RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 NUCKS1Q9H1E3 243 aaKnown RBP17.79■□□□□ 0.44
UBE2D4-209ENST00000454428 POLR1BQ9H9Y6 1135 aa17.79■□□□□ 0.44
UBE2D4-209ENST00000454428 LRRC4Q9HBW1 653 aa17.79■□□□□ 0.44
UBE2D4-209ENST00000454428 TMEM8AQ9HCN3 771 aa17.79■□□□□ 0.44
UBE2D4-209ENST00000454428 SARDHQ9UL12 918 aa17.79■□□□□ 0.44
UBE2D4-209ENST00000454428 PLRG1O43660 514 aaKnown RBP17.78■□□□□ 0.44
UBE2D4-209ENST00000454428 CSO75390 466 aaKnown RBP17.78■□□□□ 0.44
UBE2D4-209ENST00000454428 YEATS4O95619 227 aa17.78■□□□□ 0.44
UBE2D4-209ENST00000454428 IL1BP01584 269 aa17.78■□□□□ 0.44
UBE2D4-209ENST00000454428 CKMT1AP12532 417 aa17.78■□□□□ 0.44
UBE2D4-209ENST00000454428 SLC11A2P49281 568 aa17.78■□□□□ 0.44
UBE2D4-209ENST00000454428 SLC8A3P57103 927 aa17.78■□□□□ 0.44
UBE2D4-209ENST00000454428 DAB2P98082 770 aa17.78■□□□□ 0.44
UBE2D4-209ENST00000454428 ECT2LQ008S8 904 aa17.78■□□□□ 0.44
UBE2D4-209ENST00000454428 BST2Q10589 180 aaKnown RBP17.78■□□□□ 0.44
UBE2D4-209ENST00000454428 NUGGCQ68CJ6 796 aa17.78■□□□□ 0.44
UBE2D4-209ENST00000454428 INTS8Q75QN2 995 aaKnown RBP17.78■□□□□ 0.44
UBE2D4-209ENST00000454428 TMC6Q7Z403 805 aa17.78■□□□□ 0.44
UBE2D4-209ENST00000454428 PRPF39Q86UA1 669 aaKnown RBP17.78■□□□□ 0.44
UBE2D4-209ENST00000454428 UNC45BQ8IWX7 931 aa17.78■□□□□ 0.44
UBE2D4-209ENST00000454428 CFAP52Q8N1V2 620 aa17.78■□□□□ 0.44
UBE2D4-209ENST00000454428 UBA3Q8TBC4 463 aa17.78■□□□□ 0.44
UBE2D4-209ENST00000454428 KCTD13Q8WZ19 329 aa17.78■□□□□ 0.44
UBE2D4-209ENST00000454428 FAXDC2Q96IV6 333 aa17.78■□□□□ 0.44
UBE2D4-209ENST00000454428 FCRL2Q96LA5 508 aaPredicted RBP17.78■□□□□ 0.44
UBE2D4-209ENST00000454428 IPO9Q96P70 1041 aaKnown RBP17.78■□□□□ 0.44
UBE2D4-209ENST00000454428 DEPDC7Q96QD5 511 aa17.78■□□□□ 0.44
UBE2D4-209ENST00000454428 EXOC1Q9NV70 894 aa17.78■□□□□ 0.44
UBE2D4-209ENST00000454428 DMTF1Q9Y222 760 aa17.78■□□□□ 0.44
UBE2D4-209ENST00000454428 FLNCQ14315 2725 aa17.78■□□□□ 0.44
UBE2D4-209ENST00000454428 K7ENP7 123 aa17.77■□□□□ 0.44
UBE2D4-209ENST00000454428 ACTN4O43707 911 aaKnown RBP17.77■□□□□ 0.44
UBE2D4-209ENST00000454428 LZTS3O60299 673 aaPredicted RBP17.77■□□□□ 0.44
UBE2D4-209ENST00000454428 ENPEPQ07075 957 aa17.77■□□□□ 0.44
UBE2D4-209ENST00000454428 ELAVL3Q14576 367 aaKnown RBP17.77■□□□□ 0.44
UBE2D4-209ENST00000454428 NFIL3Q16649 462 aa17.77■□□□□ 0.44
UBE2D4-209ENST00000454428 MS4A13Q5J8X5 152 aa17.77■□□□□ 0.44
UBE2D4-209ENST00000454428 AGBL4Q5VU57 503 aa17.77■□□□□ 0.44
UBE2D4-209ENST00000454428 RESP18Q5W5W9 173 aa17.77■□□□□ 0.44
UBE2D4-209ENST00000454428 INO80CQ6PI98 192 aaPredicted RBP17.77■□□□□ 0.44
UBE2D4-209ENST00000454428 IGF2-ASQ6U949 168 aa17.77■□□□□ 0.44
UBE2D4-209ENST00000454428 TRIM69Q86WT6 500 aa17.77■□□□□ 0.44
UBE2D4-209ENST00000454428 LURAP1LQ8IV03 231 aa17.77■□□□□ 0.44
UBE2D4-209ENST00000454428 TMEM145Q8NBT3 493 aa17.77■□□□□ 0.44
UBE2D4-209ENST00000454428 FRS2Q8WU20 508 aa17.77■□□□□ 0.44
UBE2D4-209ENST00000454428 KDM4CQ9H3R0 1056 aa17.77■□□□□ 0.44
UBE2D4-209ENST00000454428 CNGB3Q9NQW8 809 aa17.77■□□□□ 0.44
UBE2D4-209ENST00000454428 SERTAD1Q9UHV2 236 aa17.77■□□□□ 0.44
UBE2D4-209ENST00000454428 KIF26BQ2KJY2 2108 aa17.77■□□□□ 0.43
UBE2D4-209ENST00000454428 FFAR2O15552 330 aa17.76■□□□□ 0.43
UBE2D4-209ENST00000454428 MAGEC1O60732 1142 aa17.76■□□□□ 0.43
UBE2D4-209ENST00000454428 LUC7L3O95232 432 aaKnown RBP17.76■□□□□ 0.43
UBE2D4-209ENST00000454428 LCP1P13796 627 aa17.76■□□□□ 0.43
UBE2D4-209ENST00000454428 NR2F2P24468 414 aa17.76■□□□□ 0.43
UBE2D4-209ENST00000454428 NUMBP49757 651 aa17.76■□□□□ 0.43
UBE2D4-209ENST00000454428 TBX4P57082 545 aa17.76■□□□□ 0.43
UBE2D4-209ENST00000454428 CDH18Q13634 790 aa17.76■□□□□ 0.43
UBE2D4-209ENST00000454428 STAT4Q14765 748 aa17.76■□□□□ 0.43
UBE2D4-209ENST00000454428 POM121L1PQ3SYA9 428 aa17.76■□□□□ 0.43
UBE2D4-209ENST00000454428 DCAF6Q58WW2 860 aa17.76■□□□□ 0.43
UBE2D4-209ENST00000454428 KRT39Q6A163 491 aa17.76■□□□□ 0.43
UBE2D4-209ENST00000454428 FAM186BQ8IYM0 893 aa17.76■□□□□ 0.43
UBE2D4-209ENST00000454428 SIX6OS1Q8N1H7 587 aa17.76■□□□□ 0.43
UBE2D4-209ENST00000454428 TTC39CQ8N584 583 aa17.76■□□□□ 0.43
UBE2D4-209ENST00000454428 CCDC150Q8NCX0 1101 aa17.76■□□□□ 0.43
UBE2D4-209ENST00000454428 CLEC4CQ8WTT0 213 aa17.76■□□□□ 0.43
UBE2D4-209ENST00000454428 EEF2KMTQ96G04 330 aa17.76■□□□□ 0.43
UBE2D4-209ENST00000454428 PAGE5Q96GU1 130 aa17.76■□□□□ 0.43
UBE2D4-209ENST00000454428 PRR11Q96HE9 360 aaPredicted RBP17.76■□□□□ 0.43
UBE2D4-209ENST00000454428 APOLD1Q96LR9 279 aa17.76■□□□□ 0.43
UBE2D4-209ENST00000454428 XPO7Q9UIA9 1087 aaKnown RBP17.76■□□□□ 0.43
UBE2D4-209ENST00000454428 PMS2P1A4D2B8 440 aa17.75■□□□□ 0.43
UBE2D4-209ENST00000454428 PRAMEF26H0Y7S4 382 aa17.75■□□□□ 0.43
UBE2D4-209ENST00000454428 O00370 1275 aa17.75■□□□□ 0.43
UBE2D4-209ENST00000454428 PIK3R2O00459 728 aa17.75■□□□□ 0.43
UBE2D4-209ENST00000454428 SLC7A4O43246 635 aa17.75■□□□□ 0.43
UBE2D4-209ENST00000454428 CALUO43852 315 aaPredicted RBP17.75■□□□□ 0.43
UBE2D4-209ENST00000454428 FYNP06241 537 aa17.75■□□□□ 0.43
UBE2D4-209ENST00000454428 GTF2H1P32780 548 aa17.75■□□□□ 0.43
UBE2D4-209ENST00000454428 NUDT1P36639 197 aa17.75■□□□□ 0.43
UBE2D4-209ENST00000454428 CSRP3P50461 194 aa17.75■□□□□ 0.43
UBE2D4-209ENST00000454428 TAS2R38P59533 333 aa17.75■□□□□ 0.43
UBE2D4-209ENST00000454428 KCNMA1Q12791 1236 aa17.75■□□□□ 0.43
UBE2D4-209ENST00000454428 CNTN1Q12860 1018 aa17.75■□□□□ 0.43
UBE2D4-209ENST00000454428 SGO2Q562F6 1265 aa17.75■□□□□ 0.43
UBE2D4-209ENST00000454428 KLHDC7BQ96G42 594 aa17.75■□□□□ 0.43
UBE2D4-209ENST00000454428 SLC39A13Q96H72 371 aa17.75■□□□□ 0.43
UBE2D4-209ENST00000454428 THSD1Q9NS62 852 aa17.75■□□□□ 0.43
UBE2D4-209ENST00000454428 KLHL11Q9NVR0 708 aa17.75■□□□□ 0.43
UBE2D4-209ENST00000454428 RAB20Q9NX57 234 aa17.75■□□□□ 0.43
UBE2D4-209ENST00000454428 PCDHA7Q9UN72 937 aa17.75■□□□□ 0.43
UBE2D4-209ENST00000454428 SATB2Q9UPW6 733 aa17.75■□□□□ 0.43
UBE2D4-209ENST00000454428 TLN1Q9Y490 2541 aaKnown RBP17.74■□□□□ 0.43
UBE2D4-209ENST00000454428 PIAS2O75928 621 aa17.74■□□□□ 0.43
UBE2D4-209ENST00000454428 GP1BAP07359 652 aa17.74■□□□□ 0.43
UBE2D4-209ENST00000454428 THEGLP0DJG4 465 aa17.74■□□□□ 0.43
UBE2D4-209ENST00000454428 ISXQ2M1V0 245 aa17.74■□□□□ 0.43
UBE2D4-209ENST00000454428 ERICH6BQ5W0A0 696 aa17.74■□□□□ 0.43
UBE2D4-209ENST00000454428 PMF1Q6P1K2 205 aa17.74■□□□□ 0.43
UBE2D4-209ENST00000454428 EXD3Q8N9H8 876 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms