RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 MFSD10Q14728 455 aa18.79■□□□□ 0.6
SHANK3-202ENST00000414786 AGGF1Q8N302 714 aaeCLIP18.79■□□□□ 0.6
SHANK3-202ENST00000414786 LRRC40Q9H9A6 602 aa18.79■□□□□ 0.6
SHANK3-202ENST00000414786 CD3EAPO15446 510 aaKnown RBP18.79■□□□□ 0.6
SHANK3-202ENST00000414786 ATP5BP06576 529 aaKnown RBP18.79■□□□□ 0.6
SHANK3-202ENST00000414786 PIRTP0C851 137 aa18.79■□□□□ 0.6
SHANK3-202ENST00000414786 MPP3Q13368 585 aa18.79■□□□□ 0.6
SHANK3-202ENST00000414786 ZBTB46Q86UZ6 589 aa18.79■□□□□ 0.6
SHANK3-202ENST00000414786 FAM151AQ8WW52 585 aa18.79■□□□□ 0.6
SHANK3-202ENST00000414786 PRMT6Q96LA8 375 aaPredicted RBP18.79■□□□□ 0.6
SHANK3-202ENST00000414786 INVSQ9Y283 1065 aa18.79■□□□□ 0.6
SHANK3-202ENST00000414786 PER1O15534 1290 aaPredicted RBP18.79■□□□□ 0.6
SHANK3-202ENST00000414786 OR5F1O95221 314 aa18.79■□□□□ 0.6
SHANK3-202ENST00000414786 ECDO95905 644 aaPredicted RBP18.79■□□□□ 0.6
SHANK3-202ENST00000414786 SERPINF2P08697 491 aa18.79■□□□□ 0.6
SHANK3-202ENST00000414786 LAMTOR4Q0VGL1 99 aa18.79■□□□□ 0.6
SHANK3-202ENST00000414786 IKBKEQ14164 716 aa18.79■□□□□ 0.6
SHANK3-202ENST00000414786 STK32CQ86UX6 486 aa18.79■□□□□ 0.6
SHANK3-202ENST00000414786 ANKFN1Q8N957 763 aa18.79■□□□□ 0.6
SHANK3-202ENST00000414786 CD248Q9HCU0 757 aa18.79■□□□□ 0.6
SHANK3-202ENST00000414786 ARIH1Q9Y4X5 557 aaPredicted RBP18.79■□□□□ 0.6
SHANK3-202ENST00000414786 USP6P35125 1406 aa18.79■□□□□ 0.6
SHANK3-202ENST00000414786 MGRN1O60291 552 aa18.79■□□□□ 0.6
SHANK3-202ENST00000414786 IDH2P48735 452 aaKnown RBP18.79■□□□□ 0.6
SHANK3-202ENST00000414786 ZCCHC23Q6ZST2 131 aa18.79■□□□□ 0.6
SHANK3-202ENST00000414786 ZNF655Q8N720 491 aaPredicted RBP18.79■□□□□ 0.6
SHANK3-202ENST00000414786 ADARB2Q9NS39 739 aaKnown RBP18.79■□□□□ 0.6
SHANK3-202ENST00000414786 KIAA0391O15091 583 aaKnown RBP18.79■□□□□ 0.6
SHANK3-202ENST00000414786 SSNA1O43805 119 aa18.79■□□□□ 0.6
SHANK3-202ENST00000414786 TPBGLP0DKB5 382 aa18.79■□□□□ 0.6
SHANK3-202ENST00000414786 TLX1P31314 330 aaPredicted RBP18.79■□□□□ 0.6
SHANK3-202ENST00000414786 ATP13A4Q4VNC1 1196 aa18.79■□□□□ 0.6
SHANK3-202ENST00000414786 NETO2Q8NC67 525 aa18.79■□□□□ 0.6
SHANK3-202ENST00000414786 ATL1Q8WXF7 558 aa18.79■□□□□ 0.6
SHANK3-202ENST00000414786 ZIM3Q96PE6 472 aa18.79■□□□□ 0.6
SHANK3-202ENST00000414786 MCCC2Q9HCC0 563 aa18.79■□□□□ 0.6
SHANK3-202ENST00000414786 ARHGAP28Q9P2N2 729 aa18.79■□□□□ 0.6
SHANK3-202ENST00000414786 SLC37A4O43826 429 aa18.78■□□□□ 0.6
SHANK3-202ENST00000414786 CCNA2P20248 432 aa18.78■□□□□ 0.6
SHANK3-202ENST00000414786 PSRC1Q6PGN9 363 aaPredicted RBP18.78■□□□□ 0.6
SHANK3-202ENST00000414786 ADAM2Q99965 735 aa18.78■□□□□ 0.6
SHANK3-202ENST00000414786 PAIP1Q9H074 479 aaKnown RBP18.78■□□□□ 0.6
SHANK3-202ENST00000414786 MATN4O95460 622 aa18.78■□□□□ 0.6
SHANK3-202ENST00000414786 IGFALSP35858 605 aa18.78■□□□□ 0.6
SHANK3-202ENST00000414786 ZNF605Q86T29 641 aa18.78■□□□□ 0.6
SHANK3-202ENST00000414786 METTL16Q86W50 562 aaKnown RBP18.78■□□□□ 0.6
SHANK3-202ENST00000414786 OR2L5Q8NG80 312 aa18.78■□□□□ 0.6
SHANK3-202ENST00000414786 WDR60Q8WVS4 1066 aa18.78■□□□□ 0.6
SHANK3-202ENST00000414786 ZCCHC2Q9C0B9 1178 aaKnown RBP18.78■□□□□ 0.6
SHANK3-202ENST00000414786 NCAPD2Q15021 1401 aa18.78■□□□□ 0.6
SHANK3-202ENST00000414786 BUD31P41223 144 aaPredicted RBP18.78■□□□□ 0.6
SHANK3-202ENST00000414786 QKIQ96PU8 341 aaKnown RBP eCLIP18.78■□□□□ 0.6
SHANK3-202ENST00000414786 EPB41L4BQ9H329 900 aa18.78■□□□□ 0.6
SHANK3-202ENST00000414786 MARCH7Q9H992 704 aa18.78■□□□□ 0.6
SHANK3-202ENST00000414786 DSEQ9UL01 958 aa18.78■□□□□ 0.6
SHANK3-202ENST00000414786 KCNK1O00180 336 aa18.78■□□□□ 0.6
SHANK3-202ENST00000414786 GJB6O95452 261 aa18.78■□□□□ 0.6
SHANK3-202ENST00000414786 USP41Q3LFD5 358 aa18.78■□□□□ 0.6
SHANK3-202ENST00000414786 RNF31Q96EP0 1072 aa18.78■□□□□ 0.6
SHANK3-202ENST00000414786 TMEM176AQ96HP8 235 aa18.78■□□□□ 0.6
SHANK3-202ENST00000414786 TEKT5Q96M29 485 aa18.78■□□□□ 0.6
SHANK3-202ENST00000414786 PLEKHF1Q96S99 279 aa18.78■□□□□ 0.6
SHANK3-202ENST00000414786 CHMP1AQ9HD42 196 aaPredicted RBP18.78■□□□□ 0.6
SHANK3-202ENST00000414786 VAPBO95292 243 aa18.78■□□□□ 0.6
SHANK3-202ENST00000414786 KLRK1P26718 216 aa18.78■□□□□ 0.6
SHANK3-202ENST00000414786 FOXM1Q08050 763 aa18.78■□□□□ 0.6
SHANK3-202ENST00000414786 CHERPQ8IWX8 916 aaKnown RBP18.78■□□□□ 0.6
SHANK3-202ENST00000414786 CENPIQ92674 756 aaPredicted RBP18.78■□□□□ 0.6
SHANK3-202ENST00000414786 SIRPGQ9P1W8 387 aa18.78■□□□□ 0.6
SHANK3-202ENST00000414786 MAST1Q9Y2H9 1570 aa18.78■□□□□ 0.6
SHANK3-202ENST00000414786 NAB2Q15742 525 aa18.77■□□□□ 0.6
SHANK3-202ENST00000414786 CYP2A13Q16696 494 aa18.77■□□□□ 0.6
SHANK3-202ENST00000414786 FAM98BQ52LJ0 330 aaKnown RBP18.77■□□□□ 0.6
SHANK3-202ENST00000414786 KBTBD2Q8IY47 623 aa18.77■□□□□ 0.6
SHANK3-202ENST00000414786 COMMD9Q9P000 198 aa18.77■□□□□ 0.6
SHANK3-202ENST00000414786 PGK1P00558 417 aa18.77■□□□□ 0.6
SHANK3-202ENST00000414786 THRAP10827 490 aa18.77■□□□□ 0.6
SHANK3-202ENST00000414786 CARTPTQ16568 116 aa18.77■□□□□ 0.6
SHANK3-202ENST00000414786 TBC1D25Q3MII6 688 aa18.77■□□□□ 0.6
SHANK3-202ENST00000414786 ARMC12Q5T9G4 340 aa18.77■□□□□ 0.6
SHANK3-202ENST00000414786 ZNF470Q6ECI4 717 aa18.77■□□□□ 0.6
SHANK3-202ENST00000414786 TRAPPC11Q7Z392 1133 aa18.77■□□□□ 0.6
SHANK3-202ENST00000414786 ADCY4Q8NFM4 1077 aa18.77■□□□□ 0.6
SHANK3-202ENST00000414786 OSBPL2Q9H1P3 480 aa18.77■□□□□ 0.6
SHANK3-202ENST00000414786 IMP3Q9NV31 184 aaKnown RBP18.77■□□□□ 0.6
SHANK3-202ENST00000414786 CDH9Q9ULB4 789 aa18.77■□□□□ 0.6
SHANK3-202ENST00000414786 UBDO15205 165 aa18.77■□□□□ 0.6
SHANK3-202ENST00000414786 GIMD1P0DJR0 217 aa18.77■□□□□ 0.6
SHANK3-202ENST00000414786 NDST1P52848 882 aa18.77■□□□□ 0.6
SHANK3-202ENST00000414786 KRT73Q86Y46 540 aa18.77■□□□□ 0.6
SHANK3-202ENST00000414786 TMEM132CQ8N3T6 1108 aa18.77■□□□□ 0.6
SHANK3-202ENST00000414786 LPPQ93052 612 aa18.77■□□□□ 0.6
SHANK3-202ENST00000414786 ADPRHL2Q9NX46 363 aa18.77■□□□□ 0.6
SHANK3-202ENST00000414786 ADGRL3Q9HAR2 1447 aa18.77■□□□□ 0.6
SHANK3-202ENST00000414786 OGTO15294 1046 aa18.77■□□□□ 0.6
SHANK3-202ENST00000414786 CALCAP01258 141 aa18.77■□□□□ 0.6
SHANK3-202ENST00000414786 RPL9P32969 192 aaKnown RBP18.77■□□□□ 0.6
SHANK3-202ENST00000414786 CRADDP78560 199 aa18.77■□□□□ 0.6
SHANK3-202ENST00000414786 ABATP80404 500 aa18.77■□□□□ 0.6
SHANK3-202ENST00000414786 LGALS3BPQ08380 585 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms