 0.77
PCOLCE-208ENST00000487172 KRT35Q92764 455 aa19.87■□□□□ 0.77
PCOLCE-208ENST00000487172 ACDQ96AP0 544 aa19.87■□□□□ 0.77
PCOLCE-208ENST00000487172 HES6Q96HZ4 224 aa19.87■□□□□ 0.77
PCOLCE-208ENST00000487172 RNF157Q96PX1 679 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms