RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	PABPC1	P11940	636 aa	Known RBP	13.12	□□□□□ -0.31
FDPS-204	ENST00000461507	PDGFRA	P16234	1089 aa		13.12	□□□□□ -0.31
FDPS-204	ENST00000461507	TFE3	P19532	575 aa	Predicted RBP	13.12	□□□□□ -0.31
FDPS-204	ENST00000461507	OXTR	P30559	389 aa		13.12	□□□□□ -0.31
FDPS-204	ENST00000461507	SLC6A4	P31645	630 aa		13.12	□□□□□ -0.31
FDPS-204	ENST00000461507	RDX	P35241	583 aa	Known RBP	13.12	□□□□□ -0.31
FDPS-204	ENST00000461507	SCNN1A	P37088	669 aa		13.12	□□□□□ -0.31
FDPS-204	ENST00000461507	TPMT	P51580	245 aa		13.12	□□□□□ -0.31
FDPS-204	ENST00000461507	GFPT1	Q06210	699 aa	Predicted RBP	13.12	□□□□□ -0.31
FDPS-204	ENST00000461507	C1QBP	Q07021	282 aa	Known RBP	13.12	□□□□□ -0.31
FDPS-204	ENST00000461507	CDH18	Q13634	790 aa		13.12	□□□□□ -0.31
FDPS-204	ENST00000461507	PTPRN	Q16849	979 aa		13.12	□□□□□ -0.31
FDPS-204	ENST00000461507	WDR45B	Q5MNZ6	344 aa		13.12	□□□□□ -0.31
FDPS-204	ENST00000461507	PIK3R6	Q5UE93	754 aa		13.12	□□□□□ -0.31
FDPS-204	ENST00000461507	NADSYN1	Q6IA69	706 aa		13.12	□□□□□ -0.31
FDPS-204	ENST00000461507	PPP1R2P3	Q6NXS1	205 aa		13.12	□□□□□ -0.31
FDPS-204	ENST00000461507	SERPINA13P	Q6UXR4	307 aa		13.12	□□□□□ -0.31
FDPS-204	ENST00000461507	MON1B	Q7L1V2	547 aa		13.12	□□□□□ -0.31
FDPS-204	ENST00000461507	DNAAF5	Q86Y56	855 aa		13.12	□□□□□ -0.31
FDPS-204	ENST00000461507	PHF13	Q86YI8	300 aa	Predicted RBP	13.12	□□□□□ -0.31
FDPS-204	ENST00000461507	TMPRSS6	Q8IU80	811 aa		13.12	□□□□□ -0.31
FDPS-204	ENST00000461507	OR2T3	Q8NH03	318 aa		13.12	□□□□□ -0.31
FDPS-204	ENST00000461507	JOSD2	Q8TAC2	188 aa		13.12	□□□□□ -0.31
FDPS-204	ENST00000461507	RXFP2	Q8WXD0	754 aa		13.12	□□□□□ -0.31
FDPS-204	ENST00000461507	SORCS1	Q8WY21	1168 aa		13.12	□□□□□ -0.31
FDPS-204	ENST00000461507	ZNF653	Q96CK0	615 aa		13.12	□□□□□ -0.31
FDPS-204	ENST00000461507	SIPA1	Q96FS4	1042 aa		13.12	□□□□□ -0.31
FDPS-204	ENST00000461507	TOE1	Q96GM8	510 aa	Known RBP	13.12	□□□□□ -0.31
FDPS-204	ENST00000461507	PRICKLE1	Q96MT3	831 aa	Predicted RBP	13.12	□□□□□ -0.31
FDPS-204	ENST00000461507	RBSN	Q9H1K0	784 aa		13.12	□□□□□ -0.31
FDPS-204	ENST00000461507	PIGV	Q9NUD9	493 aa		13.12	□□□□□ -0.31
FDPS-204	ENST00000461507	DNAAF2	Q9NVR5	837 aa	Known RBP	13.12	□□□□□ -0.31
FDPS-204	ENST00000461507	ZNHIT6	Q9NWK9	470 aa	Known RBP	13.12	□□□□□ -0.31
FDPS-204	ENST00000461507	MYO1A	Q9UBC5	1043 aa		13.12	□□□□□ -0.31
FDPS-204	ENST00000461507	GGA2	Q9UJY4	613 aa		13.12	□□□□□ -0.31
FDPS-204	ENST00000461507	CAPN11	Q9UMQ6	739 aa		13.12	□□□□□ -0.31
FDPS-204	ENST00000461507	KCNU1	A8MYU2	1149 aa		13.11	□□□□□ -0.31
FDPS-204	ENST00000461507		H0Y626	953 aa		13.11	□□□□□ -0.31
FDPS-204	ENST00000461507	SYNCRIP	O60506	623 aa	Known RBP	13.11	□□□□□ -0.31
FDPS-204	ENST00000461507	NDUFS2	O75306	463 aa		13.11	□□□□□ -0.31
FDPS-204	ENST00000461507	F9	P00740	461 aa		13.11	□□□□□ -0.31
FDPS-204	ENST00000461507	IGLV3-25	P01717	112 aa		13.11	□□□□□ -0.31
FDPS-204	ENST00000461507	EPHX1	P07099	455 aa		13.11	□□□□□ -0.31
FDPS-204	ENST00000461507	GPD1	P21695	349 aa		13.11	□□□□□ -0.31
FDPS-204	ENST00000461507	RRM1	P23921	792 aa		13.11	□□□□□ -0.31
FDPS-204	ENST00000461507	MAPK8	P45983	427 aa		13.11	□□□□□ -0.31
FDPS-204	ENST00000461507	NUMB	P49757	651 aa		13.11	□□□□□ -0.31
FDPS-204	ENST00000461507	RPS24	P62847	133 aa	Known RBP	13.11	□□□□□ -0.31
FDPS-204	ENST00000461507	ST3GAL2	Q16842	350 aa		13.11	□□□□□ -0.31
FDPS-204	ENST00000461507	C15orf59	Q2T9L4	293 aa	Predicted RBP	13.11	□□□□□ -0.31
FDPS-204	ENST00000461507	UAP1L1	Q3KQV9	507 aa		13.11	□□□□□ -0.31
FDPS-204	ENST00000461507	SLC25A52	Q3SY17	297 aa		13.11	□□□□□ -0.31
FDPS-204	ENST00000461507	MS4A13	Q5J8X5	152 aa		13.11	□□□□□ -0.31
FDPS-204	ENST00000461507	RABGAP1L	Q5R372	815 aa		13.11	□□□□□ -0.31
FDPS-204	ENST00000461507	SYCP2L	Q5T4T6	812 aa		13.11	□□□□□ -0.31
FDPS-204	ENST00000461507	CHST9	Q7L1S5	443 aa		13.11	□□□□□ -0.31
FDPS-204	ENST00000461507	CIR1	Q86X95	450 aa	Predicted RBP	13.11	□□□□□ -0.31
FDPS-204	ENST00000461507	FAM131B	Q86XD5	332 aa		13.11	□□□□□ -0.31
FDPS-204	ENST00000461507	VSTM4	Q8IW00	320 aa		13.11	□□□□□ -0.31
FDPS-204	ENST00000461507	MCOLN2	Q8IZK6	566 aa		13.11	□□□□□ -0.31
FDPS-204	ENST00000461507	DEFB119	Q8N690	84 aa		13.11	□□□□□ -0.31
FDPS-204	ENST00000461507	C3orf20	Q8ND61	904 aa		13.11	□□□□□ -0.31
FDPS-204	ENST00000461507	DEFB124	Q8NES8	71 aa		13.11	□□□□□ -0.31
FDPS-204	ENST00000461507	WFDC5	Q8TCV5	224 aa		13.11	□□□□□ -0.31
FDPS-204	ENST00000461507	PRCC	Q92733	491 aa	Predicted RBP	13.11	□□□□□ -0.31
FDPS-204	ENST00000461507	RPRD1A	Q96P16	312 aa	Predicted RBP	13.11	□□□□□ -0.31
FDPS-204	ENST00000461507	NPY6R	Q99463	290 aa		13.11	□□□□□ -0.31
FDPS-204	ENST00000461507	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	13.11	□□□□□ -0.31
FDPS-204	ENST00000461507	TKTL2	Q9H0I9	626 aa		13.11	□□□□□ -0.31
FDPS-204	ENST00000461507	ABCB8	Q9NUT2	735 aa		13.11	□□□□□ -0.31
FDPS-204	ENST00000461507	BZW2	Q9Y6E2	419 aa	Known RBP	13.11	□□□□□ -0.31
FDPS-204	ENST00000461507	DDX3X	O00571	662 aa	Known RBP eCLIP	13.1	□□□□□ -0.31	9e-23	■□□□□ 11.3
FDPS-204	ENST00000461507	OPHN1	O60890	802 aa		13.1	□□□□□ -0.31
FDPS-204	ENST00000461507	PAGE1	O75459	146 aa		13.1	□□□□□ -0.31
FDPS-204	ENST00000461507	FTL	P02792	175 aa	Predicted RBP	13.1	□□□□□ -0.31
FDPS-204	ENST00000461507	SYP	P08247	313 aa		13.1	□□□□□ -0.31
FDPS-204	ENST00000461507	PLEK	P08567	350 aa	Predicted RBP	13.1	□□□□□ -0.31
FDPS-204	ENST00000461507	DLD	P09622	509 aa	Known RBP	13.1	□□□□□ -0.31
FDPS-204	ENST00000461507	HLA-E	P13747	358 aa		13.1	□□□□□ -0.31
FDPS-204	ENST00000461507	CD70	P32970	193 aa		13.1	□□□□□ -0.31
FDPS-204	ENST00000461507	PRKCI	P41743	596 aa		13.1	□□□□□ -0.31
FDPS-204	ENST00000461507	ZBTB16	Q05516	673 aa		13.1	□□□□□ -0.31
FDPS-204	ENST00000461507	PTP4A2	Q12974	167 aa		13.1	□□□□□ -0.31
FDPS-204	ENST00000461507	SLC14A1	Q13336	389 aa		13.1	□□□□□ -0.31
FDPS-204	ENST00000461507	EIF4EBP2	Q13542	120 aa	Predicted RBP	13.1	□□□□□ -0.31
FDPS-204	ENST00000461507	OTUD1	Q5VV17	481 aa	Predicted RBP	13.1	□□□□□ -0.31
FDPS-204	ENST00000461507	MBLAC2	Q68D91	279 aa		13.1	□□□□□ -0.31
FDPS-204	ENST00000461507	SCYL2	Q6P3W7	929 aa		13.1	□□□□□ -0.31
FDPS-204	ENST00000461507	MINDY1	Q8N5J2	469 aa		13.1	□□□□□ -0.31
FDPS-204	ENST00000461507	C1orf216	Q8TAB5	229 aa		13.1	□□□□□ -0.31
FDPS-204	ENST00000461507	FIBIN	Q8TAL6	211 aa		13.1	□□□□□ -0.31
FDPS-204	ENST00000461507	FAM172A	Q8WUF8	416 aa		13.1	□□□□□ -0.31
FDPS-204	ENST00000461507	TTC17	Q96AE7	1141 aa		13.1	□□□□□ -0.31
FDPS-204	ENST00000461507	MYO19	Q96H55	970 aa		13.1	□□□□□ -0.31
FDPS-204	ENST00000461507	ZDHHC5	Q9C0B5	715 aa		13.1	□□□□□ -0.31
FDPS-204	ENST00000461507	SLC32A1	Q9H598	525 aa		13.1	□□□□□ -0.31
FDPS-204	ENST00000461507	FSCN3	Q9NQT6	498 aa		13.1	□□□□□ -0.31
FDPS-204	ENST00000461507	CNOT8	Q9UFF9	292 aa	Known RBP	13.1	□□□□□ -0.31
FDPS-204	ENST00000461507	ADAMTS1	Q9UHI8	967 aa		13.1	□□□□□ -0.31
FDPS-204	ENST00000461507	TMEM59L	Q9UK28	342 aa		13.1	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms