RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 EPN2O95208 641 aa13.27□□□□□ -0.29
COL5A1-206ENST00000465877 RHOCP08134 193 aa13.27□□□□□ -0.29
COL5A1-206ENST00000465877 TPM1P09493 284 aa13.27□□□□□ -0.29
COL5A1-206ENST00000465877 FAM228BP0C875 321 aa13.27□□□□□ -0.29
COL5A1-206ENST00000465877 HNRNPH3P31942 346 aaKnown RBP13.27□□□□□ -0.29
COL5A1-206ENST00000465877 ADRA1BP35368 520 aa13.27□□□□□ -0.29
COL5A1-206ENST00000465877 CTSOP43234 321 aaPredicted RBP13.27□□□□□ -0.29
COL5A1-206ENST00000465877 STK19P49842 368 aaPredicted RBP13.27□□□□□ -0.29
COL5A1-206ENST00000465877 OXCT1P55809 520 aa13.27□□□□□ -0.29
COL5A1-206ENST00000465877 ST8SIA6P61647 398 aa13.27□□□□□ -0.29
COL5A1-206ENST00000465877 NRG1Q02297 640 aaPredicted RBP13.27□□□□□ -0.29
COL5A1-206ENST00000465877 ZNF177Q13360 481 aaPredicted RBP13.27□□□□□ -0.29
COL5A1-206ENST00000465877 CAMK2GQ13555 558 aaPredicted RBP13.27□□□□□ -0.29
COL5A1-206ENST00000465877 ARID5BQ14865 1188 aa13.27□□□□□ -0.29
COL5A1-206ENST00000465877 MAP7D1Q3KQU3 841 aa13.27□□□□□ -0.29
COL5A1-206ENST00000465877 PLK5Q496M5 336 aa13.27□□□□□ -0.29
COL5A1-206ENST00000465877 ARTNQ5T4W7 220 aa13.27□□□□□ -0.29
COL5A1-206ENST00000465877 RNF219Q5W0B1 726 aaPredicted RBP13.27□□□□□ -0.29
COL5A1-206ENST00000465877 DCLK2Q8N568 766 aa13.27□□□□□ -0.29
COL5A1-206ENST00000465877 RLN3Q8WXF3 142 aa13.27□□□□□ -0.29
COL5A1-206ENST00000465877 ZC3H10Q96K80 434 aaKnown RBP13.27□□□□□ -0.29
COL5A1-206ENST00000465877 TRIM7Q9C029 511 aa13.27□□□□□ -0.29
COL5A1-206ENST00000465877 ZYG11BQ9C0D3 744 aa13.27□□□□□ -0.29
COL5A1-206ENST00000465877 DUSP15Q9H1R2 295 aaPredicted RBP13.27□□□□□ -0.29
COL5A1-206ENST00000465877 PRDM16Q9HAZ2 1276 aa13.27□□□□□ -0.29
COL5A1-206ENST00000465877 ABHD10Q9NUJ1 306 aa13.27□□□□□ -0.29
COL5A1-206ENST00000465877 MPP6Q9NZW5 540 aa13.27□□□□□ -0.29
COL5A1-206ENST00000465877 VPS28Q9UK41 221 aa13.27□□□□□ -0.29
COL5A1-206ENST00000465877 ERVW-1Q9UQF0 538 aa13.27□□□□□ -0.29
COL5A1-206ENST00000465877 TBC1D30Q9Y2I9 924 aa13.27□□□□□ -0.29
COL5A1-206ENST00000465877 DRGXA6NNA5 263 aa13.26□□□□□ -0.29
COL5A1-206ENST00000465877 FAM72CH0Y354 149 aa13.26□□□□□ -0.29
COL5A1-206ENST00000465877 AP5Z1O43299 807 aa13.26□□□□□ -0.29
COL5A1-206ENST00000465877 PLXNA2O75051 1894 aa13.26□□□□□ -0.29
COL5A1-206ENST00000465877 RETP07949 1114 aa13.26□□□□□ -0.29
COL5A1-206ENST00000465877 SRPRAP08240 638 aaKnown RBP13.26□□□□□ -0.29
COL5A1-206ENST00000465877 PSMA2P25787 234 aa13.26□□□□□ -0.29
COL5A1-206ENST00000465877 AIF1P55008 147 aa13.26□□□□□ -0.29
COL5A1-206ENST00000465877 ECT2LQ008S8 904 aa13.26□□□□□ -0.29
COL5A1-206ENST00000465877 EFHC2Q5JST6 749 aa13.26□□□□□ -0.29
COL5A1-206ENST00000465877 FAM72AQ5TYM5 149 aa13.26□□□□□ -0.29
COL5A1-206ENST00000465877 FAM72DQ6L9T8 149 aa13.26□□□□□ -0.29
COL5A1-206ENST00000465877 FAM72BQ86X60 149 aa13.26□□□□□ -0.29
COL5A1-206ENST00000465877 FRMD1Q8N878 549 aa13.26□□□□□ -0.29
COL5A1-206ENST00000465877 KDM1BQ8NB78 822 aa13.26□□□□□ -0.29
COL5A1-206ENST00000465877 OR2T3Q8NH03 318 aa13.26□□□□□ -0.29
COL5A1-206ENST00000465877 FNIP1Q8TF40 1166 aa13.26□□□□□ -0.29
COL5A1-206ENST00000465877 ALG14Q96F25 216 aa13.26□□□□□ -0.29
COL5A1-206ENST00000465877 MUC3BQ9H195 1237 aa13.26□□□□□ -0.29
COL5A1-206ENST00000465877 FBRSQ9HAH7 460 aa13.26□□□□□ -0.29
COL5A1-206ENST00000465877 MYO1AQ9UBC5 1043 aa13.26□□□□□ -0.29
COL5A1-206ENST00000465877 PPARGC1AQ9UBK2 798 aaKnown RBP13.26□□□□□ -0.29
COL5A1-206ENST00000465877 ZNF212Q9UDV6 495 aa13.26□□□□□ -0.29
COL5A1-206ENST00000465877 OR12D3Q9UGF7 316 aa13.26□□□□□ -0.29
COL5A1-206ENST00000465877 MBD1Q9UIS9 605 aaPredicted RBP13.26□□□□□ -0.29
COL5A1-206ENST00000465877 NENFQ9UMX5 172 aa13.26□□□□□ -0.29
COL5A1-206ENST00000465877 CYP8B1Q9UNU6 501 aa13.26□□□□□ -0.29
COL5A1-206ENST00000465877 SDK1Q7Z5N4 2213 aa13.25□□□□□ -0.29
COL5A1-206ENST00000465877 IGHV1OR15-9A0A0B4J2B8 117 aa13.25□□□□□ -0.29
COL5A1-206ENST00000465877 TMEM191CA6NGB0 347 aa13.25□□□□□ -0.29
COL5A1-206ENST00000465877 ZNF217O75362 1048 aa13.25□□□□□ -0.29
COL5A1-206ENST00000465877 LRIG2O94898 1065 aa13.25□□□□□ -0.29
COL5A1-206ENST00000465877 EIF4A3P38919 411 aaKnown RBP13.25□□□□□ -0.29
COL5A1-206ENST00000465877 PLK1P53350 603 aa13.25□□□□□ -0.29
COL5A1-206ENST00000465877 SULT2A1Q06520 285 aa13.25□□□□□ -0.29
COL5A1-206ENST00000465877 BYSLQ13895 437 aaKnown RBP13.25□□□□□ -0.29
COL5A1-206ENST00000465877 HNRNPA1L2Q32P51 320 aaKnown RBP13.25□□□□□ -0.29
COL5A1-206ENST00000465877 C6orf118Q5T5N4 469 aa13.25□□□□□ -0.29
COL5A1-206ENST00000465877 SCYL2Q6P3W7 929 aa13.25□□□□□ -0.29
COL5A1-206ENST00000465877 ALKBH5Q6P6C2 394 aaKnown RBP13.25□□□□□ -0.29
COL5A1-206ENST00000465877 SLFN11Q7Z7L1 901 aa13.25□□□□□ -0.29
COL5A1-206ENST00000465877 SETD3Q86TU7 594 aaPredicted RBP13.25□□□□□ -0.29
COL5A1-206ENST00000465877 TMPRSS6Q8IU80 811 aa13.25□□□□□ -0.29
COL5A1-206ENST00000465877 DCAF4L2Q8NA75 395 aa13.25□□□□□ -0.29
COL5A1-206ENST00000465877 PRCCQ92733 491 aaPredicted RBP13.25□□□□□ -0.29
COL5A1-206ENST00000465877 TBC1D31Q96DN5 1066 aa13.25□□□□□ -0.29
COL5A1-206ENST00000465877 SIPA1Q96FS4 1042 aa13.25□□□□□ -0.29
COL5A1-206ENST00000465877 LOXL4Q96JB6 756 aa13.25□□□□□ -0.29
COL5A1-206ENST00000465877 RPL10LQ96L21 214 aaKnown RBP13.25□□□□□ -0.29
COL5A1-206ENST00000465877 PPP1R9BQ96SB3 815 aa13.25□□□□□ -0.29
COL5A1-206ENST00000465877 FEM1AQ9BSK4 669 aa13.25□□□□□ -0.29
COL5A1-206ENST00000465877 TRIM5Q9C035 493 aa13.25□□□□□ -0.29
COL5A1-206ENST00000465877 THAP2Q9H0W7 228 aa13.25□□□□□ -0.29
COL5A1-206ENST00000465877 RBSNQ9H1K0 784 aa13.25□□□□□ -0.29
COL5A1-206ENST00000465877 OSBPL2Q9H1P3 480 aa13.25□□□□□ -0.29
COL5A1-206ENST00000465877 MTG2Q9H4K7 406 aa13.25□□□□□ -0.29
COL5A1-206ENST00000465877 MRPL47Q9HD33 250 aaKnown RBP13.25□□□□□ -0.29
COL5A1-206ENST00000465877 USP36Q9P275 1121 aaKnown RBP13.25□□□□□ -0.29
COL5A1-206ENST00000465877 SLC25A13Q9UJS0 675 aa13.25□□□□□ -0.29
COL5A1-206ENST00000465877 OR51B4Q9Y5P0 310 aa13.25□□□□□ -0.29
COL5A1-206ENST00000465877 NUMA1Q14980 2115 aa13.25□□□□□ -0.29
COL5A1-206ENST00000465877 SPTBN4Q9H254 2564 aa13.25□□□□□ -0.29
COL5A1-206ENST00000465877 PCDH15Q96QU1 1955 aa13.24□□□□□ -0.29
COL5A1-206ENST00000465877 ANKRD36A6QL64 1941 aa13.24□□□□□ -0.29
COL5A1-206ENST00000465877 ADAMTS9Q9P2N4 1935 aa13.24□□□□□ -0.29
COL5A1-206ENST00000465877 EDDM13A0A1B0GTR0 161 aa13.24□□□□□ -0.29
COL5A1-206ENST00000465877 LRP3O75074 770 aa13.24□□□□□ -0.29
COL5A1-206ENST00000465877 SIN3BO75182 1162 aa13.24□□□□□ -0.29
COL5A1-206ENST00000465877 RHOBTB1O94844 696 aa13.24□□□□□ -0.29
COL5A1-206ENST00000465877 OR1E1P30953 314 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms