RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 TMEM174Q8WUU8 243 aa8.12□□□□□ -1.11
TPM3-215ENST00000469717 RPL10LQ96L21 214 aaKnown RBP8.12□□□□□ -1.11
TPM3-215ENST00000469717 ELP3Q9H9T3 547 aa8.12□□□□□ -1.11
TPM3-215ENST00000469717 MYOZ2Q9NPC6 264 aa8.12□□□□□ -1.11
TPM3-215ENST00000469717 VPS51Q9UID3 782 aa8.12□□□□□ -1.11
TPM3-215ENST00000469717 MYRFQ9Y2G1 1151 aa8.12□□□□□ -1.11
TPM3-215ENST00000469717 SAC3D1A6NKF1 404 aa8.12□□□□□ -1.11
TPM3-215ENST00000469717 SOCS2O14508 198 aa8.12□□□□□ -1.11
TPM3-215ENST00000469717 CHADO15335 359 aa8.12□□□□□ -1.11
TPM3-215ENST00000469717 TPST1O60507 370 aa8.12□□□□□ -1.11
TPM3-215ENST00000469717 TIPRLO75663 272 aa8.12□□□□□ -1.11
TPM3-215ENST00000469717 KCNH1O95259 989 aa8.12□□□□□ -1.11
TPM3-215ENST00000469717 ZBED1O96006 694 aa8.12□□□□□ -1.11
TPM3-215ENST00000469717 ZFXP17010 805 aaPredicted RBP8.12□□□□□ -1.11
TPM3-215ENST00000469717 NR4A1P22736 598 aa8.12□□□□□ -1.11
TPM3-215ENST00000469717 SOX11P35716 441 aa8.12□□□□□ -1.11
TPM3-215ENST00000469717 TMED10P49755 219 aaKnown RBP8.12□□□□□ -1.11
TPM3-215ENST00000469717 BMXP51813 675 aa8.12□□□□□ -1.11
TPM3-215ENST00000469717 HMGCS2P54868 508 aa8.12□□□□□ -1.11
TPM3-215ENST00000469717 MLLT10P55197 1068 aa8.12□□□□□ -1.11
TPM3-215ENST00000469717 C21orf59P57076 290 aa8.12□□□□□ -1.11
TPM3-215ENST00000469717 PMS2P3Q13401 168 aa8.12□□□□□ -1.11
TPM3-215ENST00000469717 TREML2Q5T2D2 321 aa8.12□□□□□ -1.11
TPM3-215ENST00000469717 STYK1Q6J9G0 422 aa8.12□□□□□ -1.11
TPM3-215ENST00000469717 TMEM110Q86TL2 294 aa8.12□□□□□ -1.11
TPM3-215ENST00000469717 OFCC1Q8IZS5 231 aa8.12□□□□□ -1.11
TPM3-215ENST00000469717 TBC1D15Q8TC07 691 aa8.12□□□□□ -1.11
TPM3-215ENST00000469717 ZNF668Q96K58 619 aaPredicted RBP8.12□□□□□ -1.11
TPM3-215ENST00000469717 APBA2Q99767 749 aa8.12□□□□□ -1.11
TPM3-215ENST00000469717 SLC39A3Q9BRY0 314 aa8.12□□□□□ -1.11
TPM3-215ENST00000469717 INO80BQ9C086 356 aaPredicted RBP8.12□□□□□ -1.11
TPM3-215ENST00000469717 KIAA1522Q9P206 1035 aaPredicted RBP8.12□□□□□ -1.11
TPM3-215ENST00000469717 NXF1Q9UBU9 619 aaKnown RBP8.12□□□□□ -1.11
TPM3-215ENST00000469717 HMGXB4Q9UGU5 601 aa8.12□□□□□ -1.11
TPM3-215ENST00000469717 ZNHIT2Q9UHR6 403 aa8.12□□□□□ -1.11
TPM3-215ENST00000469717 FIS1Q9Y3D6 152 aa8.12□□□□□ -1.11
TPM3-215ENST00000469717 H3BMQ9 156 aa8.12□□□□□ -1.11
TPM3-215ENST00000469717 ACOT8O14734 319 aa8.12□□□□□ -1.11
TPM3-215ENST00000469717 GIPC1O14908 333 aa8.12□□□□□ -1.11
TPM3-215ENST00000469717 KRT7P08729 469 aa8.12□□□□□ -1.11
TPM3-215ENST00000469717 MAP7D1Q3KQU3 841 aa8.12□□□□□ -1.11
TPM3-215ENST00000469717 CCDC92Q53HC0 331 aaPredicted RBP8.12□□□□□ -1.11
TPM3-215ENST00000469717 EGFLAMQ63HQ2 1017 aa8.12□□□□□ -1.11
TPM3-215ENST00000469717 HMBOX1Q6NT76 420 aa8.12□□□□□ -1.11
TPM3-215ENST00000469717 CYP4V2Q6ZWL3 525 aaPredicted RBP8.12□□□□□ -1.11
TPM3-215ENST00000469717 NANOGNBQ7Z5D8 188 aa8.12□□□□□ -1.11
TPM3-215ENST00000469717 GPR141Q7Z602 305 aa8.12□□□□□ -1.11
TPM3-215ENST00000469717 ZBTB33Q86T24 672 aa8.12□□□□□ -1.11
TPM3-215ENST00000469717 USP37Q86T82 979 aa8.12□□□□□ -1.11
TPM3-215ENST00000469717 SETD3Q86TU7 594 aaPredicted RBP8.12□□□□□ -1.11
TPM3-215ENST00000469717 CDR2LQ86X02 465 aaPredicted RBP8.12□□□□□ -1.11
TPM3-215ENST00000469717 TDRD5Q8NAT2 981 aaKnown RBP8.12□□□□□ -1.11
TPM3-215ENST00000469717 RSPH1Q8WYR4 309 aa8.12□□□□□ -1.11
TPM3-215ENST00000469717 PPP1R14BQ96C90 147 aa8.12□□□□□ -1.11
TPM3-215ENST00000469717 COG8Q96MW5 612 aa8.12□□□□□ -1.11
TPM3-215ENST00000469717 BEGAINQ9BUH8 593 aa8.12□□□□□ -1.11
TPM3-215ENST00000469717 MUC3BQ9H195 1237 aa8.12□□□□□ -1.11
TPM3-215ENST00000469717 TBC1D23Q9NUY8 699 aa8.12□□□□□ -1.11
TPM3-215ENST00000469717 THEGQ9P2T0 379 aa8.12□□□□□ -1.11
TPM3-215ENST00000469717 FBXO40Q9UH90 709 aa8.12□□□□□ -1.11
TPM3-215ENST00000469717 CCPG1Q9ULG6 757 aa8.12□□□□□ -1.11
TPM3-215ENST00000469717 CCDC78A2IDD5 438 aa8.11□□□□□ -1.11
TPM3-215ENST00000469717 EXTL3O43909 919 aa8.11□□□□□ -1.11
TPM3-215ENST00000469717 SPAG6O75602 509 aa8.11□□□□□ -1.11
TPM3-215ENST00000469717 VAPBO95292 243 aa8.11□□□□□ -1.11
TPM3-215ENST00000469717 TYK2P29597 1187 aa8.11□□□□□ -1.11
TPM3-215ENST00000469717 GRIA3P42263 894 aa8.11□□□□□ -1.11
TPM3-215ENST00000469717 TRPC1P48995 793 aa8.11□□□□□ -1.11
TPM3-215ENST00000469717 CLCN2P51788 898 aa8.11□□□□□ -1.11
TPM3-215ENST00000469717 ZNF132P52740 706 aa8.11□□□□□ -1.11
TPM3-215ENST00000469717 HADHQ16836 314 aaKnown RBP8.11□□□□□ -1.11
TPM3-215ENST00000469717 PDCD4Q53EL6 469 aaKnown RBP8.11□□□□□ -1.11
TPM3-215ENST00000469717 DHRS4L2Q6PKH6 230 aa8.11□□□□□ -1.11
TPM3-215ENST00000469717 GK5Q6ZS86 529 aa8.11□□□□□ -1.11
TPM3-215ENST00000469717 SLC15A4Q8N697 577 aa8.11□□□□□ -1.11
TPM3-215ENST00000469717 PLD5Q8N7P1 536 aa8.11□□□□□ -1.11
TPM3-215ENST00000469717 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.11□□□□□ -1.11
TPM3-215ENST00000469717 SLCO4A1Q96BD0 722 aa8.11□□□□□ -1.11
TPM3-215ENST00000469717 BIRC8Q96P09 236 aa8.11□□□□□ -1.11
TPM3-215ENST00000469717 TAAR1Q96RJ0 339 aa8.11□□□□□ -1.11
TPM3-215ENST00000469717 HNRNPABQ99729 332 aaKnown RBP8.11□□□□□ -1.11
TPM3-215ENST00000469717 EBNA1BP2Q99848 306 aaKnown RBP8.11□□□□□ -1.11
TPM3-215ENST00000469717 FERMT1Q9BQL6 677 aa8.11□□□□□ -1.11
TPM3-215ENST00000469717 CDH19Q9H159 772 aa8.11□□□□□ -1.11
TPM3-215ENST00000469717 SDCBP2Q9H190 292 aa8.11□□□□□ -1.11
TPM3-215ENST00000469717 DUS2Q9NX74 493 aaKnown RBP8.11□□□□□ -1.11
TPM3-215ENST00000469717 MKS1Q9NXB0 559 aa8.11□□□□□ -1.11
TPM3-215ENST00000469717 MTMR10Q9NXD2 777 aa8.11□□□□□ -1.11
TPM3-215ENST00000469717 GABBR1Q9UBS5 961 aa8.11□□□□□ -1.11
TPM3-215ENST00000469717 HACL1Q9UJ83 578 aa8.11□□□□□ -1.11
TPM3-215ENST00000469717 COL14A1Q05707 1796 aaKnown RBP8.11□□□□□ -1.11
TPM3-215ENST00000469717 PTPRFP10586 1907 aa8.11□□□□□ -1.11
TPM3-215ENST00000469717 COL5A3P25940 1745 aaPredicted RBP8.11□□□□□ -1.11
TPM3-215ENST00000469717 TRIP11Q15643 1979 aa8.11□□□□□ -1.11
TPM3-215ENST00000469717 A6NL46 340 aa8.11□□□□□ -1.11
TPM3-215ENST00000469717 CBFA2T3O75081 653 aa8.11□□□□□ -1.11
TPM3-215ENST00000469717 TRUB2O95900 331 aaKnown RBP8.11□□□□□ -1.11
TPM3-215ENST00000469717 CPA3P15088 417 aa8.11□□□□□ -1.11
TPM3-215ENST00000469717 SAT1P21673 171 aa8.11□□□□□ -1.11
TPM3-215ENST00000469717 ME2P23368 584 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms